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The map label for this gene is 110680105

Identifier: 110680105

GI number: 110680105

Start: 2781358

End: 2783313

Strand: Direct

Name: 110680105

Synonym: RD1_2902

Alternate gene names: NA

Gene position: 2781358-2783313 (Clockwise)

Preceding gene: 110680097

Following gene: 110680108

Centisome position: 67.29

GC content: 62.42

Gene sequence:

>1956_bases
ATGACCAAAACGCTTGTCGTATGCGACTGCCTTGGCAGCCAGTCCATTGACGTCGACGCATTGGAGGCGGGCACCGGCTT
TGCCTGCTCCAAGGTTTTTTCCGATGCATGTGGCAGTCAGATCGAACAGACGGCAAAGCTGATCGCTGCGGGCGATACCG
TGGTGGCCTGCCAGCAGCAGGCACGGCTCTTTACCGAACTGGCCGAAGAGATTGAGGCAGAAACACCGGGTTTTGTCGAC
ATCCGCGATCGCGCCGGATGGACCGCAGCGGGACAGGACCCGACCCCCAAGTTGGCGGCCCTCGTGGCAGAGGCGCTGGT
GCCGGTGCCCTCCGAAAAGACAGTGGATATCATCTCCCACGGGACCTGTCTGGTGATCGGGGATACTGATGCGGCACTGA
ATGCGGCGCGTGATCTGAGCGACACGCTGGCCGTTACTTTGCTGACGTCGACGCCGGGTGACGCAGAACAAGAAAGCGCC
TTTGAAATCGTGTCGGGGCGATTGGCCCGCGCGCAGGGCAGCCTTGGCCAGTTTGATCTGCGGATCGACGGTTTTCAGCA
GATGATCGCCGGAGGCCGGGGCAGCGCCACCTGGACAGAACCGAAAGACGCCGCGCGGTCGTCTTGCGATATCATTGTGG
ATTTGTCAGGCGGCACGTCGCTGTTTCCCGCGCCAGCCAAGCGGGATGGCTACCTGCGCGCCGACCCCGGCAGTGCCCCT
GCCGTGGCCAAGGTCGTTTTCGCCGCGGCGCAGTTGATCGGCACCTTCGAAAAGCCGCTTTACGTGCGGTTGGAAGAACC
GATCTGCGCCCATTCGCGCGCCGGGCAATCCGCCTGCAGCAAATGTCTGGATGTGTGCCCGACCGGGGCCATCACATCTG
CGGGGGAGCATGTGGCGATTGATCCGTTGATCTGTGCAGGCTGCGGCGCCTGTTCCGCGCTTTGTCCTTCTGGAGCGATC
ACATATGATGCGCCACCTGTCGGGTCGGTGTTCAGCAGGCTTCACCTGCTGGCCAGCACCTATCGCAATGCCGGGGGTCA
GGCCCCGCGCCTGCTGGTGCATGATGATCCTTTCGGCACCGAGATGATATCCCTCAGCGCGCGCCATGGACGCGGGCTGC
CGGGCGATGTGATCCCGCTCAGCGTCTCGGCGCTGGCCGGTTTCGGGCATGCGGAAATGCTTGCGGCCCTTGCCACGGGC
TTTGCATCCGTGAGCGTCCTGCTGGCCCCCACGACCGAAGGCGACGTGATCGCCAGCGAGGCAACACTGGCGAATGCGAT
TGCCGGACAAGACAGCGTGCGCGTCCTTGATCTGGCAGACCCCGACGCCCTGTCAGATGCGCTTTATGACGCTGAAACGA
GTGATGCGGTATCCGACCCCATCCTGCCGATGGGCAGCCGCCGTCAGGTCGCGCGGCTGGCGGCCAAGGCGCTGCAACCG
GGCGCAGAGGTGCTGGAATTACCCGACGCCTCCCCCTATGGCGCGATACTGGTGGATACCGACGCCTGCACGCTGTGTCT
GTCCTGTGTGTCCCTTTGCCCCTCTGGCGCTCTGGGCGACAATCCCGACAATCCGCAACTGCGCTTTCAGGAGGATGCCT
GCCTGCAATGCGGGCTGTGCAGCAACATCTGTCCCGAACAGGCGATCACCCTCAAACCGCAGCTTGATCTGACGGACGCG
GCTTTCACTCAAAAAGTGATGCACGAGGAAGAACCCTTTGCCTGCGTTGATTGCGGCGCCCTCTTTGGTGTTAAATCAAC
GGTGGAACGGATCACCGAAAAACTGGCGGGCAATCACGCGATGTTTTCCAGCCCCGAGACGATCCGGATGATCCAGATGT
GCGATAACTGCCGCATTCAGGCGCAGTTTCACGCAACGGACAACCCCTTTGCCGGCAAGGAGCGCCCGCGCGTGCGCACC
TCTGAGGACTATCTGAGCAAGCGCAAGGATCACTGA

Upstream 100 bases:

>100_bases
TGACGTGGAATTCCGGTTTGCGCGCGCTGGTAATCCTGAGTAATCATGCCCGGGTGCGCGCATCCAAAACATCAAAAATC
AGCGCCATGCGGAGGAAGAT

Downstream 100 bases:

>100_bases
TGCTTCAGCGGGGCCCCAAGATCAGCCGGCGCAATGCCGGACACATAGGCGAGGATTGCGTCCAGTTCATCCGGGGTCAT
CGTCATCGGCACCATGGGCG

Product: iron-sulfur cluster-binding protein, putative

Products: NA

Alternate protein names: 4Fe-4S Ferredoxin; Polyferredoxins; 4fe-4S Ferredoxin; Ferridoxin Protein; Methyl-Viologen-Reducing Hydrogenase Delta Subunit

Number of amino acids: Translated: 651; Mature: 650

Protein sequence:

>651_residues
MTKTLVVCDCLGSQSIDVDALEAGTGFACSKVFSDACGSQIEQTAKLIAAGDTVVACQQQARLFTELAEEIEAETPGFVD
IRDRAGWTAAGQDPTPKLAALVAEALVPVPSEKTVDIISHGTCLVIGDTDAALNAARDLSDTLAVTLLTSTPGDAEQESA
FEIVSGRLARAQGSLGQFDLRIDGFQQMIAGGRGSATWTEPKDAARSSCDIIVDLSGGTSLFPAPAKRDGYLRADPGSAP
AVAKVVFAAAQLIGTFEKPLYVRLEEPICAHSRAGQSACSKCLDVCPTGAITSAGEHVAIDPLICAGCGACSALCPSGAI
TYDAPPVGSVFSRLHLLASTYRNAGGQAPRLLVHDDPFGTEMISLSARHGRGLPGDVIPLSVSALAGFGHAEMLAALATG
FASVSVLLAPTTEGDVIASEATLANAIAGQDSVRVLDLADPDALSDALYDAETSDAVSDPILPMGSRRQVARLAAKALQP
GAEVLELPDASPYGAILVDTDACTLCLSCVSLCPSGALGDNPDNPQLRFQEDACLQCGLCSNICPEQAITLKPQLDLTDA
AFTQKVMHEEEPFACVDCGALFGVKSTVERITEKLAGNHAMFSSPETIRMIQMCDNCRIQAQFHATDNPFAGKERPRVRT
SEDYLSKRKDH

Sequences:

>Translated_651_residues
MTKTLVVCDCLGSQSIDVDALEAGTGFACSKVFSDACGSQIEQTAKLIAAGDTVVACQQQARLFTELAEEIEAETPGFVD
IRDRAGWTAAGQDPTPKLAALVAEALVPVPSEKTVDIISHGTCLVIGDTDAALNAARDLSDTLAVTLLTSTPGDAEQESA
FEIVSGRLARAQGSLGQFDLRIDGFQQMIAGGRGSATWTEPKDAARSSCDIIVDLSGGTSLFPAPAKRDGYLRADPGSAP
AVAKVVFAAAQLIGTFEKPLYVRLEEPICAHSRAGQSACSKCLDVCPTGAITSAGEHVAIDPLICAGCGACSALCPSGAI
TYDAPPVGSVFSRLHLLASTYRNAGGQAPRLLVHDDPFGTEMISLSARHGRGLPGDVIPLSVSALAGFGHAEMLAALATG
FASVSVLLAPTTEGDVIASEATLANAIAGQDSVRVLDLADPDALSDALYDAETSDAVSDPILPMGSRRQVARLAAKALQP
GAEVLELPDASPYGAILVDTDACTLCLSCVSLCPSGALGDNPDNPQLRFQEDACLQCGLCSNICPEQAITLKPQLDLTDA
AFTQKVMHEEEPFACVDCGALFGVKSTVERITEKLAGNHAMFSSPETIRMIQMCDNCRIQAQFHATDNPFAGKERPRVRT
SEDYLSKRKDH
>Mature_650_residues
TKTLVVCDCLGSQSIDVDALEAGTGFACSKVFSDACGSQIEQTAKLIAAGDTVVACQQQARLFTELAEEIEAETPGFVDI
RDRAGWTAAGQDPTPKLAALVAEALVPVPSEKTVDIISHGTCLVIGDTDAALNAARDLSDTLAVTLLTSTPGDAEQESAF
EIVSGRLARAQGSLGQFDLRIDGFQQMIAGGRGSATWTEPKDAARSSCDIIVDLSGGTSLFPAPAKRDGYLRADPGSAPA
VAKVVFAAAQLIGTFEKPLYVRLEEPICAHSRAGQSACSKCLDVCPTGAITSAGEHVAIDPLICAGCGACSALCPSGAIT
YDAPPVGSVFSRLHLLASTYRNAGGQAPRLLVHDDPFGTEMISLSARHGRGLPGDVIPLSVSALAGFGHAEMLAALATGF
ASVSVLLAPTTEGDVIASEATLANAIAGQDSVRVLDLADPDALSDALYDAETSDAVSDPILPMGSRRQVARLAAKALQPG
AEVLELPDASPYGAILVDTDACTLCLSCVSLCPSGALGDNPDNPQLRFQEDACLQCGLCSNICPEQAITLKPQLDLTDAA
FTQKVMHEEEPFACVDCGALFGVKSTVERITEKLAGNHAMFSSPETIRMIQMCDNCRIQAQFHATDNPFAGKERPRVRTS
EDYLSKRKDH

Specific function: Unknown

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67942; Mature: 67811

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKTLVVCDCLGSQSIDVDALEAGTGFACSKVFSDACGSQIEQTAKLIAAGDTVVACQQQ
CCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
ARLFTELAEEIEAETPGFVDIRDRAGWTAAGQDPTPKLAALVAEALVPVPSEKTVDIISH
HHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEECC
GTCLVIGDTDAALNAARDLSDTLAVTLLTSTPGDAEQESAFEIVSGRLARAQGSLGQFDL
CEEEEECCCHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEE
RIDGFQQMIAGGRGSATWTEPKDAARSSCDIIVDLSGGTSLFPAPAKRDGYLRADPGSAP
EEHHHHHHHCCCCCCCCCCCCHHHCCCCCCEEEECCCCCCCCCCCCCCCCEEEECCCCCH
AVAKVVFAAAQLIGTFEKPLYVRLEEPICAHSRAGQSACSKCLDVCPTGAITSAGEHVAI
HHHHHHHHHHHHHHHCCCCEEEEECCCHHHCCCCCHHHHHHHHHHCCCCCCCCCCCEEEE
DPLICAGCGACSALCPSGAITYDAPPVGSVFSRLHLLASTYRNAGGQAPRLLVHDDPFGT
CCHHHHCCCHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCC
EMISLSARHGRGLPGDVIPLSVSALAGFGHAEMLAALATGFASVSVLLAPTTEGDVIASE
CEEEEEHHCCCCCCCCEEHEEHHHHHCCCHHHHHHHHHHHHHEEEEEEECCCCCCEEECH
ATLANAIAGQDSVRVLDLADPDALSDALYDAETSDAVSDPILPMGSRRQVARLAAKALQP
HHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCCCHHCCCCCCCCCCHHHHHHHHHHHHCC
GAEVLELPDASPYGAILVDTDACTLCLSCVSLCPSGALGDNPDNPQLRFQEDACLQCGLC
CCHHEECCCCCCCCEEEEECHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCHHHHCCCC
SNICPEQAITLKPQLDLTDAAFTQKVMHEEEPFACVDCGALFGVKSTVERITEKLAGNHA
CCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCC
MFSSPETIRMIQMCDNCRIQAQFHATDNPFAGKERPRVRTSEDYLSKRKDH
CCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHCCCC
>Mature Secondary Structure 
TKTLVVCDCLGSQSIDVDALEAGTGFACSKVFSDACGSQIEQTAKLIAAGDTVVACQQQ
CCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
ARLFTELAEEIEAETPGFVDIRDRAGWTAAGQDPTPKLAALVAEALVPVPSEKTVDIISH
HHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEECC
GTCLVIGDTDAALNAARDLSDTLAVTLLTSTPGDAEQESAFEIVSGRLARAQGSLGQFDL
CEEEEECCCHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEE
RIDGFQQMIAGGRGSATWTEPKDAARSSCDIIVDLSGGTSLFPAPAKRDGYLRADPGSAP
EEHHHHHHHCCCCCCCCCCCCHHHCCCCCCEEEECCCCCCCCCCCCCCCCEEEECCCCCH
AVAKVVFAAAQLIGTFEKPLYVRLEEPICAHSRAGQSACSKCLDVCPTGAITSAGEHVAI
HHHHHHHHHHHHHHHCCCCEEEEECCCHHHCCCCCHHHHHHHHHHCCCCCCCCCCCEEEE
DPLICAGCGACSALCPSGAITYDAPPVGSVFSRLHLLASTYRNAGGQAPRLLVHDDPFGT
CCHHHHCCCHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCC
EMISLSARHGRGLPGDVIPLSVSALAGFGHAEMLAALATGFASVSVLLAPTTEGDVIASE
CEEEEEHHCCCCCCCCEEHEEHHHHHCCCHHHHHHHHHHHHHEEEEEEECCCCCCEEECH
ATLANAIAGQDSVRVLDLADPDALSDALYDAETSDAVSDPILPMGSRRQVARLAAKALQP
HHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCCCHHCCCCCCCCCCHHHHHHHHHHHHCC
GAEVLELPDASPYGAILVDTDACTLCLSCVSLCPSGALGDNPDNPQLRFQEDACLQCGLC
CCHHEECCCCCCCCEEEEECHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCHHHHCCCC
SNICPEQAITLKPQLDLTDAAFTQKVMHEEEPFACVDCGALFGVKSTVERITEKLAGNHA
CCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCC
MFSSPETIRMIQMCDNCRIQAQFHATDNPFAGKERPRVRTSEDYLSKRKDH
CCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA