Click here to switch to the map view.

The map label for this gene is 110680108

Identifier: 110680108

GI number: 110680108

Start: 2784137

End: 2784334

Strand: Direct

Name: 110680108

Synonym: RD1_2905

Alternate gene names: NA

Gene position: 2784137-2784334 (Clockwise)

Preceding gene: 110680105

Following gene: 110680109

Centisome position: 67.36

GC content: 56.06

Gene sequence:

>198_bases
ATGAACGAAGACTTCAACATGTCCATGCGCAAATTCCTCAAGCAGGTTGGCGTCACATCCCAGCAGGCCATCGAAGAAGG
CATGCGCAATGCCGCGGACACGGGCGGCAAGACCTTTGAAGCCAAGGTCGTTCTGACCGTGGATGGTCTGGACATCGAAC
ATGTGGTCACTGGCCAGATCACCGGTTCCGCAGACTGA

Upstream 100 bases:

>100_bases
GCTTTCAAATGGCTGATCCTTTGGCTTTTTCCGTAGGGTCCATCTAAAAGCCCCCTCACACAAGCGTCAAGCACTACACA
TCCACCCAAGGAGAGATAGA

Downstream 100 bases:

>100_bases
TGAGCCTGACACGTGATGCGGTTCTGGCCGCTTTGAAAACAGTGTCGGACCCCATATCCGACAGCGACATCGTGGCCGCG
GGTCTGGTCAAGGCCCTGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 65; Mature: 65

Protein sequence:

>65_residues
MNEDFNMSMRKFLKQVGVTSQQAIEEGMRNAADTGGKTFEAKVVLTVDGLDIEHVVTGQITGSAD

Sequences:

>Translated_65_residues
MNEDFNMSMRKFLKQVGVTSQQAIEEGMRNAADTGGKTFEAKVVLTVDGLDIEHVVTGQITGSAD
>Mature_65_residues
MNEDFNMSMRKFLKQVGVTSQQAIEEGMRNAADTGGKTFEAKVVLTVDGLDIEHVVTGQITGSAD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7018; Mature: 7018

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.2 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEDFNMSMRKFLKQVGVTSQQAIEEGMRNAADTGGKTFEAKVVLTVDGLDIEHVVTGQI
CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCEEEEEEE
TGSAD
CCCCC
>Mature Secondary Structure
MNEDFNMSMRKFLKQVGVTSQQAIEEGMRNAADTGGKTFEAKVVLTVDGLDIEHVVTGQI
CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCEEEEEEE
TGSAD
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA