Click here to switch to the map view.

The map label for this gene is 110680124

Identifier: 110680124

GI number: 110680124

Start: 2797637

End: 2799148

Strand: Reverse

Name: 110680124

Synonym: RD1_2922

Alternate gene names: NA

Gene position: 2799148-2797637 (Counterclockwise)

Preceding gene: 110680126

Following gene: 110680123

Centisome position: 67.73

GC content: 59.26

Gene sequence:

>1512_bases
ATGGAGTTCATCTTCTATTTCGGTGACGTGTTCACGCCGGTCAACTTTGCGTTGTTGCTGCTGGGCACGATTGGGGGGCT
TGTGCTTGGCGCGACGCCGGGCCTGTCCCCGACCATGGCCGTTGCCTTGCTGATCCCCTTCACCTTTCAACTGGATGCGA
CGCAGGGTCTGATCCTACTGGGTGCCGCCTATACATCAACGGTTGCGGGGGGCGCGGTTTCGGCCATTCTGCTCAAGATT
CCCGGGGCACCGGCCAATATCGCAACCACGCTGGACGGCCACACGATGGCGCAGAATGGCGAGGGCACCAAGGCCTTGCA
GCTTAGTTTCCTCTCCTCTGCCGTGGGGGGCATTTTCGGGGTCCTGCTGTTGATCTTTCTCACGCCGGTTCTGGCCAAAT
GGGCCCTGGCCTTCGGGCCGTCACATCTGTTCTGGCTGGCCATTCTGGGGGTCACTGTCATCGGAACGCTCGACAGTAAA
TCGGTGGTCAAGGGATTGTTGTCGGGCTGTATCGGTCTGTGGCTGGCCACCATCGGGTTTGACGATATCATGGGGGCGCA
GCGGTTCATCTTTCATGATGCGCTTGGCGGCGGGATCAACATCATCGCAGCCCTGATCGGGCTGTTTGCGATCCCGCAGG
TGATTACCATGTTTGCACAGGGTCGCCGGGATGCGGGCACCGAAGTCATGCAGGTGCAAAAACACGCCGTGCTCGCGGCC
CTGCGCGCCTTGCTGAAATACCCGCGCGCGATGTTTATCGGCATGTCTACAGGATCGATCATCGGCCTTATCCCCGGTGT
CGGCGGGCAGATCGCCGGGTTGGTGTCCTATGATCAGGCCAAGAAGTTTTCGCCGGAGCGCGAGAGGTTCGGCAAGGGTC
ACCCCGAAGGCGTGATTGCGGCTGAGTCTGCCAATAATGCAATGGTCGGCCCCTCGCTTGTCCCGCTGCTGACCCTGTCC
ATTCCCGGATCACCTACCGCTGCGGTGCTTTTGGGCGGGCTTTTGATCCATGGAATTTTCCCCGGATCGGACCTTGTTGA
CAATCACCCGGATGTCGCGTGGACGTTCATCAATTCGATGCTGATCGGGCAGGTGCTGATGTGCATCTTTGGCCTTTATG
TGGCAGGGCTTGCGGCACGTGTCGCTCAGGTGCCGCAGTCGCTGATGGCGGCGGTCGTTCTGGGGCTTGCGCTCTTTGGC
AGCTATTCGGTGCAGTCCAGCATGGGCGATGTCTATGTCATGGCGGCCTTGGGCATCATGATGTATTTCCTGGAACGGTT
CGGCTTTTCGGCGGCCCCGCTGGTGCTGGGCCTGATCCTCGGTCCGATTGCTGAATCCAACTTTATCCAAGGGTCGATGA
TTGCCAATGCTACCGATGGGCTGGGGCCTTATTTCCTGGGTGGTCCGCTGAACCTGTTCCTGATCGCCACCGTGATCGCG
TCCATCGCTTATTCCGCATGGATGGAGATCCGCAATCGGCGATACGTCTCGAAAGAGGAGATCATGGTATGA

Upstream 100 bases:

>100_bases
TAGAACACCCGAACGTCACGGTTTATGAAAACATTTGCAATACTATTTTCATCCCCTAACCTCGAAGGTCAAGATCATCC
TGACGGGAGGGGAGGCCTGA

Downstream 100 bases:

>100_bases
GCGACATCAATCTGCCGCGTGTCCAGCATATTGTCGCTTCAGGCTGCGTTGTGGGTGTGGGGCTGTGGGTCACATACCTC
AGCTACACCCAGCAGCCGGC

Product: integral membrane protein, putative

Products: NA

Alternate protein names: ORFZ2 [H]

Number of amino acids: Translated: 503; Mature: 503

Protein sequence:

>503_residues
MEFIFYFGDVFTPVNFALLLLGTIGGLVLGATPGLSPTMAVALLIPFTFQLDATQGLILLGAAYTSTVAGGAVSAILLKI
PGAPANIATTLDGHTMAQNGEGTKALQLSFLSSAVGGIFGVLLLIFLTPVLAKWALAFGPSHLFWLAILGVTVIGTLDSK
SVVKGLLSGCIGLWLATIGFDDIMGAQRFIFHDALGGGINIIAALIGLFAIPQVITMFAQGRRDAGTEVMQVQKHAVLAA
LRALLKYPRAMFIGMSTGSIIGLIPGVGGQIAGLVSYDQAKKFSPERERFGKGHPEGVIAAESANNAMVGPSLVPLLTLS
IPGSPTAAVLLGGLLIHGIFPGSDLVDNHPDVAWTFINSMLIGQVLMCIFGLYVAGLAARVAQVPQSLMAAVVLGLALFG
SYSVQSSMGDVYVMAALGIMMYFLERFGFSAAPLVLGLILGPIAESNFIQGSMIANATDGLGPYFLGGPLNLFLIATVIA
SIAYSAWMEIRNRRYVSKEEIMV

Sequences:

>Translated_503_residues
MEFIFYFGDVFTPVNFALLLLGTIGGLVLGATPGLSPTMAVALLIPFTFQLDATQGLILLGAAYTSTVAGGAVSAILLKI
PGAPANIATTLDGHTMAQNGEGTKALQLSFLSSAVGGIFGVLLLIFLTPVLAKWALAFGPSHLFWLAILGVTVIGTLDSK
SVVKGLLSGCIGLWLATIGFDDIMGAQRFIFHDALGGGINIIAALIGLFAIPQVITMFAQGRRDAGTEVMQVQKHAVLAA
LRALLKYPRAMFIGMSTGSIIGLIPGVGGQIAGLVSYDQAKKFSPERERFGKGHPEGVIAAESANNAMVGPSLVPLLTLS
IPGSPTAAVLLGGLLIHGIFPGSDLVDNHPDVAWTFINSMLIGQVLMCIFGLYVAGLAARVAQVPQSLMAAVVLGLALFG
SYSVQSSMGDVYVMAALGIMMYFLERFGFSAAPLVLGLILGPIAESNFIQGSMIANATDGLGPYFLGGPLNLFLIATVIA
SIAYSAWMEIRNRRYVSKEEIMV
>Mature_503_residues
MEFIFYFGDVFTPVNFALLLLGTIGGLVLGATPGLSPTMAVALLIPFTFQLDATQGLILLGAAYTSTVAGGAVSAILLKI
PGAPANIATTLDGHTMAQNGEGTKALQLSFLSSAVGGIFGVLLLIFLTPVLAKWALAFGPSHLFWLAILGVTVIGTLDSK
SVVKGLLSGCIGLWLATIGFDDIMGAQRFIFHDALGGGINIIAALIGLFAIPQVITMFAQGRRDAGTEVMQVQKHAVLAA
LRALLKYPRAMFIGMSTGSIIGLIPGVGGQIAGLVSYDQAKKFSPERERFGKGHPEGVIAAESANNAMVGPSLVPLLTLS
IPGSPTAAVLLGGLLIHGIFPGSDLVDNHPDVAWTFINSMLIGQVLMCIFGLYVAGLAARVAQVPQSLMAAVVLGLALFG
SYSVQSSMGDVYVMAALGIMMYFLERFGFSAAPLVLGLILGPIAESNFIQGSMIANATDGLGPYFLGGPLNLFLIATVIA
SIAYSAWMEIRNRRYVSKEEIMV

Specific function: Unknown

COG id: COG3333

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002823 [H]

Pfam domain/function: PF01970 DUF112 [H]

EC number: NA

Molecular weight: Translated: 52496; Mature: 52496

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFIFYFGDVFTPVNFALLLLGTIGGLVLGATPGLSPTMAVALLIPFTFQLDATQGLILL
CCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHEEECCCCCEEEE
GAAYTSTVAGGAVSAILLKIPGAPANIATTLDGHTMAQNGEGTKALQLSFLSSAVGGIFG
EHHHHHHHCCHHHHHHHEECCCCCCCCEEECCCCEECCCCCCCHHHHHHHHHHHHHHHHH
VLLLIFLTPVLAKWALAFGPSHLFWLAILGVTVIGTLDSKSVVKGLLSGCIGLWLATIGF
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCH
DDIMGAQRFIFHDALGGGINIIAALIGLFAIPQVITMFAQGRRDAGTEVMQVQKHAVLAA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
LRALLKYPRAMFIGMSTGSIIGLIPGVGGQIAGLVSYDQAKKFSPERERFGKGHPEGVIA
HHHHHHCCHHEEEECCCCCEEEECCCCCCHHHHHHHHHHHHCCCCHHHHCCCCCCCCEEE
AESANNAMVGPSLVPLLTLSIPGSPTAAVLLGGLLIHGIFPGSDLVDNHPDVAWTFINSM
ECCCCCCCCCCCHHHHEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
LIGQVLMCIFGLYVAGLAARVAQVPQSLMAAVVLGLALFGSYSVQSSMGDVYVMAALGIM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHH
MYFLERFGFSAAPLVLGLILGPIAESNFIQGSMIANATDGLGPYFLGGPLNLFLIATVIA
HHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHH
SIAYSAWMEIRNRRYVSKEEIMV
HHHHHHHHHHHHCCCCCHHHCCC
>Mature Secondary Structure
MEFIFYFGDVFTPVNFALLLLGTIGGLVLGATPGLSPTMAVALLIPFTFQLDATQGLILL
CCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHEEECCCCCEEEE
GAAYTSTVAGGAVSAILLKIPGAPANIATTLDGHTMAQNGEGTKALQLSFLSSAVGGIFG
EHHHHHHHCCHHHHHHHEECCCCCCCCEEECCCCEECCCCCCCHHHHHHHHHHHHHHHHH
VLLLIFLTPVLAKWALAFGPSHLFWLAILGVTVIGTLDSKSVVKGLLSGCIGLWLATIGF
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCH
DDIMGAQRFIFHDALGGGINIIAALIGLFAIPQVITMFAQGRRDAGTEVMQVQKHAVLAA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
LRALLKYPRAMFIGMSTGSIIGLIPGVGGQIAGLVSYDQAKKFSPERERFGKGHPEGVIA
HHHHHHCCHHEEEECCCCCEEEECCCCCCHHHHHHHHHHHHCCCCHHHHCCCCCCCCEEE
AESANNAMVGPSLVPLLTLSIPGSPTAAVLLGGLLIHGIFPGSDLVDNHPDVAWTFINSM
ECCCCCCCCCCCHHHHEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
LIGQVLMCIFGLYVAGLAARVAQVPQSLMAAVVLGLALFGSYSVQSSMGDVYVMAALGIM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHH
MYFLERFGFSAAPLVLGLILGPIAESNFIQGSMIANATDGLGPYFLGGPLNLFLIATVIA
HHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHH
SIAYSAWMEIRNRRYVSKEEIMV
HHHHHHHHHHHHCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8672817 [H]