Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is glgP [H]

Identifier: 110680081

GI number: 110680081

Start: 2751553

End: 2753976

Strand: Reverse

Name: glgP [H]

Synonym: RD1_2876

Alternate gene names: 110680081

Gene position: 2753976-2751553 (Counterclockwise)

Preceding gene: 110680082

Following gene: 110680080

Centisome position: 66.63

GC content: 60.48

Gene sequence:

>2424_bases
ATGACCACACCCCGTATTTCTGCCCCATCCGTTGAAGCGTTCAGCGCGGCCATCCTGCGCCATCTGAAATTGTCGCTGGG
CAAGGACCCGGAGCATGCGTCGCTCTATGACTGGCGCATGTCACTGGCGTTGAGCCTGCGCGATCATGTGGTGGAACCGT
GGTTCGAGAGCACCCGCAAGACCTATGAAGCACGCGGCAAGCGCGTTTATTATTTGTCGATGGAGTTTCTGATCGGGCGT
CTTGTGGAGGACGTGGCCGTGAACCTCGGCTTTGAGGACATCGCAGAAGAGGCGATCACGGCGCTGGGTCAAAACTACGG
CGATGTCGTGGCCAACGAGCCCGACGCAGCGCTTGGCAACGGCGGGCTGGGGCGATTGGCGGCGTGTTTCATGGATTCGC
TCTCGACGCTTGGAATCCCGGCCTACGGATATGGCATCCGCTATGAACACGGGTTGTTTGAACAACATTTTGAAGAGGGT
GCGCAGATCGAGACGGCAGAGACATGGCTCTCACAAGCGCATGTCTGGGAGTTTGAGCGCCCCGAAGTGACCTATCCCAT
CCATTTCGGCGGACATGTGGCAGTTGAAGACGGCAAAACCGTCTGGCACGCGGGCGAAACGGTTATGGCATCGGCCTATG
ACACGCCCGTGCTGGGCTGGCAGGGACGGTGGGCGAATACGCTGCGGTTATGGGCGGCCAAACCGACCACCAATTTCGAC
CTCGAAAGCTTCAACCGTGGCGATTACATCGCGGCCAGCGCGCCCGAAGCGCTCGCGCGGACCATCAGCCGTGTGCTCTA
TCCCGACGATACCACCGATGTGGGCAAGGAGCTGCGCCTGAAACAGGAGTACTTCTTTACTTCCGCCTCCCTGCAGGACC
TGCTGCGCCGCTTTCTCAGCGAGGGCGGGGCGCTCAAGGACCTGCCGGATCATGTTGCGATCCAGCTGAACGATACGCAC
CCGGCGATTGCCGGTCCGGAACTGGTGCGTTTGCTCATGGATGAGCACCAGTTCGAAGTGGCGCAGGCCATCACCACCGC
CCGCGCTTGCCTTGCCTATACGAACCACACGCTGCTGCCGGAAGCGCTGGAGCGCTGGCCCGAAGACCTGTTTGCGCGTG
TGCTGCCGCGCCATTACCGCATCATCCAGCTGATCGAGGCGGCACATTTCGCCACGGCGGGCGAAACCGTGCGCATCTTT
GAGCATGGCGAGGTCAAGATGGGCGAACTGGCCTTTGTCATGGCCCATCACGTCAATGGCGTTTCTGCGCTGCACTCCGA
ACTGGTCAAGGAAACGGTGTTTTCGGACCTCAACGCGGCCTATCCGGGCCGCATCATCAACCAGACCAACGGCATTACTC
CGCGCCGCTGGCTTTACACCTGCAACCGGCCGCTGCGCGGGCTGATCAATGACACGATCGGAACCGCCTGGCCGGATAAT
CTTGATCAGCTCTCGGGCTTGACGGCGCATGTGGAGGACAGCGCGTTCCTCGACCGGTTTCAGGCGGCCAAGGACGCCAA
CAAGGCGCGGCTTGCCGATTGGCTCAAGGCGCGCGATGGCGTCAGCGTCGATCCCGCCGCCATGTTTGATGTGCAAATCA
AACGCATCCATGAATACAAACGCCAGCTGATGAACCTGCTGGAAACGGTTGCGCTCTGGAATGACATCCGCGCCAATCCG
AATGGCGCTTGGACACCGCGCGTCAAACTGTTCGGGGGCAAGGCGGCCCCGGGCTATGTGGTCGCAAAAGAGATCATCCA
CCTGATCAACGACGCCGCACGCGTCATCAATGCGGACCCGGTCACGCGTGAATTCCTGCAAATCGTCTATCCGGAAAACT
ACAATGTTTCCATGGCCGAGATGTTGATCCCGGCGGCGGACCTCTCGGAACAGATCTCGACCGCCGGAAAGGAAGCATCC
GGTACCGGCAACATGAAATTCGCCCTGAACGGCGCGCCCACCATCGGCACGCTCGATGGCGCCAACGTGGAAATCCGCGA
CTGCGTCGGGGCCGAGAATTTCTTTCTGTTTGGCTTGACGGCGGCGGAGGTGACGGCGCGCCGGGCAGAGCCTGATTATG
CCCGTACCGCAATTGCCGCGAGCCCCCGGTTGAGCGAAGTGCTGGACCAGATCAGATCAGGCCTGTTTTCCGGTGGCGAC
AGGGATCGCTATGTGAACCTTGTGAATGGCCTTTATGATCACGACTACTTCCTTGTGACCTGTGATTTTGACGCCTATTT
CGCCGCGCAACGCCAGGTCGATACGGCCTTTGCCGACAGTCGCACCTGGACCCGGATGGCCGCGTTGAACACCGCGCGCG
TGGGGTGGTTCTCCTCTGACAGAACGATCAGCGGCTATGCCAAGGACATCTGGCAAGCGCAAAGCCTGCTGGAACAACGC
GACGCAGACCAGAACGTCGCCTGA

Upstream 100 bases:

>100_bases
AACCTATGATGAGTGGCGGTGGCGCCGTGAAACCTGTACCACCATCCAAAATGAGCTAAGGTGCACGCGTTTGCGCCGCA
ACCGAGAGTATATGATAACG

Downstream 100 bases:

>100_bases
AGGAACACGTGGTGTGAATATCTCACAAACAGATGCCGAAAAGCTCGCCGCGGGGTGTCACGGCAATCCGTTTTCCGTGC
TCGGCCTGCATGAGGTTGCG

Product: glycogen phosphorylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 807; Mature: 806

Protein sequence:

>807_residues
MTTPRISAPSVEAFSAAILRHLKLSLGKDPEHASLYDWRMSLALSLRDHVVEPWFESTRKTYEARGKRVYYLSMEFLIGR
LVEDVAVNLGFEDIAEEAITALGQNYGDVVANEPDAALGNGGLGRLAACFMDSLSTLGIPAYGYGIRYEHGLFEQHFEEG
AQIETAETWLSQAHVWEFERPEVTYPIHFGGHVAVEDGKTVWHAGETVMASAYDTPVLGWQGRWANTLRLWAAKPTTNFD
LESFNRGDYIAASAPEALARTISRVLYPDDTTDVGKELRLKQEYFFTSASLQDLLRRFLSEGGALKDLPDHVAIQLNDTH
PAIAGPELVRLLMDEHQFEVAQAITTARACLAYTNHTLLPEALERWPEDLFARVLPRHYRIIQLIEAAHFATAGETVRIF
EHGEVKMGELAFVMAHHVNGVSALHSELVKETVFSDLNAAYPGRIINQTNGITPRRWLYTCNRPLRGLINDTIGTAWPDN
LDQLSGLTAHVEDSAFLDRFQAAKDANKARLADWLKARDGVSVDPAAMFDVQIKRIHEYKRQLMNLLETVALWNDIRANP
NGAWTPRVKLFGGKAAPGYVVAKEIIHLINDAARVINADPVTREFLQIVYPENYNVSMAEMLIPAADLSEQISTAGKEAS
GTGNMKFALNGAPTIGTLDGANVEIRDCVGAENFFLFGLTAAEVTARRAEPDYARTAIAASPRLSEVLDQIRSGLFSGGD
RDRYVNLVNGLYDHDYFLVTCDFDAYFAAQRQVDTAFADSRTWTRMAALNTARVGWFSSDRTISGYAKDIWQAQSLLEQR
DADQNVA

Sequences:

>Translated_807_residues
MTTPRISAPSVEAFSAAILRHLKLSLGKDPEHASLYDWRMSLALSLRDHVVEPWFESTRKTYEARGKRVYYLSMEFLIGR
LVEDVAVNLGFEDIAEEAITALGQNYGDVVANEPDAALGNGGLGRLAACFMDSLSTLGIPAYGYGIRYEHGLFEQHFEEG
AQIETAETWLSQAHVWEFERPEVTYPIHFGGHVAVEDGKTVWHAGETVMASAYDTPVLGWQGRWANTLRLWAAKPTTNFD
LESFNRGDYIAASAPEALARTISRVLYPDDTTDVGKELRLKQEYFFTSASLQDLLRRFLSEGGALKDLPDHVAIQLNDTH
PAIAGPELVRLLMDEHQFEVAQAITTARACLAYTNHTLLPEALERWPEDLFARVLPRHYRIIQLIEAAHFATAGETVRIF
EHGEVKMGELAFVMAHHVNGVSALHSELVKETVFSDLNAAYPGRIINQTNGITPRRWLYTCNRPLRGLINDTIGTAWPDN
LDQLSGLTAHVEDSAFLDRFQAAKDANKARLADWLKARDGVSVDPAAMFDVQIKRIHEYKRQLMNLLETVALWNDIRANP
NGAWTPRVKLFGGKAAPGYVVAKEIIHLINDAARVINADPVTREFLQIVYPENYNVSMAEMLIPAADLSEQISTAGKEAS
GTGNMKFALNGAPTIGTLDGANVEIRDCVGAENFFLFGLTAAEVTARRAEPDYARTAIAASPRLSEVLDQIRSGLFSGGD
RDRYVNLVNGLYDHDYFLVTCDFDAYFAAQRQVDTAFADSRTWTRMAALNTARVGWFSSDRTISGYAKDIWQAQSLLEQR
DADQNVA
>Mature_806_residues
TTPRISAPSVEAFSAAILRHLKLSLGKDPEHASLYDWRMSLALSLRDHVVEPWFESTRKTYEARGKRVYYLSMEFLIGRL
VEDVAVNLGFEDIAEEAITALGQNYGDVVANEPDAALGNGGLGRLAACFMDSLSTLGIPAYGYGIRYEHGLFEQHFEEGA
QIETAETWLSQAHVWEFERPEVTYPIHFGGHVAVEDGKTVWHAGETVMASAYDTPVLGWQGRWANTLRLWAAKPTTNFDL
ESFNRGDYIAASAPEALARTISRVLYPDDTTDVGKELRLKQEYFFTSASLQDLLRRFLSEGGALKDLPDHVAIQLNDTHP
AIAGPELVRLLMDEHQFEVAQAITTARACLAYTNHTLLPEALERWPEDLFARVLPRHYRIIQLIEAAHFATAGETVRIFE
HGEVKMGELAFVMAHHVNGVSALHSELVKETVFSDLNAAYPGRIINQTNGITPRRWLYTCNRPLRGLINDTIGTAWPDNL
DQLSGLTAHVEDSAFLDRFQAAKDANKARLADWLKARDGVSVDPAAMFDVQIKRIHEYKRQLMNLLETVALWNDIRANPN
GAWTPRVKLFGGKAAPGYVVAKEIIHLINDAARVINADPVTREFLQIVYPENYNVSMAEMLIPAADLSEQISTAGKEASG
TGNMKFALNGAPTIGTLDGANVEIRDCVGAENFFLFGLTAAEVTARRAEPDYARTAIAASPRLSEVLDQIRSGLFSGGDR
DRYVNLVNGLYDHDYFLVTCDFDAYFAAQRQVDTAFADSRTWTRMAALNTARVGWFSSDRTISGYAKDIWQAQSLLEQRD
ADQNVA

Specific function: Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties [

COG id: COG0058

COG function: function code G; Glucan phosphorylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycogen phosphorylase family [H]

Homologues:

Organism=Homo sapiens, GI71037379, Length=810, Percent_Identity=45.5555555555556, Blast_Score=696, Evalue=0.0,
Organism=Homo sapiens, GI21361370, Length=793, Percent_Identity=47.1626733921816, Blast_Score=692, Evalue=0.0,
Organism=Homo sapiens, GI5032009, Length=794, Percent_Identity=47.2292191435768, Blast_Score=690, Evalue=0.0,
Organism=Homo sapiens, GI255653002, Length=810, Percent_Identity=43.5802469135802, Blast_Score=642, Evalue=0.0,
Organism=Homo sapiens, GI257900462, Length=668, Percent_Identity=46.4071856287425, Blast_Score=579, Evalue=1e-165,
Organism=Escherichia coli, GI2367228, Length=802, Percent_Identity=46.1346633416459, Blast_Score=699, Evalue=0.0,
Organism=Escherichia coli, GI48994936, Length=744, Percent_Identity=46.1021505376344, Blast_Score=639, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17564550, Length=806, Percent_Identity=47.394540942928, Blast_Score=723, Evalue=0.0,
Organism=Caenorhabditis elegans, GI32566204, Length=806, Percent_Identity=47.394540942928, Blast_Score=722, Evalue=0.0,
Organism=Saccharomyces cerevisiae, GI6325418, Length=842, Percent_Identity=42.5178147268409, Blast_Score=602, Evalue=1e-173,
Organism=Drosophila melanogaster, GI78706832, Length=808, Percent_Identity=45.5445544554455, Blast_Score=698, Evalue=0.0,
Organism=Drosophila melanogaster, GI24581010, Length=808, Percent_Identity=45.5445544554455, Blast_Score=698, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011833
- InterPro:   IPR000811 [H]

Pfam domain/function: PF00343 Phosphorylase [H]

EC number: =2.4.1.1 [H]

Molecular weight: Translated: 89780; Mature: 89649

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: PS00102 PHOSPHORYLASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTPRISAPSVEAFSAAILRHLKLSLGKDPEHASLYDWRMSLALSLRDHVVEPWFESTRK
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TYEARGKRVYYLSMEFLIGRLVEDVAVNLGFEDIAEEAITALGQNYGDVVANEPDAALGN
HHHHCCCEEEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
GGLGRLAACFMDSLSTLGIPAYGYGIRYEHGLFEQHFEEGAQIETAETWLSQAHVWEFER
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCEEHHHHHHHHHHCEECCC
PEVTYPIHFGGHVAVEDGKTVWHAGETVMASAYDTPVLGWQGRWANTLRLWAAKPTTNFD
CCEEEEEEECCEEEEECCCEEEECCCEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCC
LESFNRGDYIAASAPEALARTISRVLYPDDTTDVGKELRLKQEYFFTSASLQDLLRRFLS
CCCCCCCCEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EGGALKDLPDHVAIQLNDTHPAIAGPELVRLLMDEHQFEVAQAITTARACLAYTNHTLLP
CCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
EALERWPEDLFARVLPRHYRIIQLIEAAHFATAGETVRIFEHGEVKMGELAFVMAHHVNG
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEHHHHHHHHHHHCCH
VSALHSELVKETVFSDLNAAYPGRIINQTNGITPRRWLYTCNRPLRGLINDTIGTAWPDN
HHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCHHHEECCCHHHHHHHHHCCCCCCCC
LDQLSGLTAHVEDSAFLDRFQAAKDANKARLADWLKARDGVSVDPAAMFDVQIKRIHEYK
HHHHCCCEEECCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
RQLMNLLETVALWNDIRANPNGAWTPRVKLFGGKAAPGYVVAKEIIHLINDAARVINADP
HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCH
VTREFLQIVYPENYNVSMAEMLIPAADLSEQISTAGKEASGTGNMKFALNGAPTIGTLDG
HHHHHHHEECCCCCCCCHHHHHCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEECCCC
ANVEIRDCVGAENFFLFGLTAAEVTARRAEPDYARTAIAASPRLSEVLDQIRSGLFSGGD
CCEEEHHHCCCCCEEEEEEHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCC
RDRYVNLVNGLYDHDYFLVTCDFDAYFAAQRQVDTAFADSRTWTRMAALNTARVGWFSSD
HHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEEEECCC
RTISGYAKDIWQAQSLLEQRDADQNVA
CCCCHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TTPRISAPSVEAFSAAILRHLKLSLGKDPEHASLYDWRMSLALSLRDHVVEPWFESTRK
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TYEARGKRVYYLSMEFLIGRLVEDVAVNLGFEDIAEEAITALGQNYGDVVANEPDAALGN
HHHHCCCEEEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
GGLGRLAACFMDSLSTLGIPAYGYGIRYEHGLFEQHFEEGAQIETAETWLSQAHVWEFER
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCEEHHHHHHHHHHCEECCC
PEVTYPIHFGGHVAVEDGKTVWHAGETVMASAYDTPVLGWQGRWANTLRLWAAKPTTNFD
CCEEEEEEECCEEEEECCCEEEECCCEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCC
LESFNRGDYIAASAPEALARTISRVLYPDDTTDVGKELRLKQEYFFTSASLQDLLRRFLS
CCCCCCCCEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EGGALKDLPDHVAIQLNDTHPAIAGPELVRLLMDEHQFEVAQAITTARACLAYTNHTLLP
CCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
EALERWPEDLFARVLPRHYRIIQLIEAAHFATAGETVRIFEHGEVKMGELAFVMAHHVNG
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEHHHHHHHHHHHCCH
VSALHSELVKETVFSDLNAAYPGRIINQTNGITPRRWLYTCNRPLRGLINDTIGTAWPDN
HHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCHHHEECCCHHHHHHHHHCCCCCCCC
LDQLSGLTAHVEDSAFLDRFQAAKDANKARLADWLKARDGVSVDPAAMFDVQIKRIHEYK
HHHHCCCEEECCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
RQLMNLLETVALWNDIRANPNGAWTPRVKLFGGKAAPGYVVAKEIIHLINDAARVINADP
HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCH
VTREFLQIVYPENYNVSMAEMLIPAADLSEQISTAGKEASGTGNMKFALNGAPTIGTLDG
HHHHHHHEECCCCCCCCHHHHHCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEECCCC
ANVEIRDCVGAENFFLFGLTAAEVTARRAEPDYARTAIAASPRLSEVLDQIRSGLFSGGD
CCEEEHHHCCCCCEEEEEEHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCC
RDRYVNLVNGLYDHDYFLVTCDFDAYFAAQRQVDTAFADSRTWTRMAALNTARVGWFSSD
HHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEEEECCC
RTISGYAKDIWQAQSLLEQRDADQNVA
CCCCHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2645169; 3047129; 9278503; 2975249; 3097003 [H]