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The map label for this gene is yicC [C]

Identifier: 110679864

GI number: 110679864

Start: 2517760

End: 2518650

Strand: Direct

Name: yicC [C]

Synonym: RD1_2637

Alternate gene names: 110679864

Gene position: 2517760-2518650 (Clockwise)

Preceding gene: 110679862

Following gene: 110679865

Centisome position: 60.92

GC content: 60.61

Gene sequence:

>891_bases
ATGCTGCGATCTATGACCGGATTTGCCTCGGCAACCGGCGGCCTTGCCCCCCATGCGTGGAATTGGGAACTGCGTTCGGT
GAACGGCAAGGGGCAGGATCTGCGCCTGCGGGTGCCTGACTGGATTGACGGGCTTGAGATCGGCCTGCGCAAGATGCTGG
CAGCCCAGACCGCGCGCGGCACGATCACGCTTTCTCTGCGACTGACGCGGGACGAGAACGCCACCACGCTGAAAATTAAC
CATGAACAGCTGCGCTGCGTCCTCCGGGCCATTGATCAGGTCGAAGCCGAAGCCGCAGCGATGGGCGTTGGTCTGACGCC
GTCAAAAGCCTCTGACATCGTTGCCATGCGCGGCGTTCTGGAGGCCGGATCGGTGGAGGATGACCCGGCACCGCTCACCA
AGCATCTGTTGGAAGAGGCAAAGACGCTGATCAGCGCGTTCAATGACATGCGCCGAGCCGAAGGGGCAGCCCTCGAAAAG
GTGCTGCTGTCTCAACTGGATGAGGTTGCGCAGCTGACGTCGCAGGCAAAGGAACATGCAAAAACGCGCAGTGCCGAGGC
AGGCGACATCCTGCGGCGCAATCTGCGGCGCGTGCTCGACAATATCGAGACTGTGGATGAGGACCGCCTTGCGCAGGAAC
TGGCGATGATTGCCGTCAAATCGGATGTCACCGAAGAGGTTGACCGCCTTGCGGCGCATGTCACCGCCGCGCGAGACCTG
ATCAGACAGGGTGGCCCAGTCGGGCGCAAGCTGGATTTTCTGATGCAGGAATTCAACCGGGAGGCCAATACGCTTTGCGC
CAAGGCGCAAAACACCGAATTGACACGCTGCGGTCTTGCACTGAAGGCAGTGATCGATCAGATGCGGGAGCAAGTACAGA
ATGTGGAGTAA

Upstream 100 bases:

>100_bases
GCGCTCATTTGCGCTGCGCGCCGCCCTGCGCACGGGGTTGCTCTGACCGCCTAAACTGCCATAAAGCAAGGCAATACTGG
CTGTACGAAAGGAAATGCGG

Downstream 100 bases:

>100_bases
CCGATGAAACCCATGCGCCGCGGACTTCTGATTATCCTCAGCTCACCCTCGGGCGCTGGCAAATCCACCTTGGCGCGGCG
GTTGCGGGACTGGGACACGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MLRSMTGFASATGGLAPHAWNWELRSVNGKGQDLRLRVPDWIDGLEIGLRKMLAAQTARGTITLSLRLTRDENATTLKIN
HEQLRCVLRAIDQVEAEAAAMGVGLTPSKASDIVAMRGVLEAGSVEDDPAPLTKHLLEEAKTLISAFNDMRRAEGAALEK
VLLSQLDEVAQLTSQAKEHAKTRSAEAGDILRRNLRRVLDNIETVDEDRLAQELAMIAVKSDVTEEVDRLAAHVTAARDL
IRQGGPVGRKLDFLMQEFNREANTLCAKAQNTELTRCGLALKAVIDQMREQVQNVE

Sequences:

>Translated_296_residues
MLRSMTGFASATGGLAPHAWNWELRSVNGKGQDLRLRVPDWIDGLEIGLRKMLAAQTARGTITLSLRLTRDENATTLKIN
HEQLRCVLRAIDQVEAEAAAMGVGLTPSKASDIVAMRGVLEAGSVEDDPAPLTKHLLEEAKTLISAFNDMRRAEGAALEK
VLLSQLDEVAQLTSQAKEHAKTRSAEAGDILRRNLRRVLDNIETVDEDRLAQELAMIAVKSDVTEEVDRLAAHVTAARDL
IRQGGPVGRKLDFLMQEFNREANTLCAKAQNTELTRCGLALKAVIDQMREQVQNVE
>Mature_296_residues
MLRSMTGFASATGGLAPHAWNWELRSVNGKGQDLRLRVPDWIDGLEIGLRKMLAAQTARGTITLSLRLTRDENATTLKIN
HEQLRCVLRAIDQVEAEAAAMGVGLTPSKASDIVAMRGVLEAGSVEDDPAPLTKHLLEEAKTLISAFNDMRRAEGAALEK
VLLSQLDEVAQLTSQAKEHAKTRSAEAGDILRRNLRRVLDNIETVDEDRLAQELAMIAVKSDVTEEVDRLAAHVTAARDL
IRQGGPVGRKLDFLMQEFNREANTLCAKAQNTELTRCGLALKAVIDQMREQVQNVE

Specific function: Unknown

COG id: COG1561

COG function: function code S; Uncharacterized stress-induced protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0701 family [H]

Homologues:

Organism=Escherichia coli, GI1790075, Length=301, Percent_Identity=31.8936877076412, Blast_Score=134, Evalue=1e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005229
- InterPro:   IPR013551
- InterPro:   IPR013527 [H]

Pfam domain/function: PF08340 DUF1732; PF03755 YicC_N [H]

EC number: NA

Molecular weight: Translated: 32521; Mature: 32521

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRSMTGFASATGGLAPHAWNWELRSVNGKGQDLRLRVPDWIDGLEIGLRKMLAAQTARG
CCCCCCCHHHCCCCCCCCCCCCEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCC
TITLSLRLTRDENATTLKINHEQLRCVLRAIDQVEAEAAAMGVGLTPSKASDIVAMRGVL
EEEEEEEEECCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
EAGSVEDDPAPLTKHLLEEAKTLISAFNDMRRAEGAALEKVLLSQLDEVAQLTSQAKEHA
HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KTRSAEAGDILRRNLRRVLDNIETVDEDRLAQELAMIAVKSDVTEEVDRLAAHVTAARDL
HHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRQGGPVGRKLDFLMQEFNREANTLCAKAQNTELTRCGLALKAVIDQMREQVQNVE
HHCCCCCCHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLRSMTGFASATGGLAPHAWNWELRSVNGKGQDLRLRVPDWIDGLEIGLRKMLAAQTARG
CCCCCCCHHHCCCCCCCCCCCCEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCC
TITLSLRLTRDENATTLKINHEQLRCVLRAIDQVEAEAAAMGVGLTPSKASDIVAMRGVL
EEEEEEEEECCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
EAGSVEDDPAPLTKHLLEEAKTLISAFNDMRRAEGAALEKVLLSQLDEVAQLTSQAKEHA
HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KTRSAEAGDILRRNLRRVLDNIETVDEDRLAQELAMIAVKSDVTEEVDRLAAHVTAARDL
HHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRQGGPVGRKLDFLMQEFNREANTLCAKAQNTELTRCGLALKAVIDQMREQVQNVE
HHCCCCCCHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]