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The map label for this gene is 110679875

Identifier: 110679875

GI number: 110679875

Start: 2528469

End: 2529305

Strand: Reverse

Name: 110679875

Synonym: RD1_2649

Alternate gene names: NA

Gene position: 2529305-2528469 (Counterclockwise)

Preceding gene: 110679878

Following gene: 110679863

Centisome position: 61.2

GC content: 57.35

Gene sequence:

>837_bases
GTGACAAGCCCATGTATTCTGTGTGTGGCGATCACCGGCAGTGTGCCAATCAAGGCGGTGAACCCGGCGGTCCCAATCAC
CGTTAGTGAACAGATAGAAAGCACGCATGCGGCCTTTGAGGCTGGTGCCAGCATTTGTCATGCTCATGTACGAAACGCCG
ATGAAACCCCATCGTCTGATCCGGAGAAATTCGCGGCGCTCAAAGAAGGCATTGAAAAGCACTGTCCGGGCATGATTATT
CAGTTTTCGACCGGAGGTCGATCCGGTGCAGGTCGTGAGCGTGGCGGCATGTTGAAACTGCGTCCGGATATGGCCTCTCT
CTCAGTCGGGTCAAACAATTTCCCGACGCGCGTTTACGAAAATCCGCCGGATCTCGTAGCCTGGCTCGCCGGCGAAATGC
AGCGCTATGAAGTGACACCTGAGATCGAGGCGTTTGATCTCAGTCACATTCTGCAAGCAATGGCGATGCACCGCGCCGGT
AAACTGTTCGGTCGTTTGTATGTGCAGTTCGTTATGGGCGTCAAAAATGCGATGCCTGCAGACAAGCGGGTTTTCGACTT
TTACGTCGAGACGATGCACTCAAGAGCGCCCGATGGGGCATGGTGTGCTGCCGGGATTGGTGCTGCACAGATTGAGGTTA
ACGAGTGGGCCATCGCCGCCGGCGGTCATACCCGCGCAGGCCTTGAGGACAACGTGCGCCTTGACCGCAACACGCTTGCG
CCCTCGAATGCGGCGCTGATCAAACGGGCCGCTGAATTATGTGAAAAATACGAACGCCCCGTCGCGACCTGCGCCGAAGC
GCGCGCCATTCTCGGGCTGAGACCGACGCGCGTCTGA

Upstream 100 bases:

>100_bases
ATTTTATCATTGGCGTGTTGGTGTGCAATATGATGTGTCACCCGTTGCTCAGATATGATTTTGTCCGGTTTAGCGAATTC
TCGGTTAAAGGAGCTGAAAC

Downstream 100 bases:

>100_bases
CGTCCCTACCCCAGCGCGTATCCCGCGCCGCGCACCGTGCGCAGCGGATCCGAACCGCCAAACTGTGTCAGCGCCTTGCG
CAACCGTCCGATATGAACGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 278; Mature: 277

Protein sequence:

>278_residues
MTSPCILCVAITGSVPIKAVNPAVPITVSEQIESTHAAFEAGASICHAHVRNADETPSSDPEKFAALKEGIEKHCPGMII
QFSTGGRSGAGRERGGMLKLRPDMASLSVGSNNFPTRVYENPPDLVAWLAGEMQRYEVTPEIEAFDLSHILQAMAMHRAG
KLFGRLYVQFVMGVKNAMPADKRVFDFYVETMHSRAPDGAWCAAGIGAAQIEVNEWAIAAGGHTRAGLEDNVRLDRNTLA
PSNAALIKRAAELCEKYERPVATCAEARAILGLRPTRV

Sequences:

>Translated_278_residues
MTSPCILCVAITGSVPIKAVNPAVPITVSEQIESTHAAFEAGASICHAHVRNADETPSSDPEKFAALKEGIEKHCPGMII
QFSTGGRSGAGRERGGMLKLRPDMASLSVGSNNFPTRVYENPPDLVAWLAGEMQRYEVTPEIEAFDLSHILQAMAMHRAG
KLFGRLYVQFVMGVKNAMPADKRVFDFYVETMHSRAPDGAWCAAGIGAAQIEVNEWAIAAGGHTRAGLEDNVRLDRNTLA
PSNAALIKRAAELCEKYERPVATCAEARAILGLRPTRV
>Mature_277_residues
TSPCILCVAITGSVPIKAVNPAVPITVSEQIESTHAAFEAGASICHAHVRNADETPSSDPEKFAALKEGIEKHCPGMIIQ
FSTGGRSGAGRERGGMLKLRPDMASLSVGSNNFPTRVYENPPDLVAWLAGEMQRYEVTPEIEAFDLSHILQAMAMHRAGK
LFGRLYVQFVMGVKNAMPADKRVFDFYVETMHSRAPDGAWCAAGIGAAQIEVNEWAIAAGGHTRAGLEDNVRLDRNTLAP
SNAALIKRAAELCEKYERPVATCAEARAILGLRPTRV

Specific function: Unknown

COG id: COG3246

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29971; Mature: 29839

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSPCILCVAITGSVPIKAVNPAVPITVSEQIESTHAAFEAGASICHAHVRNADETPSSD
CCCCEEEEEEEECCCCEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PEKFAALKEGIEKHCPGMIIQFSTGGRSGAGRERGGMLKLRPDMASLSVGSNNFPTRVYE
HHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCEEEECCCHHHEECCCCCCCCCCCC
NPPDLVAWLAGEMQRYEVTPEIEAFDLSHILQAMAMHRAGKLFGRLYVQFVMGVKNAMPA
CCHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DKRVFDFYVETMHSRAPDGAWCAAGIGAAQIEVNEWAIAAGGHTRAGLEDNVRLDRNTLA
HHHHHHHHHHHHHHCCCCCCCHHCCCCEEEEEECCEEEEECCCCCCCCCCCCEECCCCCC
PSNAALIKRAAELCEKYERPVATCAEARAILGLRPTRV
CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TSPCILCVAITGSVPIKAVNPAVPITVSEQIESTHAAFEAGASICHAHVRNADETPSSD
CCCEEEEEEEECCCCEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PEKFAALKEGIEKHCPGMIIQFSTGGRSGAGRERGGMLKLRPDMASLSVGSNNFPTRVYE
HHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCEEEECCCHHHEECCCCCCCCCCCC
NPPDLVAWLAGEMQRYEVTPEIEAFDLSHILQAMAMHRAGKLFGRLYVQFVMGVKNAMPA
CCHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DKRVFDFYVETMHSRAPDGAWCAAGIGAAQIEVNEWAIAAGGHTRAGLEDNVRLDRNTLA
HHHHHHHHHHHHHHCCCCCCCHHCCCCEEEEEECCEEEEECCCCCCCCCCCCEECCCCCC
PSNAALIKRAAELCEKYERPVATCAEARAILGLRPTRV
CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA