| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is frk [H]
Identifier: 110680082
GI number: 110680082
Start: 2754068
End: 2755000
Strand: Reverse
Name: frk [H]
Synonym: RD1_2877
Alternate gene names: 110680082
Gene position: 2755000-2754068 (Counterclockwise)
Preceding gene: 110680083
Following gene: 110680081
Centisome position: 66.66
GC content: 63.13
Gene sequence:
>933_bases ATGATACTGTGCTGCGGCGAAGCGCTGATTGACATGATCCCGACGCCCACCGGCGCGGGCGCGGAAGGATTTGTGCCGCA CTCCGGCGGGGCGATTTTCAACACCGCCATCGGTCTGGGCCGTCTTGGGGTGCCGACGGGGTTCCTTTCCGGGCTGTCGA CCGACCTCTTTGGGCAGCAATTAGTGTCGGACCTCGCGGCGAGCCATGTGAGCGCGGATTATGCCGTGCGATCAGACCTG CCAACGACGCTGGCCTTCGTGCGGCTGAGCGGTGGGCAGGCGAGCTATACGTTTTATGATGAAAACACCGCCGGGCGCAT GTTGGAGCCCGAACAACTGCCGCACCTATCGCCAGATGTCACGGCGCTTTACTTCGGCGGCATCAGCCTGATCAGTGAGC CTTGCGCCGAATTCTATGCGGCACTGGCCCTGCGGGACGGCGCGCAGCGCGTGATCATGCTGGATCCGAACATCCGCCCG GGGTTTATCCGGGACGAGGCACGGTATCGCGCCCGGCTGGACCGCATGATGGTCGGGGCCGATATCCTGAAAGTGTCGGA TGAGGATCTCGACTGGATACTGCCGGGTTCTGGCACGACAGAGGATAAGGCGATGTCCATAACCGAAAAGGGCGTGCGCA TCGTCATCGTCACCCGTGGCAGCGCCGGTGCGTCGGCCCATTTCACGGATGGGCGCGCGGTTTCTGTGCCCGCACAAAAG GCAGTTGTCGTTGATACGGTTGGTGCCGGGGACACGTTCAACTCCGGCGTGCTGGCGCATCTGTCCAGAGCGGGTTTTCT GAGCAAGGCCCGCATAAAGGACATCGGCCCGGCTGATATGGAAGATGCGCTGGCCCTTGGCGCGCGTGTGGCGGCAGTCA CGGTCGCCCGCGCAGGTGCAAACCCGCCTTGGGCGCAGGAACTGAACCTATGA
Upstream 100 bases:
>100_bases CTGGTTGCACAGAATGACTGGGCCGCCATCGAGAGCCTCGCGAAAGCGGCCAGCGCCCTGGGCCAGTGACGCGCGCGGTT CACAACATGGGAAAAGCGGA
Downstream 100 bases:
>100_bases TGAGTGGCGGTGGCGCCGTGAAACCTGTACCACCATCCAAAATGAGCTAAGGTGCACGCGTTTGCGCCGCAACCGAGAGT ATATGATAACGATGACCACA
Product: fructokinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 310; Mature: 310
Protein sequence:
>310_residues MILCCGEALIDMIPTPTGAGAEGFVPHSGGAIFNTAIGLGRLGVPTGFLSGLSTDLFGQQLVSDLAASHVSADYAVRSDL PTTLAFVRLSGGQASYTFYDENTAGRMLEPEQLPHLSPDVTALYFGGISLISEPCAEFYAALALRDGAQRVIMLDPNIRP GFIRDEARYRARLDRMMVGADILKVSDEDLDWILPGSGTTEDKAMSITEKGVRIVIVTRGSAGASAHFTDGRAVSVPAQK AVVVDTVGAGDTFNSGVLAHLSRAGFLSKARIKDIGPADMEDALALGARVAAVTVARAGANPPWAQELNL
Sequences:
>Translated_310_residues MILCCGEALIDMIPTPTGAGAEGFVPHSGGAIFNTAIGLGRLGVPTGFLSGLSTDLFGQQLVSDLAASHVSADYAVRSDL PTTLAFVRLSGGQASYTFYDENTAGRMLEPEQLPHLSPDVTALYFGGISLISEPCAEFYAALALRDGAQRVIMLDPNIRP GFIRDEARYRARLDRMMVGADILKVSDEDLDWILPGSGTTEDKAMSITEKGVRIVIVTRGSAGASAHFTDGRAVSVPAQK AVVVDTVGAGDTFNSGVLAHLSRAGFLSKARIKDIGPADMEDALALGARVAAVTVARAGANPPWAQELNL >Mature_310_residues MILCCGEALIDMIPTPTGAGAEGFVPHSGGAIFNTAIGLGRLGVPTGFLSGLSTDLFGQQLVSDLAASHVSADYAVRSDL PTTLAFVRLSGGQASYTFYDENTAGRMLEPEQLPHLSPDVTALYFGGISLISEPCAEFYAALALRDGAQRVIMLDPNIRP GFIRDEARYRARLDRMMVGADILKVSDEDLDWILPGSGTTEDKAMSITEKGVRIVIVTRGSAGASAHFTDGRAVSVPAQK AVVVDTVGAGDTFNSGVLAHLSRAGFLSKARIKDIGPADMEDALALGARVAAVTVARAGANPPWAQELNL
Specific function: Unknown
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbohydrate kinase pfkB family [H]
Homologues:
Organism=Escherichia coli, GI87082281, Length=279, Percent_Identity=27.9569892473118, Blast_Score=73, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011611 - InterPro: IPR002173 [H]
Pfam domain/function: PF00294 PfkB [H]
EC number: =2.7.1.4 [H]
Molecular weight: Translated: 32491; Mature: 32491
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: PS00584 PFKB_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILCCGEALIDMIPTPTGAGAEGFVPHSGGAIFNTAIGLGRLGVPTGFLSGLSTDLFGQQ CEEECCHHHHHHCCCCCCCCCCCCCCCCCCEEEHHHHCCCCCCCCHHHHHHCCHHHHHHH LVSDLAASHVSADYAVRSDLPTTLAFVRLSGGQASYTFYDENTAGRMLEPEQLPHLSPDV HHHHHHHHHHCCCHHHHCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCHHHCCCCCCCC TALYFGGISLISEPCAEFYAALALRDGAQRVIMLDPNIRPGFIRDEARYRARLDRMMVGA EEEEECCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCC DILKVSDEDLDWILPGSGTTEDKAMSITEKGVRIVIVTRGSAGASAHFTDGRAVSVPAQK HHEEECCCCCCEEECCCCCCCHHHHEEECCCEEEEEEECCCCCCCEEECCCEEEECCCCC AVVVDTVGAGDTFNSGVLAHLSRAGFLSKARIKDIGPADMEDALALGARVAAVTVARAGA EEEEEECCCCCCCCCCHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHEEEEECCCC NPPWAQELNL CCCCHHCCCC >Mature Secondary Structure MILCCGEALIDMIPTPTGAGAEGFVPHSGGAIFNTAIGLGRLGVPTGFLSGLSTDLFGQQ CEEECCHHHHHHCCCCCCCCCCCCCCCCCCEEEHHHHCCCCCCCCHHHHHHCCHHHHHHH LVSDLAASHVSADYAVRSDLPTTLAFVRLSGGQASYTFYDENTAGRMLEPEQLPHLSPDV HHHHHHHHHHCCCHHHHCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCHHHCCCCCCCC TALYFGGISLISEPCAEFYAALALRDGAQRVIMLDPNIRPGFIRDEARYRARLDRMMVGA EEEEECCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCC DILKVSDEDLDWILPGSGTTEDKAMSITEKGVRIVIVTRGSAGASAHFTDGRAVSVPAQK HHEEECCCCCCEEECCCCCCCHHHHEEECCCEEEEEEECCCCCCCEEECCCEEEECCCCC AVVVDTVGAGDTFNSGVLAHLSRAGFLSKARIKDIGPADMEDALALGARVAAVTVARAGA EEEEEECCCCCCCCCCHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHEEEEECCCC NPPWAQELNL CCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8932706 [H]