| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is cheA [H]
Identifier: 110680250
GI number: 110680250
Start: 2928050
End: 2930272
Strand: Direct
Name: cheA [H]
Synonym: RD1_3059
Alternate gene names: 110680250
Gene position: 2928050-2930272 (Clockwise)
Preceding gene: 110680249
Following gene: 110680251
Centisome position: 70.84
GC content: 52.36
Gene sequence:
>2223_bases ATGGCGGAAATCCGAGCGTCTTTCTTCATTGAATGCGAAGAACTACTGGAAGCGCTGCAGGATGGTCTCGAAGCTCTCAA TGACGGCGCGGGTGATCCTGAAACCATCAACGTTGTGTTCAGAGCGGTTCACTCCATCAAAGGCGGTGCCGGGGCATTTG GTCTGGAAGCGCTTGTCCGATTTGCGCATCGGTTCGAGACGGTGCTTGATGAAATCCGAGCTGGGCGCATGGTCGCGGAT GCGAATGCGCTCAAATTGTTTTTTCAATGCTCGGATCATCTCTCTGATCTCGTGCGCATCAGCCGTGACGCCGGCACGCT TCCGGAGGATGAAACCTCCAAGCTCCTTGCACTGTTGGATGAGTTGCTAGGCGAAAACGGCGCGATACCCGAAGAAGAGG AAGTCGAAGAGGAAATTGACTTTCAACCTGCCGCTTTATCGTTTGATCTCGATTTGGGTGATGCCGATGAGGGGGATGCT CTCGACCTGTTGCCGCCGTTGACTTTTGATGAAGACGAAGGCCCAAGAAGCTCCAGATATGAGATTACATTTAAACCGGA GAATGAGCTTTACGAAACAGGAAACGAACCTTTTCAAATCCTGCGCGCACTGGATGAAATGGGTGAGTGTAAAGTTACGT GCAAAACGGATCAGGTACCTGAACTGGCGAGCCTCGCCCCCGAAAATGCATATCTGTCATGGCACATTGAGCTTACAACG GATGTTGAAGAAGCTGAAATCTCGGCAGCATTTGAATTTGTAGAGGGACTTTGTCTCTTGGACATCAAGAGTGTCGACGA TGAAGACACGCAGGAAGAACAGAACGGCTCTGAAGACAGCACCGCCGACGCGGACCCGATCAGTGAATTGACCACACCGG CTGCCAAGGTGGAAGAAGTTTCGGAACCCGACCCCATTGCGGAACTCTCCAAACCAGCCCCAGAAGCAACAGAAAAGGTC GTGGCACCACAGAAAGCCGAACAGAAAACACCCACCCCGGCTGCACCGGCGAAATCAGTCGTTCGAGTGGATCTCGACAG AATTGAACGTTTGGTGAACCTTGTTGGCGAATTGGTAATCAATCAGGCGATGCTCTCGCAGAGCCTTGAAAGCTCGGGGT TATCTCCGCACTCAGACGCAATGAACGGGCTGGAAGAGTTTCAGCGACTGACCCGTGACATCCAGGACAGCGTGATGATG ATCCGCGCGCAGCCGGTTAAATCCCTCTTTCAACGCATGTCGAGAATCGTTCGAGAGTCATCGGCCGCCGTTGATAAAGA CGTCCGCCTTGTCACCAATGGCGAGGGAACCGAAGTCGATAAGACAGTTATCGAGCGTCTGGCCGATCCTCTTACGCATA TGATCAGGAATGCAGTTGATCATGGCCTGGAGACAACAGACGCGAGGCTTGCGGCTGGCAAACCAGCCCAAGGCCAGGTT AAACTTACGGCTGCACACAGATCCGGACGGGTGGTGATAGAAGTTGCCGATGATGGGGCTGGCATTAACCGCCCAAAGGT TTTGCAAATTGCTATCGACAAAGGGTTGATCCCCAAAGACGCATCGTTGTCTGAAAGTGAAATTGACAACTTGCTGTTCC TGCCGGGGTTTTCGACGGCGTCAGTTGTGTCAGACCTTTCAGGTCGTGGCGTGGGGATGGACGTTGTACGAACCGCGATT CAAGCTCTGGGCGGCCGCATCACGATTTCGTCGACACCGGGTTCAGGCACTACTTTTTCAATATCTTTGCCACTTACTCT GGCCGTCTTGGACGGAATGGTTGTTCAGGTTGCAGATGAGACCCTTGTCCTCCCCCTGAATGTGGTGATTGAAACGCTAA CACTCAGTAATGATGATGTTGAGATGGTCCGCCCCGGCGCAAACGTTGTCAGGGTAAGAAGTGGCTTTGTGCCTCTTTTC GATCTAGGCGAAGAACTGGGATACCGGGGCCCCATTGATGACTACGAAGGGTCAGTCGTCCTTTTGATCGCACATGAAGA CGAAAGCCGCGCTGCTCTCATAATCGATAGCATACAGGACCAGAGACAAGTCGTCATCAAGGGTTTGGATGACAGCTTCT ATCGCGCCCCTGGGATAGCCGCCGCTACTATTCTCGGAGATGGCCAGATCGCTCTGATTTTGGACACGTCAGACATTATC ACAAACGCAATCGGCTCAAACATATCTGGGCATAGTTCTACTGTATCAGGAGCAACATCATGA
Upstream 100 bases:
>100_bases CACCGGATGGATCGTGAAGCCGTTTGACCCCAACAAGCTGGTCAAAGCGCTCCAAATGGTTGCCGGGTAAGAGGCTGAAA TGACTGATTCAAATGATCCT
Downstream 100 bases:
>100_bases GTGAAAAAGATACGCCGGAGACTCTGGAACTCCTGACGTTCCAGCTCGCAGACCAAGAATACTCCCTGGATATCATGTCT GTAAGAGAAATTCGCGGTTG
Product: chemotaxis protein CheA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 740; Mature: 739
Protein sequence:
>740_residues MAEIRASFFIECEELLEALQDGLEALNDGAGDPETINVVFRAVHSIKGGAGAFGLEALVRFAHRFETVLDEIRAGRMVAD ANALKLFFQCSDHLSDLVRISRDAGTLPEDETSKLLALLDELLGENGAIPEEEEVEEEIDFQPAALSFDLDLGDADEGDA LDLLPPLTFDEDEGPRSSRYEITFKPENELYETGNEPFQILRALDEMGECKVTCKTDQVPELASLAPENAYLSWHIELTT DVEEAEISAAFEFVEGLCLLDIKSVDDEDTQEEQNGSEDSTADADPISELTTPAAKVEEVSEPDPIAELSKPAPEATEKV VAPQKAEQKTPTPAAPAKSVVRVDLDRIERLVNLVGELVINQAMLSQSLESSGLSPHSDAMNGLEEFQRLTRDIQDSVMM IRAQPVKSLFQRMSRIVRESSAAVDKDVRLVTNGEGTEVDKTVIERLADPLTHMIRNAVDHGLETTDARLAAGKPAQGQV KLTAAHRSGRVVIEVADDGAGINRPKVLQIAIDKGLIPKDASLSESEIDNLLFLPGFSTASVVSDLSGRGVGMDVVRTAI QALGGRITISSTPGSGTTFSISLPLTLAVLDGMVVQVADETLVLPLNVVIETLTLSNDDVEMVRPGANVVRVRSGFVPLF DLGEELGYRGPIDDYEGSVVLLIAHEDESRAALIIDSIQDQRQVVIKGLDDSFYRAPGIAAATILGDGQIALILDTSDII TNAIGSNISGHSSTVSGATS
Sequences:
>Translated_740_residues MAEIRASFFIECEELLEALQDGLEALNDGAGDPETINVVFRAVHSIKGGAGAFGLEALVRFAHRFETVLDEIRAGRMVAD ANALKLFFQCSDHLSDLVRISRDAGTLPEDETSKLLALLDELLGENGAIPEEEEVEEEIDFQPAALSFDLDLGDADEGDA LDLLPPLTFDEDEGPRSSRYEITFKPENELYETGNEPFQILRALDEMGECKVTCKTDQVPELASLAPENAYLSWHIELTT DVEEAEISAAFEFVEGLCLLDIKSVDDEDTQEEQNGSEDSTADADPISELTTPAAKVEEVSEPDPIAELSKPAPEATEKV VAPQKAEQKTPTPAAPAKSVVRVDLDRIERLVNLVGELVINQAMLSQSLESSGLSPHSDAMNGLEEFQRLTRDIQDSVMM IRAQPVKSLFQRMSRIVRESSAAVDKDVRLVTNGEGTEVDKTVIERLADPLTHMIRNAVDHGLETTDARLAAGKPAQGQV KLTAAHRSGRVVIEVADDGAGINRPKVLQIAIDKGLIPKDASLSESEIDNLLFLPGFSTASVVSDLSGRGVGMDVVRTAI QALGGRITISSTPGSGTTFSISLPLTLAVLDGMVVQVADETLVLPLNVVIETLTLSNDDVEMVRPGANVVRVRSGFVPLF DLGEELGYRGPIDDYEGSVVLLIAHEDESRAALIIDSIQDQRQVVIKGLDDSFYRAPGIAAATILGDGQIALILDTSDII TNAIGSNISGHSSTVSGATS >Mature_739_residues AEIRASFFIECEELLEALQDGLEALNDGAGDPETINVVFRAVHSIKGGAGAFGLEALVRFAHRFETVLDEIRAGRMVADA NALKLFFQCSDHLSDLVRISRDAGTLPEDETSKLLALLDELLGENGAIPEEEEVEEEIDFQPAALSFDLDLGDADEGDAL DLLPPLTFDEDEGPRSSRYEITFKPENELYETGNEPFQILRALDEMGECKVTCKTDQVPELASLAPENAYLSWHIELTTD VEEAEISAAFEFVEGLCLLDIKSVDDEDTQEEQNGSEDSTADADPISELTTPAAKVEEVSEPDPIAELSKPAPEATEKVV APQKAEQKTPTPAAPAKSVVRVDLDRIERLVNLVGELVINQAMLSQSLESSGLSPHSDAMNGLEEFQRLTRDIQDSVMMI RAQPVKSLFQRMSRIVRESSAAVDKDVRLVTNGEGTEVDKTVIERLADPLTHMIRNAVDHGLETTDARLAAGKPAQGQVK LTAAHRSGRVVIEVADDGAGINRPKVLQIAIDKGLIPKDASLSESEIDNLLFLPGFSTASVVSDLSGRGVGMDVVRTAIQ ALGGRITISSTPGSGTTFSISLPLTLAVLDGMVVQVADETLVLPLNVVIETLTLSNDDVEMVRPGANVVRVRSGFVPLFD LGEELGYRGPIDDYEGSVVLLIAHEDESRAALIIDSIQDQRQVVIKGLDDSFYRAPGIAAATILGDGQIALILDTSDIIT NAIGSNISGHSSTVSGATS
Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. CheA is autophosphorylated; it can transfer its phosphate group to either CheB or CheY [H]
COG id: COG0643
COG function: function code NT; Chemotaxis protein histidine kinase and related kinases
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HPt domain [H]
Homologues:
Organism=Escherichia coli, GI1788197, Length=399, Percent_Identity=45.1127819548872, Blast_Score=338, Evalue=7e-94,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR002545 - InterPro: IPR004358 - InterPro: IPR008207 - InterPro: IPR004105 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF01584 CheW; PF02895 H-kinase_dim; PF02518 HATPase_c; PF01627 Hpt [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 79542; Mature: 79411
Theoretical pI: Translated: 4.03; Mature: 4.03
Prosite motif: PS50851 CHEW ; PS50894 HPT ; PS00687 ALDEHYDE_DEHYDR_GLU ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEIRASFFIECEELLEALQDGLEALNDGAGDPETINVVFRAVHSIKGGAGAFGLEALVR CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHH FAHRFETVLDEIRAGRMVADANALKLFFQCSDHLSDLVRISRDAGTLPEDETSKLLALLD HHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH ELLGENGAIPEEEEVEEEIDFQPAALSFDLDLGDADEGDALDLLPPLTFDEDEGPRSSRY HHHCCCCCCCCHHHHHHHCCCCCCEEEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCEE EITFKPENELYETGNEPFQILRALDEMGECKVTCKTDQVPELASLAPENAYLSWHIELTT EEEECCCHHHHHCCCHHHHHHHHHHHCCCEEEEECCCCCCHHHHCCCCCCEEEEEEEEEC DVEEAEISAAFEFVEGLCLLDIKSVDDEDTQEEQNGSEDSTADADPISELTTPAAKVEEV CCHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHCCCCCCCCCCCCHHHHCCCHHHHHHC SEPDPIAELSKPAPEATEKVVAPQKAEQKTPTPAAPAKSVVRVDLDRIERLVNLVGELVI CCCCCHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH NQAMLSQSLESSGLSPHSDAMNGLEEFQRLTRDIQDSVMMIRAQPVKSLFQRMSRIVRES HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH SAAVDKDVRLVTNGEGTEVDKTVIERLADPLTHMIRNAVDHGLETTDARLAAGKPAQGQV HHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCEE KLTAAHRSGRVVIEVADDGAGINRPKVLQIAIDKGLIPKDASLSESEIDNLLFLPGFSTA EEEEECCCCEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHCCCEEEECCCCHH SVVSDLSGRGVGMDVVRTAIQALGGRITISSTPGSGTTFSISLPLTLAVLDGMVVQVADE HHHHHHCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCEEEEECCHHHHHHCCHHEEECCC TLVLPLNVVIETLTLSNDDVEMVRPGANVVRVRSGFVPLFDLGEELGYRGPIDDYEGSVV EEEEEHHHHHHHHCCCCCCCEEECCCCCEEEEECCCCCHHHHHHHCCCCCCCCCCCCCEE LLIAHEDESRAALIIDSIQDQRQVVIKGLDDSFYRAPGIAAATILGDGQIALILDTSDII EEEEECCCCCEEEEEHHHHHHHHHHHCCCCCHHHCCCCCEEEEEECCCEEEEEEECHHHH TNAIGSNISGHSSTVSGATS HHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure AEIRASFFIECEELLEALQDGLEALNDGAGDPETINVVFRAVHSIKGGAGAFGLEALVR CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHH FAHRFETVLDEIRAGRMVADANALKLFFQCSDHLSDLVRISRDAGTLPEDETSKLLALLD HHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH ELLGENGAIPEEEEVEEEIDFQPAALSFDLDLGDADEGDALDLLPPLTFDEDEGPRSSRY HHHCCCCCCCCHHHHHHHCCCCCCEEEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCEE EITFKPENELYETGNEPFQILRALDEMGECKVTCKTDQVPELASLAPENAYLSWHIELTT EEEECCCHHHHHCCCHHHHHHHHHHHCCCEEEEECCCCCCHHHHCCCCCCEEEEEEEEEC DVEEAEISAAFEFVEGLCLLDIKSVDDEDTQEEQNGSEDSTADADPISELTTPAAKVEEV CCHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHCCCCCCCCCCCCHHHHCCCHHHHHHC SEPDPIAELSKPAPEATEKVVAPQKAEQKTPTPAAPAKSVVRVDLDRIERLVNLVGELVI CCCCCHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH NQAMLSQSLESSGLSPHSDAMNGLEEFQRLTRDIQDSVMMIRAQPVKSLFQRMSRIVRES HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH SAAVDKDVRLVTNGEGTEVDKTVIERLADPLTHMIRNAVDHGLETTDARLAAGKPAQGQV HHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCEE KLTAAHRSGRVVIEVADDGAGINRPKVLQIAIDKGLIPKDASLSESEIDNLLFLPGFSTA EEEEECCCCEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHCCCEEEECCCCHH SVVSDLSGRGVGMDVVRTAIQALGGRITISSTPGSGTTFSISLPLTLAVLDGMVVQVADE HHHHHHCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCEEEEECCHHHHHHCCHHEEECCC TLVLPLNVVIETLTLSNDDVEMVRPGANVVRVRSGFVPLFDLGEELGYRGPIDDYEGSVV EEEEEHHHHHHHHCCCCCCCEEECCCCCEEEEECCCCCHHHHHHHCCCCCCCCCCCCCEE LLIAHEDESRAALIIDSIQDQRQVVIKGLDDSFYRAPGIAAATILGDGQIALILDTSDII EEEEECCCCCEEEEEHHHHHHHHHHHCCCCCHHHCCCCCEEEEEECCCEEEEEEECHHHH TNAIGSNISGHSSTVSGATS HHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7494484 [H]