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The map label for this gene is 110680016

Identifier: 110680016

GI number: 110680016

Start: 2677095

End: 2678183

Strand: Reverse

Name: 110680016

Synonym: RD1_2809

Alternate gene names: NA

Gene position: 2678183-2677095 (Counterclockwise)

Preceding gene: 110680021

Following gene: 110680015

Centisome position: 64.8

GC content: 59.6

Gene sequence:

>1089_bases
ATGGATCGTCGATCATTTCTGAAGACATCTGCACTTGGCGGCTCTGCCGCTGCGGCCACGACCCTGGCTGCACCAGCCTA
CGCACAGGGCAACCGCACCCTGACAATGGTCACATCCTGGCCCCGCGGTTTTGCCGTGCTGGACGACGCGGCAACCTATT
TCAATGAGATGGTCGATGCGATGTCCGATGGGCAACTGACAATCGACAAGAAAGCGCCGGGCGAGCTGGTTGGCGCCTTT
GAGGTGTTTGACGCGGTGTCCTCCGGACAGGCGGACCTTTACCACTCGGCGGATTACTATTTCATCGGTCAGCACCCGGG
CTATGCCTATTTCACCGCCGTGCCATTCGGTGGCACCGCGCAGGAAGTCACAAACTGGTATCACCACGGTGGCGGACATG
AACTGCACACCGAACTGGGCGAGATCTTCAACCTGAAATCCTTCATCGCGGGCAACTCCGGGTCGCAGTCGGGTGGCTGG
TTCCGCAACGAGATCAACTCGGCGGATGATTTCAACGGTCTGAAGTTCCGTATGCCGGGTCTTGGCGGCAAGGTGCTCGG
CGAGTTGGGTGCTTCGGTTCAGAACATTCCCGGTGGTGAGCTTTATCAGGCGCTGTCCTCCGGCGCGCTTGACGGTCTTG
AGTGGGTTGGCCCCTTCGCCGATGAACGCGCAGGCTTCCAGGAAGTCGCCAAAGTCTACTACACCGCTGGTTTCCACGAG
CCGGGCTCCGCTTTGGCGGCAGGTGTGAACCTTGACGTCTGGAACGACCTCAAGCCAGCGCATCAGGCGATCATCTCGAA
CGCGGCGATGGCGACAACACATACACAGCTGGCCGAAACGCTGGCAAACAACGGTGCCGCTCTGGCGCGTCTGCAATCGC
AGGGCGTGAAAACGCTGCAGTTCCCGGATGATGTCTGGGATGCATTCGGGGCCGCGTCCAAAACCGTCATGGATGAGAAC
ATGGGCGATGAGCTCTTTGCAACAATCCGTGGCTCGTTCGAAGAATCGCTCGCGCAAAGCTCGGACTGGCTTCTGAAGTC
GGACAGCTTCTATGTCGAGCAGCGTAACCGCGTGCTGTCCGCCGGGTAA

Upstream 100 bases:

>100_bases
GTATTCCCTTCTGCGCTCACCACGCTACTTTCGCGATCACTTCACAAGCCGTGTGCGCCACAAGGAGCGGACAGGCGTTA
CAATCGGGAGGAGTATCTTT

Downstream 100 bases:

>100_bases
GGCGCGCCACTGACACCGCAGGGGGCAGGCTTCACCTTGCCCCTTGCATGATCGACATCTCAGGTTAACACTGAGCCAAA
ACATATTTTGACCCGCGCGG

Product: periplasmic mannitol-binding protein, putative

Products: NA

Alternate protein names: Twin-Arginine Translocation Pathway Signal; TRAP Dicarboxylate Transporter Subunit DctP; Trap Dicarboxylate Transporter- Dctp Subunit; Trap Dicarboxylate Transporter; Transporter Periplasmic Component; TRAP Mannitol/C4-Dicarboxylate Transporter; TRAP-Type Mannitol/Chloroaromatic Compound Transport System; TRAP Dicarboxylate Transporter- Dctp Subunit; TRAP Dicarboxylate Transporter DctP Subunit; Tat Pathway Signal Sequence Domain-Containing Protein; Periplasmic TRAP-Type Dicarboxylate Transporter Protein; Trap-T Transport System Periplasmic Component; TRAP Dicarboxylate Transporter-DctP Subunit; C4-Dicarboxylate Transporter; TRAP Transporter; Tat Pathway Signal Sequence Domain-Containing; TRAP Dicarboxylate Transporter

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MDRRSFLKTSALGGSAAAATTLAAPAYAQGNRTLTMVTSWPRGFAVLDDAATYFNEMVDAMSDGQLTIDKKAPGELVGAF
EVFDAVSSGQADLYHSADYYFIGQHPGYAYFTAVPFGGTAQEVTNWYHHGGGHELHTELGEIFNLKSFIAGNSGSQSGGW
FRNEINSADDFNGLKFRMPGLGGKVLGELGASVQNIPGGELYQALSSGALDGLEWVGPFADERAGFQEVAKVYYTAGFHE
PGSALAAGVNLDVWNDLKPAHQAIISNAAMATTHTQLAETLANNGAALARLQSQGVKTLQFPDDVWDAFGAASKTVMDEN
MGDELFATIRGSFEESLAQSSDWLLKSDSFYVEQRNRVLSAG

Sequences:

>Translated_362_residues
MDRRSFLKTSALGGSAAAATTLAAPAYAQGNRTLTMVTSWPRGFAVLDDAATYFNEMVDAMSDGQLTIDKKAPGELVGAF
EVFDAVSSGQADLYHSADYYFIGQHPGYAYFTAVPFGGTAQEVTNWYHHGGGHELHTELGEIFNLKSFIAGNSGSQSGGW
FRNEINSADDFNGLKFRMPGLGGKVLGELGASVQNIPGGELYQALSSGALDGLEWVGPFADERAGFQEVAKVYYTAGFHE
PGSALAAGVNLDVWNDLKPAHQAIISNAAMATTHTQLAETLANNGAALARLQSQGVKTLQFPDDVWDAFGAASKTVMDEN
MGDELFATIRGSFEESLAQSSDWLLKSDSFYVEQRNRVLSAG
>Mature_362_residues
MDRRSFLKTSALGGSAAAATTLAAPAYAQGNRTLTMVTSWPRGFAVLDDAATYFNEMVDAMSDGQLTIDKKAPGELVGAF
EVFDAVSSGQADLYHSADYYFIGQHPGYAYFTAVPFGGTAQEVTNWYHHGGGHELHTELGEIFNLKSFIAGNSGSQSGGW
FRNEINSADDFNGLKFRMPGLGGKVLGELGASVQNIPGGELYQALSSGALDGLEWVGPFADERAGFQEVAKVYYTAGFHE
PGSALAAGVNLDVWNDLKPAHQAIISNAAMATTHTQLAETLANNGAALARLQSQGVKTLQFPDDVWDAFGAASKTVMDEN
MGDELFATIRGSFEESLAQSSDWLLKSDSFYVEQRNRVLSAG

Specific function: Unknown

COG id: COG4663

COG function: function code Q; TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38658; Mature: 38658

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRRSFLKTSALGGSAAAATTLAAPAYAQGNRTLTMVTSWPRGFAVLDDAATYFNEMVDA
CCHHHHHHHHCCCCCHHHHHHHCCCCCCCCCEEEEEEEECCCCCEEHHHHHHHHHHHHHH
MSDGQLTIDKKAPGELVGAFEVFDAVSSGQADLYHSADYYFIGQHPGYAYFTAVPFGGTA
HCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCEEECCCEEEEECCCCEEEEEEECCCCCH
QEVTNWYHHGGGHELHTELGEIFNLKSFIAGNSGSQSGGWFRNEINSADDFNGLKFRMPG
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCEEEECCC
LGGKVLGELGASVQNIPGGELYQALSSGALDGLEWVGPFADERAGFQEVAKVYYTAGFHE
CCHHHHHHHCCHHCCCCCHHHHHHHHHCCCCCHHHCCCCHHHHCCHHHHHHHHHHCCCCC
PGSALAAGVNLDVWNDLKPAHQAIISNAAMATTHTQLAETLANNGAALARLQSQGVKTLQ
CCHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEE
FPDDVWDAFGAASKTVMDENMGDELFATIRGSFEESLAQSSDWLLKSDSFYVEQRNRVLS
CCHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCEEEHHHCCCCC
AG
CC
>Mature Secondary Structure
MDRRSFLKTSALGGSAAAATTLAAPAYAQGNRTLTMVTSWPRGFAVLDDAATYFNEMVDA
CCHHHHHHHHCCCCCHHHHHHHCCCCCCCCCEEEEEEEECCCCCEEHHHHHHHHHHHHHH
MSDGQLTIDKKAPGELVGAFEVFDAVSSGQADLYHSADYYFIGQHPGYAYFTAVPFGGTA
HCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCEEECCCEEEEECCCCEEEEEEECCCCCH
QEVTNWYHHGGGHELHTELGEIFNLKSFIAGNSGSQSGGWFRNEINSADDFNGLKFRMPG
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCEEEECCC
LGGKVLGELGASVQNIPGGELYQALSSGALDGLEWVGPFADERAGFQEVAKVYYTAGFHE
CCHHHHHHHCCHHCCCCCHHHHHHHHHCCCCCHHHCCCCHHHHCCHHHHHHHHHHCCCCC
PGSALAAGVNLDVWNDLKPAHQAIISNAAMATTHTQLAETLANNGAALARLQSQGVKTLQ
CCHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEE
FPDDVWDAFGAASKTVMDENMGDELFATIRGSFEESLAQSSDWLLKSDSFYVEQRNRVLS
CCHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCEEEHHHCCCCC
AG
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA