Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is frk [H]

Identifier: 110680082

GI number: 110680082

Start: 2754068

End: 2755000

Strand: Reverse

Name: frk [H]

Synonym: RD1_2877

Alternate gene names: 110680082

Gene position: 2755000-2754068 (Counterclockwise)

Preceding gene: 110680083

Following gene: 110680081

Centisome position: 66.66

GC content: 63.13

Gene sequence:

>933_bases
ATGATACTGTGCTGCGGCGAAGCGCTGATTGACATGATCCCGACGCCCACCGGCGCGGGCGCGGAAGGATTTGTGCCGCA
CTCCGGCGGGGCGATTTTCAACACCGCCATCGGTCTGGGCCGTCTTGGGGTGCCGACGGGGTTCCTTTCCGGGCTGTCGA
CCGACCTCTTTGGGCAGCAATTAGTGTCGGACCTCGCGGCGAGCCATGTGAGCGCGGATTATGCCGTGCGATCAGACCTG
CCAACGACGCTGGCCTTCGTGCGGCTGAGCGGTGGGCAGGCGAGCTATACGTTTTATGATGAAAACACCGCCGGGCGCAT
GTTGGAGCCCGAACAACTGCCGCACCTATCGCCAGATGTCACGGCGCTTTACTTCGGCGGCATCAGCCTGATCAGTGAGC
CTTGCGCCGAATTCTATGCGGCACTGGCCCTGCGGGACGGCGCGCAGCGCGTGATCATGCTGGATCCGAACATCCGCCCG
GGGTTTATCCGGGACGAGGCACGGTATCGCGCCCGGCTGGACCGCATGATGGTCGGGGCCGATATCCTGAAAGTGTCGGA
TGAGGATCTCGACTGGATACTGCCGGGTTCTGGCACGACAGAGGATAAGGCGATGTCCATAACCGAAAAGGGCGTGCGCA
TCGTCATCGTCACCCGTGGCAGCGCCGGTGCGTCGGCCCATTTCACGGATGGGCGCGCGGTTTCTGTGCCCGCACAAAAG
GCAGTTGTCGTTGATACGGTTGGTGCCGGGGACACGTTCAACTCCGGCGTGCTGGCGCATCTGTCCAGAGCGGGTTTTCT
GAGCAAGGCCCGCATAAAGGACATCGGCCCGGCTGATATGGAAGATGCGCTGGCCCTTGGCGCGCGTGTGGCGGCAGTCA
CGGTCGCCCGCGCAGGTGCAAACCCGCCTTGGGCGCAGGAACTGAACCTATGA

Upstream 100 bases:

>100_bases
CTGGTTGCACAGAATGACTGGGCCGCCATCGAGAGCCTCGCGAAAGCGGCCAGCGCCCTGGGCCAGTGACGCGCGCGGTT
CACAACATGGGAAAAGCGGA

Downstream 100 bases:

>100_bases
TGAGTGGCGGTGGCGCCGTGAAACCTGTACCACCATCCAAAATGAGCTAAGGTGCACGCGTTTGCGCCGCAACCGAGAGT
ATATGATAACGATGACCACA

Product: fructokinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MILCCGEALIDMIPTPTGAGAEGFVPHSGGAIFNTAIGLGRLGVPTGFLSGLSTDLFGQQLVSDLAASHVSADYAVRSDL
PTTLAFVRLSGGQASYTFYDENTAGRMLEPEQLPHLSPDVTALYFGGISLISEPCAEFYAALALRDGAQRVIMLDPNIRP
GFIRDEARYRARLDRMMVGADILKVSDEDLDWILPGSGTTEDKAMSITEKGVRIVIVTRGSAGASAHFTDGRAVSVPAQK
AVVVDTVGAGDTFNSGVLAHLSRAGFLSKARIKDIGPADMEDALALGARVAAVTVARAGANPPWAQELNL

Sequences:

>Translated_310_residues
MILCCGEALIDMIPTPTGAGAEGFVPHSGGAIFNTAIGLGRLGVPTGFLSGLSTDLFGQQLVSDLAASHVSADYAVRSDL
PTTLAFVRLSGGQASYTFYDENTAGRMLEPEQLPHLSPDVTALYFGGISLISEPCAEFYAALALRDGAQRVIMLDPNIRP
GFIRDEARYRARLDRMMVGADILKVSDEDLDWILPGSGTTEDKAMSITEKGVRIVIVTRGSAGASAHFTDGRAVSVPAQK
AVVVDTVGAGDTFNSGVLAHLSRAGFLSKARIKDIGPADMEDALALGARVAAVTVARAGANPPWAQELNL
>Mature_310_residues
MILCCGEALIDMIPTPTGAGAEGFVPHSGGAIFNTAIGLGRLGVPTGFLSGLSTDLFGQQLVSDLAASHVSADYAVRSDL
PTTLAFVRLSGGQASYTFYDENTAGRMLEPEQLPHLSPDVTALYFGGISLISEPCAEFYAALALRDGAQRVIMLDPNIRP
GFIRDEARYRARLDRMMVGADILKVSDEDLDWILPGSGTTEDKAMSITEKGVRIVIVTRGSAGASAHFTDGRAVSVPAQK
AVVVDTVGAGDTFNSGVLAHLSRAGFLSKARIKDIGPADMEDALALGARVAAVTVARAGANPPWAQELNL

Specific function: Unknown

COG id: COG0524

COG function: function code G; Sugar kinases, ribokinase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carbohydrate kinase pfkB family [H]

Homologues:

Organism=Escherichia coli, GI87082281, Length=279, Percent_Identity=27.9569892473118, Blast_Score=73, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011611
- InterPro:   IPR002173 [H]

Pfam domain/function: PF00294 PfkB [H]

EC number: =2.7.1.4 [H]

Molecular weight: Translated: 32491; Mature: 32491

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: PS00584 PFKB_KINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILCCGEALIDMIPTPTGAGAEGFVPHSGGAIFNTAIGLGRLGVPTGFLSGLSTDLFGQQ
CEEECCHHHHHHCCCCCCCCCCCCCCCCCCEEEHHHHCCCCCCCCHHHHHHCCHHHHHHH
LVSDLAASHVSADYAVRSDLPTTLAFVRLSGGQASYTFYDENTAGRMLEPEQLPHLSPDV
HHHHHHHHHHCCCHHHHCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCHHHCCCCCCCC
TALYFGGISLISEPCAEFYAALALRDGAQRVIMLDPNIRPGFIRDEARYRARLDRMMVGA
EEEEECCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCC
DILKVSDEDLDWILPGSGTTEDKAMSITEKGVRIVIVTRGSAGASAHFTDGRAVSVPAQK
HHEEECCCCCCEEECCCCCCCHHHHEEECCCEEEEEEECCCCCCCEEECCCEEEECCCCC
AVVVDTVGAGDTFNSGVLAHLSRAGFLSKARIKDIGPADMEDALALGARVAAVTVARAGA
EEEEEECCCCCCCCCCHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHEEEEECCCC
NPPWAQELNL
CCCCHHCCCC
>Mature Secondary Structure
MILCCGEALIDMIPTPTGAGAEGFVPHSGGAIFNTAIGLGRLGVPTGFLSGLSTDLFGQQ
CEEECCHHHHHHCCCCCCCCCCCCCCCCCCEEEHHHHCCCCCCCCHHHHHHCCHHHHHHH
LVSDLAASHVSADYAVRSDLPTTLAFVRLSGGQASYTFYDENTAGRMLEPEQLPHLSPDV
HHHHHHHHHHCCCHHHHCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCHHHCCCCCCCC
TALYFGGISLISEPCAEFYAALALRDGAQRVIMLDPNIRPGFIRDEARYRARLDRMMVGA
EEEEECCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCC
DILKVSDEDLDWILPGSGTTEDKAMSITEKGVRIVIVTRGSAGASAHFTDGRAVSVPAQK
HHEEECCCCCCEEECCCCCCCHHHHEEECCCEEEEEEECCCCCCCEEECCCEEEECCCCC
AVVVDTVGAGDTFNSGVLAHLSRAGFLSKARIKDIGPADMEDALALGARVAAVTVARAGA
EEEEEECCCCCCCCCCHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHEEEEECCCC
NPPWAQELNL
CCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8932706 [H]