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The map label for this gene is 110680025

Identifier: 110680025

GI number: 110680025

Start: 2686539

End: 2687300

Strand: Reverse

Name: 110680025

Synonym: RD1_2818

Alternate gene names: NA

Gene position: 2687300-2686539 (Counterclockwise)

Preceding gene: 110680026

Following gene: 110680021

Centisome position: 65.02

GC content: 55.77

Gene sequence:

>762_bases
TTGAAACCGGGTGCGCCGGAGTTGCGCGATGCCAATTTCGACATGCTGCGTGCCGCTTTGAAAAAGGGCGCGTCCGATTT
CCGGGCAAAACCGCTTTATGGAATTCTCTTTGCCGCGTTTTACGTGCTTGCAGGCTGGGTTATGGCGGTCATCACGGCTC
AGACCGGGCATACGTTCTGGTTGGTGCTGGCGGCGATTGGCTTTCCGCTGCTGGGGCCTTTTGCGGCTGTCGGACTCTAT
GAGGTGTCGCGCAGGCTCGAAGCGGGTCTGCCTGTGCCCGCCGGAGAAATCTTTGGCGTGATCCTGAACCAGCGCCATCG
GCAGTTGCCTTCCATGTGCACGATGATGGTGGTGATTTTCATGTTCTGGTTTTTTCTGGGTCACATGATCTTTGCCCTGT
TTCTCGGGCTGTCCACAATGACCAACGTGTCGACGTCCTTTGAGGTCTTTCTGACCACAAATGGGTTGATGATGCTCGCA
TTCGGTACGGCAGTTGGCGCAGGTTTTGCGGTGTTGATTTTCTCGATTGCCGTGATCGGGTTGCCGTTGTTGCTGGACCG
GGAAATCGATTTTGTCACCGCCATGATCACCAGCATTCAGGCGGTCCGATCCTCGCCCTTCGTTTTCATGGTCTGGGCCG
CCTTTATTGCTGTTGTGGTGTTCGCCTCCATGCTGCCGGGCTTCTTTGGTCTTTTCATCACGCTGCCCTTGCTGGGGCAC
AGTTCATGGCATCTCTATCGCGAGATGATCGTAAGCCCCTGA

Upstream 100 bases:

>100_bases
GCTGATCAATTCCATTTTGACATGCGACCGCAACTCGGGCACGTTTTAGTCGGTTGAGTACGAAGAGGAGACTTCCGTGG
CGGCGATTGCAGAGGGAGAA

Downstream 100 bases:

>100_bases
AGATGTGTAAAACCTCGATCACCTAACGCTGCCTGAAATCAGGGAGCTGAACGTGTTAGGTGATACTTGCTGTGTCAGGT
ATTCTGTCAGCCGCTCTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: Cytochrome C Oxidase Subunit I; Integral Membrane-Like Protein; Conserved Integral Membrane Protein; Integral Membrane Protein-Like Protein; Integral Membrane Protein-Like; Transmembrane Protein; Integral Membrane

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MKPGAPELRDANFDMLRAALKKGASDFRAKPLYGILFAAFYVLAGWVMAVITAQTGHTFWLVLAAIGFPLLGPFAAVGLY
EVSRRLEAGLPVPAGEIFGVILNQRHRQLPSMCTMMVVIFMFWFFLGHMIFALFLGLSTMTNVSTSFEVFLTTNGLMMLA
FGTAVGAGFAVLIFSIAVIGLPLLLDREIDFVTAMITSIQAVRSSPFVFMVWAAFIAVVVFASMLPGFFGLFITLPLLGH
SSWHLYREMIVSP

Sequences:

>Translated_253_residues
MKPGAPELRDANFDMLRAALKKGASDFRAKPLYGILFAAFYVLAGWVMAVITAQTGHTFWLVLAAIGFPLLGPFAAVGLY
EVSRRLEAGLPVPAGEIFGVILNQRHRQLPSMCTMMVVIFMFWFFLGHMIFALFLGLSTMTNVSTSFEVFLTTNGLMMLA
FGTAVGAGFAVLIFSIAVIGLPLLLDREIDFVTAMITSIQAVRSSPFVFMVWAAFIAVVVFASMLPGFFGLFITLPLLGH
SSWHLYREMIVSP
>Mature_253_residues
MKPGAPELRDANFDMLRAALKKGASDFRAKPLYGILFAAFYVLAGWVMAVITAQTGHTFWLVLAAIGFPLLGPFAAVGLY
EVSRRLEAGLPVPAGEIFGVILNQRHRQLPSMCTMMVVIFMFWFFLGHMIFALFLGLSTMTNVSTSFEVFLTTNGLMMLA
FGTAVGAGFAVLIFSIAVIGLPLLLDREIDFVTAMITSIQAVRSSPFVFMVWAAFIAVVVFASMLPGFFGLFITLPLLGH
SSWHLYREMIVSP

Specific function: Unknown

COG id: COG5473

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27736; Mature: 27736

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CHHHHHHHHHCCC
>Mature Secondary Structure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CHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA