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The map label for this gene is fabD

Identifier: 110680126

GI number: 110680126

Start: 2800286

End: 2801329

Strand: Reverse

Name: fabD

Synonym: RD1_2925

Alternate gene names: NA

Gene position: 2801329-2800286 (Counterclockwise)

Preceding gene: 110680127

Following gene: 110680124

Centisome position: 67.78

GC content: 63.12

Gene sequence:

>1044_bases
ATGAGCAAAACCGCCGTTGTGATTTGCCCCGGTCGCGGCACCTATACGAAATCCGAACTGGGATACCTTGCGCGCCATCA
CGGTGACGCCATGGCGCACCTCGCGGCCTTTGACCGCGAAAGGGCCGCGCTCGGTCAGCAGACGCTGGCTGATCTCGATG
GTGCCGCGCGCTATCAGACGGCCGTTCACACGCGGGGTGACAATGCCTCGGCGCTGATCTATGCCGCATCGTTTCTCGAC
GCGCAGAAGATACCGGAGCAGATCGAAGTGGTCGGTGTGACCGGCAATTCGATGGGGTGGTATTCGGCGCTTGCTGTTTC
CGGGGCGGCGACCCCTGAAAATGCCTTCAGGATCGTCAACACCATGGGCACGCTGATGCAGGACAGCATGATCGGCGGGC
AAAGCCTTTATCCATTTGTGGATGAGAACTGGCGGCAGATACCGGGATTGCGGGACAGATTGCTGGCGCAGGTCGCAGAG
ATCGACCATCGTCCCGATCACCGCCTTGCGGTCTCCATCCATCTGGGCGGCATGCTGGTCGTCGCGGGGAATGACGCCGG
TCTGTCCGCGTTTGAACAAAGTGTTACACCGGTGCAGGGGCGCTTTCCGATGCGGCTTGCAAACCACGCCGCCTTTCACA
CCGCCCTGCAGGAACCTGTCGCGGCGCAGGGGCGTGCTGTTCTCGGCGCGGCACTGTTCCAGCCGCCGCGGCGTCCCCTG
ATCGACGGGCGCGGGGCCGTGTGGTATCCCAAGGCCTGCACGATTGAAGCCCTGCGCGCCTATACCCTCGGCCATCAGGT
GGTTGCCCCTTACGATTTCACCAGTGCCATCACGGTTGCCGCGCGCACATTCGCGCCGGATTTGTTCATCATTACAGGTC
CGGGCACCACGCTCGGCGGGGCGGTTGCGCAGGCGCTGATCTCGATCGAGTGGCAGGGGATGACGAGCAAGGAAGACTTC
CAGAGCCGCCAGCGCAGCGCCCCGGTGCTTCTGTCCATGGGACTGGATGCGGATCGTGCGCGCCTGATGTGCGCGGATTT
TTGA

Upstream 100 bases:

>100_bases
CAGAGGATTGTTTTATCGCAACCGGGCCTGCCTATGCGGCGACGCTGCCTTCGGTCGAGGGGATCGTGTCTGCGGCACTC
GAACTGGCGCAGGGTGCATC

Downstream 100 bases:

>100_bases
AACGCTGCTAGGTCGTACAGACCTGACATGTGTCACGCTTTGCCAGCGAAATGGCGCAGTCCGTGCGGCGGATCTGGTGG
TCTTCCTGCACAATGGACTG

Product: malonyl CoA-acyl carrier protein transacylase, putative

Products: NA

Alternate protein names: Acyl-Carrier Domain Protein; Malonyl CoA-Acyl Carrier Protein Transacylase; (Acyl-Carrier-Protein) S-Malonyltransferase-Like Protein; Acyl-Carrier Domain-Containing Protein; Malonyl-CoA-[Acyl-Carrier-Protein] Transacylase; Acyl-Carrier Protein

Number of amino acids: Translated: 347; Mature: 346

Protein sequence:

>347_residues
MSKTAVVICPGRGTYTKSELGYLARHHGDAMAHLAAFDRERAALGQQTLADLDGAARYQTAVHTRGDNASALIYAASFLD
AQKIPEQIEVVGVTGNSMGWYSALAVSGAATPENAFRIVNTMGTLMQDSMIGGQSLYPFVDENWRQIPGLRDRLLAQVAE
IDHRPDHRLAVSIHLGGMLVVAGNDAGLSAFEQSVTPVQGRFPMRLANHAAFHTALQEPVAAQGRAVLGAALFQPPRRPL
IDGRGAVWYPKACTIEALRAYTLGHQVVAPYDFTSAITVAARTFAPDLFIITGPGTTLGGAVAQALISIEWQGMTSKEDF
QSRQRSAPVLLSMGLDADRARLMCADF

Sequences:

>Translated_347_residues
MSKTAVVICPGRGTYTKSELGYLARHHGDAMAHLAAFDRERAALGQQTLADLDGAARYQTAVHTRGDNASALIYAASFLD
AQKIPEQIEVVGVTGNSMGWYSALAVSGAATPENAFRIVNTMGTLMQDSMIGGQSLYPFVDENWRQIPGLRDRLLAQVAE
IDHRPDHRLAVSIHLGGMLVVAGNDAGLSAFEQSVTPVQGRFPMRLANHAAFHTALQEPVAAQGRAVLGAALFQPPRRPL
IDGRGAVWYPKACTIEALRAYTLGHQVVAPYDFTSAITVAARTFAPDLFIITGPGTTLGGAVAQALISIEWQGMTSKEDF
QSRQRSAPVLLSMGLDADRARLMCADF
>Mature_346_residues
SKTAVVICPGRGTYTKSELGYLARHHGDAMAHLAAFDRERAALGQQTLADLDGAARYQTAVHTRGDNASALIYAASFLDA
QKIPEQIEVVGVTGNSMGWYSALAVSGAATPENAFRIVNTMGTLMQDSMIGGQSLYPFVDENWRQIPGLRDRLLAQVAEI
DHRPDHRLAVSIHLGGMLVVAGNDAGLSAFEQSVTPVQGRFPMRLANHAAFHTALQEPVAAQGRAVLGAALFQPPRRPLI
DGRGAVWYPKACTIEALRAYTLGHQVVAPYDFTSAITVAARTFAPDLFIITGPGTTLGGAVAQALISIEWQGMTSKEDFQ
SRQRSAPVLLSMGLDADRARLMCADF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37217; Mature: 37086

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKTAVVICPGRGTYTKSELGYLARHHGDAMAHLAAFDRERAALGQQTLADLDGAARYQT
CCCCEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
AVHTRGDNASALIYAASFLDAQKIPEQIEVVGVTGNSMGWYSALAVSGAATPENAFRIVN
HEEECCCCCCEEEEEHHHHHHHHCCCEEEEEEEECCCCCHHHHHEECCCCCCHHHHHHHH
TMGTLMQDSMIGGQSLYPFVDENWRQIPGLRDRLLAQVAEIDHRPDHRLAVSIHLGGMLV
HHHHHHHHHHCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCEEE
VAGNDAGLSAFEQSVTPVQGRFPMRLANHAAFHTALQEPVAAQGRAVLGAALFQPPRRPL
EECCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHCCCHHHHHHHCCCCCCCC
IDGRGAVWYPKACTIEALRAYTLGHQVVAPYDFTSAITVAARTFAPDLFIITGPGTTLGG
CCCCCCEECCCHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCHHH
AVAQALISIEWQGMTSKEDFQSRQRSAPVLLSMGLDADRARLMCADF
HHHHHHHEEEECCCCCHHHHHHHHCCCCEEEEECCCCCHHEEEEECC
>Mature Secondary Structure 
SKTAVVICPGRGTYTKSELGYLARHHGDAMAHLAAFDRERAALGQQTLADLDGAARYQT
CCCEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
AVHTRGDNASALIYAASFLDAQKIPEQIEVVGVTGNSMGWYSALAVSGAATPENAFRIVN
HEEECCCCCCEEEEEHHHHHHHHCCCEEEEEEEECCCCCHHHHHEECCCCCCHHHHHHHH
TMGTLMQDSMIGGQSLYPFVDENWRQIPGLRDRLLAQVAEIDHRPDHRLAVSIHLGGMLV
HHHHHHHHHHCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCEEE
VAGNDAGLSAFEQSVTPVQGRFPMRLANHAAFHTALQEPVAAQGRAVLGAALFQPPRRPL
EECCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHCCCHHHHHHHCCCCCCCC
IDGRGAVWYPKACTIEALRAYTLGHQVVAPYDFTSAITVAARTFAPDLFIITGPGTTLGG
CCCCCCEECCCHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCHHH
AVAQALISIEWQGMTSKEDFQSRQRSAPVLLSMGLDADRARLMCADF
HHHHHHHEEEECCCCCHHHHHHHHCCCCEEEEECCCCCHHEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA