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The map label for this gene is iscR [H]

Identifier: 110679918

GI number: 110679918

Start: 2571118

End: 2571591

Strand: Reverse

Name: iscR [H]

Synonym: RD1_2700

Alternate gene names: 110679918

Gene position: 2571591-2571118 (Counterclockwise)

Preceding gene: 110679923

Following gene: 110679917

Centisome position: 62.22

GC content: 61.39

Gene sequence:

>474_bases
ATGAAACTCTCAACAAAAGGGCGATATGCGATGGTGGCGCTGGCGGATATCGCGATGCAGCCGCAGGACAAACTGGTCTC
GCTGGGGGATATCGCGACGCGGCAGGCGATCTCGCTGGCCTATCTGGAACAGCTGTTTGTCAAGCTGCGCCGTGCCGAAC
TTGTCGCATCCGTGCGTGGACCGGGGGGCGGGTATCGCTTGACGCGCTCGCCGTCCGACATCCGGGTTGTGGAAATCCTG
AGCGCGGTGGATGAAACCGTGGATGCGATGCACAAGGGGGCAGGGGCCTCCGGGGGCGCTTCCGGCAGTCAGGCGCAGTC
TCTGACCAACCGCCTGTGGGAAAGTCTGAGCGCGCATGTCTATGTATTTCTGCACCAAACGCGGCTGTCGGATGTGATTG
CCAATGAACTCGCACCCTGTCCTGCGGTGCCCAACCTGTTCGACATCGTGGATGAGCCGACAGAACCCGCCTAA

Upstream 100 bases:

>100_bases
TTAGATCGCAGAAAACAACATCTGCTGCGGACTATGGCCTTAAGGTTTAACGCGCCCGACGTCAATCAATTGACGGGCGC
GCGGGTATCAAGGAACTGCG

Downstream 100 bases:

>100_bases
AAGCGCGTCCACCTTTATGAAAGCCGAGATGTGAGACGAATTTACCTCGATCACAATGCGACTGCACCGCTGCGCCCGGA
GGCGCGCGCGGCGATGCTGG

Product: transcriptional regulator, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MKLSTKGRYAMVALADIAMQPQDKLVSLGDIATRQAISLAYLEQLFVKLRRAELVASVRGPGGGYRLTRSPSDIRVVEIL
SAVDETVDAMHKGAGASGGASGSQAQSLTNRLWESLSAHVYVFLHQTRLSDVIANELAPCPAVPNLFDIVDEPTEPA

Sequences:

>Translated_157_residues
MKLSTKGRYAMVALADIAMQPQDKLVSLGDIATRQAISLAYLEQLFVKLRRAELVASVRGPGGGYRLTRSPSDIRVVEIL
SAVDETVDAMHKGAGASGGASGSQAQSLTNRLWESLSAHVYVFLHQTRLSDVIANELAPCPAVPNLFDIVDEPTEPA
>Mature_157_residues
MKLSTKGRYAMVALADIAMQPQDKLVSLGDIATRQAISLAYLEQLFVKLRRAELVASVRGPGGGYRLTRSPSDIRVVEIL
SAVDETVDAMHKGAGASGGASGSQAQSLTNRLWESLSAHVYVFLHQTRLSDVIANELAPCPAVPNLFDIVDEPTEPA

Specific function: Regulates the transcription of several operons and genes involved in the biogenesis of Fe-S clusters and Fe-S-containing proteins [H]

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788880, Length=136, Percent_Identity=44.8529411764706, Blast_Score=114, Evalue=4e-27,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010242
- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 16818; Mature: 16818

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLSTKGRYAMVALADIAMQPQDKLVSLGDIATRQAISLAYLEQLFVKLRRAELVASVRG
CCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PGGGYRLTRSPSDIRVVEILSAVDETVDAMHKGAGASGGASGSQAQSLTNRLWESLSAHV
CCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCEE
YVFLHQTRLSDVIANELAPCPAVPNLFDIVDEPTEPA
EEEEHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCC
>Mature Secondary Structure
MKLSTKGRYAMVALADIAMQPQDKLVSLGDIATRQAISLAYLEQLFVKLRRAELVASVRG
CCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PGGGYRLTRSPSDIRVVEILSAVDETVDAMHKGAGASGGASGSQAQSLTNRLWESLSAHV
CCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCEE
YVFLHQTRLSDVIANELAPCPAVPNLFDIVDEPTEPA
EEEEHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA