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The map label for this gene is aspB [C]

Identifier: 110680029

GI number: 110680029

Start: 2692533

End: 2693675

Strand: Reverse

Name: aspB [C]

Synonym: RD1_2822

Alternate gene names: 110680029

Gene position: 2693675-2692533 (Counterclockwise)

Preceding gene: 110680032

Following gene: 110680028

Centisome position: 65.17

GC content: 60.63

Gene sequence:

>1143_bases
ATGCGGGTTTCAAGGCGTTCTTCAGTCGATCCCTTCATTGTGATGGACGTGATGGAGGCAGCGCATCGGGCAGAGGCGGC
GGGACGCCACATAATTCACATGGAAGTGGGCCAGCCCGGCACCGGTGCGCCAAAGGCTGCGGTATCCGCATTGGCTGATG
CGATGGGGCGGGAAGCGCTGGGGTATACGGTGGCGTTGGGCTTGCCCGCGCTGCGCGACCGTATCGCGCGTCTGTACGGG
GAATGGTATGACGTGGATCTTGATCCGCGCCGGGTGATCATCACGCCGGGGTCTTCGGGTGGATTCATTCTGGCTTTTAC
CGCCCTGTTTGACACCGGCGACCGGGTTGGAATCGGCGCACCGGGATATCCCAGTTATCGCCAGATTTTGCGCGCACTGG
ACCTGTGCCCCGTTGATATCGCCACAGCGCCCGAAAACCGGTTTCAACCTGTGGCCAGTGACCTTGAGGGGCGCGACCTG
GCGGGGCTCATGGTCGCCTCACCGGCAAACCCGACGGGAACGATGCTGGACAAGGCAGCGCTTGGCAGTCTGATCGACGC
AGCCGCCGGTCAGGGTGCGTCTTTCATTTCCGACGAAATCTATCATGGCATCGAATATGAGGCCAAGGCGGTCACCGCGC
TGCAGGTGACGGATGAGGCCTATGTGATCAATTCGTTTTCCAAGTATTTCTCCATGACAGGCTGGCGGGTGGGCTGGCTG
GTTGTCCCGGAGGATCATGTGCGCGTTGTTGAGCGGATTGCGCAGAACATGTTCATCTGCGCGCCTCATGCCAGTCAGAT
TGCCGCCCTTGCCGCGATGGATGCCGAAGAGGAATTGCAAGCCAACATGGATGTGTACCGGGTTAACCGCAAACTGATGC
TTGAAGGCTTGCCAGAGGCCGGGTTCACGAAGATCGCGCCGCCCGATGGAGCGTTTTATGTCTATGCGGATGTATCGGAT
ATGACCGATGACAGCCGCGCCTTTGCGGCGGAAATCCTCGAACAGGCAGGTGTGGCCGTCACGCCCGGGCTTGATTTTGA
CCCGGTGCGCGGGCATCAGACGCTGCGGTTTTCCTATGCCCGCTCGACTGCGGATATTGCCGAAGGGCTCGCGCGGCTCA
AGGCGTTCTTGCAGGCGCGCTGA

Upstream 100 bases:

>100_bases
CGCTGACACTGTCTGTGCAAACAGACAAAAGATCAGCATCGGGATTGACGCCCGCCGGAATACGCGATGAAAGCACATGT
CACCATAAGGAGCGGTTTTC

Downstream 100 bases:

>100_bases
GCCATTCCCTCAAGGCGCAAGGTGGTGTAGGGTCGGGCAAAACAAATCGGCCGAGCAGCCCATGATCCGATACGTGAGAC
TTTGCGCCCTTGTCCTGGGC

Product: aspartate aminotransferase, putative

Products: NA

Alternate protein names: AspAT; Transaminase A [H]

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MRVSRRSSVDPFIVMDVMEAAHRAEAAGRHIIHMEVGQPGTGAPKAAVSALADAMGREALGYTVALGLPALRDRIARLYG
EWYDVDLDPRRVIITPGSSGGFILAFTALFDTGDRVGIGAPGYPSYRQILRALDLCPVDIATAPENRFQPVASDLEGRDL
AGLMVASPANPTGTMLDKAALGSLIDAAAGQGASFISDEIYHGIEYEAKAVTALQVTDEAYVINSFSKYFSMTGWRVGWL
VVPEDHVRVVERIAQNMFICAPHASQIAALAAMDAEEELQANMDVYRVNRKLMLEGLPEAGFTKIAPPDGAFYVYADVSD
MTDDSRAFAAEILEQAGVAVTPGLDFDPVRGHQTLRFSYARSTADIAEGLARLKAFLQAR

Sequences:

>Translated_380_residues
MRVSRRSSVDPFIVMDVMEAAHRAEAAGRHIIHMEVGQPGTGAPKAAVSALADAMGREALGYTVALGLPALRDRIARLYG
EWYDVDLDPRRVIITPGSSGGFILAFTALFDTGDRVGIGAPGYPSYRQILRALDLCPVDIATAPENRFQPVASDLEGRDL
AGLMVASPANPTGTMLDKAALGSLIDAAAGQGASFISDEIYHGIEYEAKAVTALQVTDEAYVINSFSKYFSMTGWRVGWL
VVPEDHVRVVERIAQNMFICAPHASQIAALAAMDAEEELQANMDVYRVNRKLMLEGLPEAGFTKIAPPDGAFYVYADVSD
MTDDSRAFAAEILEQAGVAVTPGLDFDPVRGHQTLRFSYARSTADIAEGLARLKAFLQAR
>Mature_380_residues
MRVSRRSSVDPFIVMDVMEAAHRAEAAGRHIIHMEVGQPGTGAPKAAVSALADAMGREALGYTVALGLPALRDRIARLYG
EWYDVDLDPRRVIITPGSSGGFILAFTALFDTGDRVGIGAPGYPSYRQILRALDLCPVDIATAPENRFQPVASDLEGRDL
AGLMVASPANPTGTMLDKAALGSLIDAAAGQGASFISDEIYHGIEYEAKAVTALQVTDEAYVINSFSKYFSMTGWRVGWL
VVPEDHVRVVERIAQNMFICAPHASQIAALAAMDAEEELQANMDVYRVNRKLMLEGLPEAGFTKIAPPDGAFYVYADVSD
MTDDSRAFAAEILEQAGVAVTPGLDFDPVRGHQTLRFSYARSTADIAEGLARLKAFLQAR

Specific function: Unknown

COG id: COG0436

COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI95147551, Length=395, Percent_Identity=24.5569620253165, Blast_Score=108, Evalue=1e-23,
Organism=Homo sapiens, GI169881279, Length=395, Percent_Identity=24.5569620253165, Blast_Score=108, Evalue=1e-23,
Organism=Homo sapiens, GI56713254, Length=329, Percent_Identity=25.531914893617, Blast_Score=99, Evalue=8e-21,
Organism=Homo sapiens, GI56713256, Length=329, Percent_Identity=25.531914893617, Blast_Score=99, Evalue=9e-21,
Organism=Homo sapiens, GI4507369, Length=229, Percent_Identity=24.4541484716157, Blast_Score=71, Evalue=2e-12,
Organism=Escherichia coli, GI1788722, Length=390, Percent_Identity=26.6666666666667, Blast_Score=121, Evalue=8e-29,
Organism=Escherichia coli, GI1786816, Length=384, Percent_Identity=28.3854166666667, Blast_Score=119, Evalue=3e-28,
Organism=Escherichia coli, GI1788627, Length=386, Percent_Identity=24.6113989637306, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1790797, Length=325, Percent_Identity=22.7692307692308, Blast_Score=63, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI71994472, Length=393, Percent_Identity=24.4274809160305, Blast_Score=100, Evalue=9e-22,
Organism=Caenorhabditis elegans, GI71994476, Length=393, Percent_Identity=24.4274809160305, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17567663, Length=404, Percent_Identity=21.7821782178218, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17567369, Length=305, Percent_Identity=22.9508196721311, Blast_Score=79, Evalue=6e-15,
Organism=Saccharomyces cerevisiae, GI6322401, Length=396, Percent_Identity=21.2121212121212, Blast_Score=85, Evalue=2e-17,
Organism=Drosophila melanogaster, GI18859735, Length=358, Percent_Identity=24.0223463687151, Blast_Score=82, Evalue=4e-16,
Organism=Drosophila melanogaster, GI28573069, Length=317, Percent_Identity=21.7665615141956, Blast_Score=76, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24646114, Length=317, Percent_Identity=21.7665615141956, Blast_Score=76, Evalue=3e-14,
Organism=Drosophila melanogaster, GI28573067, Length=317, Percent_Identity=21.7665615141956, Blast_Score=76, Evalue=3e-14,
Organism=Drosophila melanogaster, GI28573065, Length=317, Percent_Identity=21.7665615141956, Blast_Score=76, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001176
- InterPro:   IPR004839
- InterPro:   IPR004838
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: =2.6.1.1 [H]

Molecular weight: Translated: 40943; Mature: 40943

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: PS00105 AA_TRANSFER_CLASS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVSRRSSVDPFIVMDVMEAAHRAEAAGRHIIHMEVGQPGTGAPKAAVSALADAMGREAL
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCHHH
GYTVALGLPALRDRIARLYGEWYDVDLDPRRVIITPGSSGGFILAFTALFDTGDRVGIGA
CEEEECCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCEEEEEEEHHCCCCCCCCCC
PGYPSYRQILRALDLCPVDIATAPENRFQPVASDLEGRDLAGLMVASPANPTGTMLDKAA
CCCHHHHHHHHHHCCCCCCCCCCCCHHCCHHHHCCCCCCEEEEEEECCCCCCHHHHHHHH
LGSLIDAAAGQGASFISDEIYHGIEYEAKAVTALQVTDEAYVINSFSKYFSMTGWRVGWL
HHHHHHHHCCCCCHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHHHCCCCEEEEE
VVPEDHVRVVERIAQNMFICAPHASQIAALAAMDAEEELQANMDVYRVNRKLMLEGLPEA
EECHHHHHHHHHHHHCEEEECCCHHHHHHHHHCCCHHHHHCCCHHHHHCHHHHCCCCCCC
GFTKIAPPDGAFYVYADVSDMTDDSRAFAAEILEQAGVAVTPGLDFDPVRGHQTLRFSYA
CCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCEEEEEHH
RSTADIAEGLARLKAFLQAR
HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRVSRRSSVDPFIVMDVMEAAHRAEAAGRHIIHMEVGQPGTGAPKAAVSALADAMGREAL
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCHHH
GYTVALGLPALRDRIARLYGEWYDVDLDPRRVIITPGSSGGFILAFTALFDTGDRVGIGA
CEEEECCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCEEEEEEEHHCCCCCCCCCC
PGYPSYRQILRALDLCPVDIATAPENRFQPVASDLEGRDLAGLMVASPANPTGTMLDKAA
CCCHHHHHHHHHHCCCCCCCCCCCCHHCCHHHHCCCCCCEEEEEEECCCCCCHHHHHHHH
LGSLIDAAAGQGASFISDEIYHGIEYEAKAVTALQVTDEAYVINSFSKYFSMTGWRVGWL
HHHHHHHHCCCCCHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHHHCCCCEEEEE
VVPEDHVRVVERIAQNMFICAPHASQIAALAAMDAEEELQANMDVYRVNRKLMLEGLPEA
EECHHHHHHHHHHHHCEEEECCCHHHHHHHHHCCCHHHHHCCCHHHHHCHHHHCCCCCCC
GFTKIAPPDGAFYVYADVSDMTDDSRAFAAEILEQAGVAVTPGLDFDPVRGHQTLRFSYA
CCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCEEEEEHH
RSTADIAEGLARLKAFLQAR
HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]