Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is 110680206

Identifier: 110680206

GI number: 110680206

Start: 2886391

End: 2886690

Strand: Direct

Name: 110680206

Synonym: RD1_3010

Alternate gene names: NA

Gene position: 2886391-2886690 (Clockwise)

Preceding gene: 110680205

Following gene: 110680207

Centisome position: 69.84

GC content: 57.33

Gene sequence:

>300_bases
ATGAACCGCAGCACCCGTCCCGCATTTGGTACATTCATTTTCTTCACGCTCGCATTGGGCCTTGCGACCTATTTCACCTT
TGCCGCTGTGCAGGGCGATTTCGGTGTGTTCAAACGGGCCGAGATCACGGCGGAGGCAAATGTGCTGCGCCAGCAGTTGA
GTGCTGTGCAGGCGGATGTGCAGGAGATGGAGAACCTCACCCTGCGCCTGTCGGATGACTACCTCGATCTTGATCTGCTG
GATGAGCAAGTGCGACGCGTGTTAGGCATGATCCGCGCCGACGAAATCGTCATCCGCTAG

Upstream 100 bases:

>100_bases
CAGGATTTCGGTATTTTCGGATGAAATGGGATTCACAGGTGCACCGCCCTGTGTCATACTATGCGCACGCCCATCAAGAG
GCGGCCCAGAGGCAATACAC

Downstream 100 bases:

>100_bases
CGTTCAGGCTGCCCTTTTGCGGCAAAATGGCCAGAGTTTGTATTCAGTCTCGCAATACGCCACCGAATCCGATAATAGAT
AGTTTAATGCTAAACTATCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 99; Mature: 99

Protein sequence:

>99_residues
MNRSTRPAFGTFIFFTLALGLATYFTFAAVQGDFGVFKRAEITAEANVLRQQLSAVQADVQEMENLTLRLSDDYLDLDLL
DEQVRRVLGMIRADEIVIR

Sequences:

>Translated_99_residues
MNRSTRPAFGTFIFFTLALGLATYFTFAAVQGDFGVFKRAEITAEANVLRQQLSAVQADVQEMENLTLRLSDDYLDLDLL
DEQVRRVLGMIRADEIVIR
>Mature_99_residues
MNRSTRPAFGTFIFFTLALGLATYFTFAAVQGDFGVFKRAEITAEANVLRQQLSAVQADVQEMENLTLRLSDDYLDLDLL
DEQVRRVLGMIRADEIVIR

Specific function: Unknown

COG id: COG2919

COG function: function code D; Septum formation initiator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11219; Mature: 11219

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRSTRPAFGTFIFFTLALGLATYFTFAAVQGDFGVFKRAEITAEANVLRQQLSAVQADV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
QEMENLTLRLSDDYLDLDLLDEQVRRVLGMIRADEIVIR
HHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHEECC
>Mature Secondary Structure
MNRSTRPAFGTFIFFTLALGLATYFTFAAVQGDFGVFKRAEITAEANVLRQQLSAVQADV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
QEMENLTLRLSDDYLDLDLLDEQVRRVLGMIRADEIVIR
HHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA