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The map label for this gene is 110679904

Identifier: 110679904

GI number: 110679904

Start: 2556022

End: 2556807

Strand: Reverse

Name: 110679904

Synonym: RD1_2682

Alternate gene names: NA

Gene position: 2556807-2556022 (Counterclockwise)

Preceding gene: 110679910

Following gene: 110679903

Centisome position: 61.86

GC content: 61.07

Gene sequence:

>786_bases
GTGTTGCTTCTGGTTTGTCCATGCCGGAGTGGATCGACGATCCTGCTGCGCGCCTTCGGGCATGCCGGGCTGCCGGCGTA
TTTTCAGCCGATCAAGAACGCGTGCCGCTGGCGCTATGAAGGGCAGGAGCATCCTTGGTCGCCGCCGGTCTGTTCCAAGG
ATCATGCGATTTTCATGAAGGAGACATTTGGACCCTTTCACCTTGAAGAGACGACCTATGACCCGCTGTCTGAGTTGCTG
GCGACGAACCTGTCGGCGGATCGCATCGCATTGGTGGTCCTGTTGCGCGACCCGGCCGCGGTTTGGGCCTCCTGGCGCTA
TTACTGGGCGCAGCGCACCTCTTATGAGGTTTTCGCACAGGCCTGGGCCGCATGTCAGCGCAGCGTGCAGCGGGCATCCA
TGGCCAGAGTTCCTGCATACGCCCTGTCTTACGACGATCTGTGCCGGAACCCGGCCTTTGAACTCTCGGCGCTCTTTGCG
GCGATCGGGCGGGAGTTTCCCTCCGACGCGTTGAAGGGTTGGGACAGAAAACCGGGGTTCGGGGCCGCAGGGTCCGGGGT
GATGCTGCCGAACGAACCGCAAGCCTTCCTGACGCCGAAGGCACATGAACCGGTGATCCGAGCCACGGGCATCCGTCCGA
TGAAACCGGCAGGCGTGATCACTTTGCAGGAACGTGAGAGATTGTCGGCACTCGGCGTTTTTGAACGCTATGACGCCTTG
TCCACCGCGCTGCCAAAGGTCGCGGAGTGCTTGAAACATCCGCTCGGGGAAAAAGGCGATGAATAG

Upstream 100 bases:

>100_bases
GAATTAAGTTCATTGATTTCAGGCTTTTATTTTGACAACCGGCACCGCATGCACAGCTCAAATGCCGCTCGTCTCACATT
GGGAGGCGACGCCCGAACGG

Downstream 100 bases:

>100_bases
GCGCATGAGATGGCATTTTCAAAAACCCGCGCACAGGGTCCGGCATCATGAGTGAGCCGACCCAACCCCCCGCGCGCCGT
GCGGGCCCGCCGCCAATTGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MLLLVCPCRSGSTILLRAFGHAGLPAYFQPIKNACRWRYEGQEHPWSPPVCSKDHAIFMKETFGPFHLEETTYDPLSELL
ATNLSADRIALVVLLRDPAAVWASWRYYWAQRTSYEVFAQAWAACQRSVQRASMARVPAYALSYDDLCRNPAFELSALFA
AIGREFPSDALKGWDRKPGFGAAGSGVMLPNEPQAFLTPKAHEPVIRATGIRPMKPAGVITLQERERLSALGVFERYDAL
STALPKVAECLKHPLGEKGDE

Sequences:

>Translated_261_residues
MLLLVCPCRSGSTILLRAFGHAGLPAYFQPIKNACRWRYEGQEHPWSPPVCSKDHAIFMKETFGPFHLEETTYDPLSELL
ATNLSADRIALVVLLRDPAAVWASWRYYWAQRTSYEVFAQAWAACQRSVQRASMARVPAYALSYDDLCRNPAFELSALFA
AIGREFPSDALKGWDRKPGFGAAGSGVMLPNEPQAFLTPKAHEPVIRATGIRPMKPAGVITLQERERLSALGVFERYDAL
STALPKVAECLKHPLGEKGDE
>Mature_261_residues
MLLLVCPCRSGSTILLRAFGHAGLPAYFQPIKNACRWRYEGQEHPWSPPVCSKDHAIFMKETFGPFHLEETTYDPLSELL
ATNLSADRIALVVLLRDPAAVWASWRYYWAQRTSYEVFAQAWAACQRSVQRASMARVPAYALSYDDLCRNPAFELSALFA
AIGREFPSDALKGWDRKPGFGAAGSGVMLPNEPQAFLTPKAHEPVIRATGIRPMKPAGVITLQERERLSALGVFERYDAL
STALPKVAECLKHPLGEKGDE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29041; Mature: 29041

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLLVCPCRSGSTILLRAFGHAGLPAYFQPIKNACRWRYEGQEHPWSPPVCSKDHAIFMK
CEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEE
ETFGPFHLEETTYDPLSELLATNLSADRIALVVLLRDPAAVWASWRYYWAQRTSYEVFAQ
CCCCCEEECCCCHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCHHHHHHH
AWAACQRSVQRASMARVPAYALSYDDLCRNPAFELSALFAAIGREFPSDALKGWDRKPGF
HHHHHHHHHHHHHHHHCCHHHCCHHHHHCCCHHHHHHHHHHHCCCCCHHHHCCCCCCCCC
GAAGSGVMLPNEPQAFLTPKAHEPVIRATGIRPMKPAGVITLQERERLSALGVFERYDAL
CCCCCCCCCCCCCCCEECCCCCCCCHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHH
STALPKVAECLKHPLGEKGDE
HHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MLLLVCPCRSGSTILLRAFGHAGLPAYFQPIKNACRWRYEGQEHPWSPPVCSKDHAIFMK
CEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEE
ETFGPFHLEETTYDPLSELLATNLSADRIALVVLLRDPAAVWASWRYYWAQRTSYEVFAQ
CCCCCEEECCCCHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCHHHHHHH
AWAACQRSVQRASMARVPAYALSYDDLCRNPAFELSALFAAIGREFPSDALKGWDRKPGF
HHHHHHHHHHHHHHHHCCHHHCCHHHHHCCCHHHHHHHHHHHCCCCCHHHHCCCCCCCCC
GAAGSGVMLPNEPQAFLTPKAHEPVIRATGIRPMKPAGVITLQERERLSALGVFERYDAL
CCCCCCCCCCCCCCCEECCCCCCCCHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHH
STALPKVAECLKHPLGEKGDE
HHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA