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The map label for this gene is rssA [H]

Identifier: 110680144

GI number: 110680144

Start: 2822668

End: 2824032

Strand: Reverse

Name: rssA [H]

Synonym: RD1_2944

Alternate gene names: 110680144

Gene position: 2824032-2822668 (Counterclockwise)

Preceding gene: 110680145

Following gene: 110680143

Centisome position: 68.33

GC content: 61.03

Gene sequence:

>1365_bases
ATGTCTGAGGCGGTCCGCTCTTCGGCATCTCTGCGCCGCCGCCTGACGCTTGGCCTGATCGGCGGTGCGGCGGTGCTGGC
GGTTCTGATTTACCTGTTCACGCGCGCCTATGCGACACAGATTGCCCAGCAAGGTCAGGACAGCATCCTGAGTGCATCGG
TTTCTTCGATTCTGGATTCGGCGGTCATTCGCAATGGAAGTCTTGAGATTGACTTTCCTTATGCTGCGCTCGCCATGCTC
AACACCGATCTGGATGACCGGGTTTTCTACGCCATTTACCGCGATGACGTGCTGTTGTCGGGCTATCCGCTGCTGCCGCG
TCCTGCGCGCGCCGGTTTTGACGCCATATCCTGGACGGATGAGTTCAACGGCGCGCCGGTGCGGATCACGTCAGATGCGC
GCAGGCTTTTTGCGACCGACAGCGCGACGGTGATTTCGGTTTCGGTTGCGCAAACGCAGGATGCTCTGTCGGGCACTTTG
CGGGATATTTCCAATACCGTCGCACTGTTTGGGCTGGGGTTTTTTGCGATGGCGGCCGCCTTGTCCTTTTGGGTGACCTC
GGCCACCATCGGGCCGCTGAACCGGGTGACTTCATCCATCACACGGCGCGGCCCGCAAGACCTGAGCCCGGTTGAAAAGC
CGGTGCCCAAGGAAATGGTGCCTCTGGTGTCTTCGCTGAACAACCTGATGAGCCGACTGGATCAGTCGCTGCAACGCTCT
GAGGATTTCATCGCTGAGGCTGCGCACCGGGTCCGCACGCCGCTGGCCACCGTGCGCTCGCACGCCGAAGCAACCCTGCA
GCGCGTCGAAAAGGAAGAAAACCGCAAGGCGTTGCGCGCCATGGTGCGGGCGATTGACGAAAGCTCGCGCGCGGCGGGGC
AATTGCTGGATCATGCAATGATCACCTTTCGCGCCGACCATCTGGAACGGCAAAGCCTTGATCTGACAGCGCTTGTGGCC
GAACTGGTCAGCCGGCTGGAACCCGTGGCAGAGATGAAAGATATTACATTTCACGTGCAGGCGGAGCGTCAGGTGATTGT
TTTGGCGGATGCCATTCTGGTGCAAAACGCCATGCGCAACCTCATCGACAACGCGTTGAAATATGCCCCCGCCGAGAGCG
AGATCACCATCCGCGTTGATCAGGAATCTGCCGGTCGGGTGACGATCTGTGATCAGGGGCCGGGCTTTCCCTGCGATCAG
ATGGCGGGCCTTGTGGATCGCTTTGCACGTGGACGCAATGCGGTGGGGATCACCGGCTCCGGGCTGGGCCTGACCATCGC
GCAGGACGTCGCACAGGCCCACGGCGGGGCCTTGACCCTCAGCAACCGAAAGGAGGGGGGCGCATGCGTCACGCTCTCGT
TCTGA

Upstream 100 bases:

>100_bases
GACAATGCGATCGAGGTGTATGTCGGTCGCCTTCGTAAACATCTTGAGCCGTCGCAATTGCGGATCAAAACCTCGCGCGG
TTTGGGGTATAGTCTGGAAC

Downstream 100 bases:

>100_bases
CCCTGTGTTTGATCCTGTTTGGCACGGTCGCGCCCGCACGGGAATGGGAAGACAGACAGCGGTTTGGCGTAAGCGATGCG
CCGATCACGCTGCGAATTTT

Product: two-component sensor protein, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 454; Mature: 453

Protein sequence:

>454_residues
MSEAVRSSASLRRRLTLGLIGGAAVLAVLIYLFTRAYATQIAQQGQDSILSASVSSILDSAVIRNGSLEIDFPYAALAML
NTDLDDRVFYAIYRDDVLLSGYPLLPRPARAGFDAISWTDEFNGAPVRITSDARRLFATDSATVISVSVAQTQDALSGTL
RDISNTVALFGLGFFAMAAALSFWVTSATIGPLNRVTSSITRRGPQDLSPVEKPVPKEMVPLVSSLNNLMSRLDQSLQRS
EDFIAEAAHRVRTPLATVRSHAEATLQRVEKEENRKALRAMVRAIDESSRAAGQLLDHAMITFRADHLERQSLDLTALVA
ELVSRLEPVAEMKDITFHVQAERQVIVLADAILVQNAMRNLIDNALKYAPAESEITIRVDQESAGRVTICDQGPGFPCDQ
MAGLVDRFARGRNAVGITGSGLGLTIAQDVAQAHGGALTLSNRKEGGACVTLSF

Sequences:

>Translated_454_residues
MSEAVRSSASLRRRLTLGLIGGAAVLAVLIYLFTRAYATQIAQQGQDSILSASVSSILDSAVIRNGSLEIDFPYAALAML
NTDLDDRVFYAIYRDDVLLSGYPLLPRPARAGFDAISWTDEFNGAPVRITSDARRLFATDSATVISVSVAQTQDALSGTL
RDISNTVALFGLGFFAMAAALSFWVTSATIGPLNRVTSSITRRGPQDLSPVEKPVPKEMVPLVSSLNNLMSRLDQSLQRS
EDFIAEAAHRVRTPLATVRSHAEATLQRVEKEENRKALRAMVRAIDESSRAAGQLLDHAMITFRADHLERQSLDLTALVA
ELVSRLEPVAEMKDITFHVQAERQVIVLADAILVQNAMRNLIDNALKYAPAESEITIRVDQESAGRVTICDQGPGFPCDQ
MAGLVDRFARGRNAVGITGSGLGLTIAQDVAQAHGGALTLSNRKEGGACVTLSF
>Mature_453_residues
SEAVRSSASLRRRLTLGLIGGAAVLAVLIYLFTRAYATQIAQQGQDSILSASVSSILDSAVIRNGSLEIDFPYAALAMLN
TDLDDRVFYAIYRDDVLLSGYPLLPRPARAGFDAISWTDEFNGAPVRITSDARRLFATDSATVISVSVAQTQDALSGTLR
DISNTVALFGLGFFAMAAALSFWVTSATIGPLNRVTSSITRRGPQDLSPVEKPVPKEMVPLVSSLNNLMSRLDQSLQRSE
DFIAEAAHRVRTPLATVRSHAEATLQRVEKEENRKALRAMVRAIDESSRAAGQLLDHAMITFRADHLERQSLDLTALVAE
LVSRLEPVAEMKDITFHVQAERQVIVLADAILVQNAMRNLIDNALKYAPAESEITIRVDQESAGRVTICDQGPGFPCDQM
AGLVDRFARGRNAVGITGSGLGLTIAQDVAQAHGGALTLSNRKEGGACVTLSF

Specific function: Member of the two-component regulatory system rssA/rssB involved in regulation of swarming motility which has been shown to be inhibited by saturated fatty acids. RssA/rssB regulates cellular fatty acid composition, hemolysin production and cell surface t

COG id: COG0642

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1788279, Length=317, Percent_Identity=27.4447949526814, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI1786912, Length=216, Percent_Identity=31.0185185185185, Blast_Score=102, Evalue=4e-23,
Organism=Escherichia coli, GI1789403, Length=284, Percent_Identity=30.6338028169014, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1790551, Length=293, Percent_Identity=27.9863481228669, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1786783, Length=268, Percent_Identity=27.2388059701493, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1790861, Length=296, Percent_Identity=30.7432432432432, Blast_Score=86, Evalue=5e-18,
Organism=Escherichia coli, GI1788393, Length=271, Percent_Identity=25.4612546125461, Blast_Score=83, Evalue=3e-17,
Organism=Escherichia coli, GI1786600, Length=204, Percent_Identity=26.9607843137255, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1788549, Length=214, Percent_Identity=25.2336448598131, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI48994928, Length=221, Percent_Identity=24.4343891402715, Blast_Score=69, Evalue=7e-13,
Organism=Escherichia coli, GI87082128, Length=313, Percent_Identity=25.2396166134185, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1790436, Length=229, Percent_Identity=22.2707423580786, Blast_Score=65, Evalue=8e-12,
Organism=Escherichia coli, GI1787374, Length=239, Percent_Identity=25.5230125523013, Blast_Score=65, Evalue=8e-12,
Organism=Escherichia coli, GI1790346, Length=245, Percent_Identity=24.4897959183673, Blast_Score=62, Evalue=6e-11,
Organism=Escherichia coli, GI1788713, Length=220, Percent_Identity=24.5454545454545, Blast_Score=62, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 48998; Mature: 48867

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEAVRSSASLRRRLTLGLIGGAAVLAVLIYLFTRAYATQIAQQGQDSILSASVSSILDS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
AVIRNGSLEIDFPYAALAMLNTDLDDRVFYAIYRDDVLLSGYPLLPRPARAGFDAISWTD
HHHCCCCEEEECCHHHHHHHCCCCCHHEEEEEEECCEEECCCCCCCCCCCCCCCCCCCCC
EFNGAPVRITSDARRLFATDSATVISVSVAQTQDALSGTLRDISNTVALFGLGFFAMAAA
CCCCCCEEEEHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSFWVTSATIGPLNRVTSSITRRGPQDLSPVEKPVPKEMVPLVSSLNNLMSRLDQSLQRS
HHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
EDFIAEAAHRVRTPLATVRSHAEATLQRVEKEENRKALRAMVRAIDESSRAAGQLLDHAM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ITFRADHLERQSLDLTALVAELVSRLEPVAEMKDITFHVQAERQVIVLADAILVQNAMRN
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCEEEEECCCEEEEHHHHHHHHHHHHH
LIDNALKYAPAESEITIRVDQESAGRVTICDQGPGFPCDQMAGLVDRFARGRNAVGITGS
HHHHHHHCCCCCCCEEEEECCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEECCC
GLGLTIAQDVAQAHGGALTLSNRKEGGACVTLSF
CCCHHHHHHHHHHCCCEEEECCCCCCCEEEEEEC
>Mature Secondary Structure 
SEAVRSSASLRRRLTLGLIGGAAVLAVLIYLFTRAYATQIAQQGQDSILSASVSSILDS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
AVIRNGSLEIDFPYAALAMLNTDLDDRVFYAIYRDDVLLSGYPLLPRPARAGFDAISWTD
HHHCCCCEEEECCHHHHHHHCCCCCHHEEEEEEECCEEECCCCCCCCCCCCCCCCCCCCC
EFNGAPVRITSDARRLFATDSATVISVSVAQTQDALSGTLRDISNTVALFGLGFFAMAAA
CCCCCCEEEEHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSFWVTSATIGPLNRVTSSITRRGPQDLSPVEKPVPKEMVPLVSSLNNLMSRLDQSLQRS
HHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
EDFIAEAAHRVRTPLATVRSHAEATLQRVEKEENRKALRAMVRAIDESSRAAGQLLDHAM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ITFRADHLERQSLDLTALVAELVSRLEPVAEMKDITFHVQAERQVIVLADAILVQNAMRN
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCEEEEECCCEEEEHHHHHHHHHHHHH
LIDNALKYAPAESEITIRVDQESAGRVTICDQGPGFPCDQMAGLVDRFARGRNAVGITGS
HHHHHHHCCCCCCCEEEEECCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEECCC
GLGLTIAQDVAQAHGGALTLSNRKEGGACVTLSF
CCCHHHHHHHHHHCCCEEEECCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA