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The map label for this gene is 110680015

Identifier: 110680015

GI number: 110680015

Start: 2676039

End: 2676716

Strand: Reverse

Name: 110680015

Synonym: RD1_2807

Alternate gene names: NA

Gene position: 2676716-2676039 (Counterclockwise)

Preceding gene: 110680016

Following gene: 110680014

Centisome position: 64.76

GC content: 56.49

Gene sequence:

>678_bases
ATGTGGGGCTACGTGCGCGTGCTCGAAGGCTTCGCCAATACGGTGGGGCGCTTTTTTGCCTGGGCCGGGCTCTTGATGGT
GATCCAGCAGATCATCATCGTCTTCATGCAGCGGATTTTCACGCGCCCGGATATTTCCTTTGGCTTTGGTATCCCGCTGC
AGTTCGACATCAGCTGGTTTGCCGAAGAACTCAAGCTTTACAACGCGATGGTCGTGTGTCTGTGCATGGCCTACACCTTC
GTTCAGGGCGGTCATGTGCGCGTCGATCTGATCTATTCCTCGGTGCGTTTCCGCACCAAGAAAGTCATCGACATGTTCGG
GGCGCTCTTTTTCATGATGCCCGTCGCGGTGATCATCTGGCTTTACGGCTGGTTCTTCATGTGGCGTCACCTGATCGTGC
CCAACCCTTCTGCATCTGACACGCTGGACCGTTTGCTGAACAAGTCCCGCGCGCTGCGCTGGAATGTCGAAACCATCGGC
TTCAGCCCGAACGGGTTCAACGGATATTTCCTCTTCAAGGTGCTTTTGTGCATGTTCACCGCGATGGTGTTCCTGCAGGC
GATGGCCATGTTCTTCCGCTCCTTCCAGGAGTGGCGCGAAGGCGAGGAGAGCGCGGGCAAATACCTCGACAAGGACACCC
TTGGCGATGGTGAAGAAGCCTATGAGGGCACGCACTGA

Upstream 100 bases:

>100_bases
CATGCGGTTTGTCTACTACGGCGGTTCGGTCGAATTCTTCTTTGTCGTGTTTACCGCTTTCCTCGTGATGCTCAGTATCG
GGATATGGCGCGCCAACATC

Downstream 100 bases:

>100_bases
CAAGGCGCGCAACAACGCAAGAACAAGCGCCTCAAGCGCGTGACGTATAAGGGACAAAGCCCATGTTTTTCGGTCTAGAC
GGCGTAGAAGTTGGCCTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MWGYVRVLEGFANTVGRFFAWAGLLMVIQQIIIVFMQRIFTRPDISFGFGIPLQFDISWFAEELKLYNAMVVCLCMAYTF
VQGGHVRVDLIYSSVRFRTKKVIDMFGALFFMMPVAVIIWLYGWFFMWRHLIVPNPSASDTLDRLLNKSRALRWNVETIG
FSPNGFNGYFLFKVLLCMFTAMVFLQAMAMFFRSFQEWREGEESAGKYLDKDTLGDGEEAYEGTH

Sequences:

>Translated_225_residues
MWGYVRVLEGFANTVGRFFAWAGLLMVIQQIIIVFMQRIFTRPDISFGFGIPLQFDISWFAEELKLYNAMVVCLCMAYTF
VQGGHVRVDLIYSSVRFRTKKVIDMFGALFFMMPVAVIIWLYGWFFMWRHLIVPNPSASDTLDRLLNKSRALRWNVETIG
FSPNGFNGYFLFKVLLCMFTAMVFLQAMAMFFRSFQEWREGEESAGKYLDKDTLGDGEEAYEGTH
>Mature_225_residues
MWGYVRVLEGFANTVGRFFAWAGLLMVIQQIIIVFMQRIFTRPDISFGFGIPLQFDISWFAEELKLYNAMVVCLCMAYTF
VQGGHVRVDLIYSSVRFRTKKVIDMFGALFFMMPVAVIIWLYGWFFMWRHLIVPNPSASDTLDRLLNKSRALRWNVETIG
FSPNGFNGYFLFKVLLCMFTAMVFLQAMAMFFRSFQEWREGEESAGKYLDKDTLGDGEEAYEGTH

Specific function: Unknown

COG id: COG4665

COG function: function code Q; TRAP-type mannitol/chloroaromatic compound transport system, small permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26200; Mature: 26200

Theoretical pI: Translated: 7.43; Mature: 7.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWGYVRVLEGFANTVGRFFAWAGLLMVIQQIIIVFMQRIFTRPDISFGFGIPLQFDISWF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHH
AEELKLYNAMVVCLCMAYTFVQGGHVRVDLIYSSVRFRTKKVIDMFGALFFMMPVAVIIW
HHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYGWFFMWRHLIVPNPSASDTLDRLLNKSRALRWNVETIGFSPNGFNGYFLFKVLLCMFT
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCEEECCEEECCCCCCCCHHHHHHHHHHHHH
AMVFLQAMAMFFRSFQEWREGEESAGKYLDKDTLGDGEEAYEGTH
HHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHCCCCC
>Mature Secondary Structure
MWGYVRVLEGFANTVGRFFAWAGLLMVIQQIIIVFMQRIFTRPDISFGFGIPLQFDISWF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHH
AEELKLYNAMVVCLCMAYTFVQGGHVRVDLIYSSVRFRTKKVIDMFGALFFMMPVAVIIW
HHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYGWFFMWRHLIVPNPSASDTLDRLLNKSRALRWNVETIGFSPNGFNGYFLFKVLLCMFT
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCEEECCEEECCCCCCCCHHHHHHHHHHHHH
AMVFLQAMAMFFRSFQEWREGEESAGKYLDKDTLGDGEEAYEGTH
HHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA