Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is livK [C]

Identifier: 110679858

GI number: 110679858

Start: 2511596

End: 2512786

Strand: Reverse

Name: livK [C]

Synonym: RD1_2631

Alternate gene names: 110679858

Gene position: 2512786-2511596 (Counterclockwise)

Preceding gene: 110679861

Following gene: 110679857

Centisome position: 60.8

GC content: 59.7

Gene sequence:

>1191_bases
ATGAAAAAGTTGCTTATGGCCACAACGGCTGCAGCACTGATTGCCACCACTGCGCTGGCGGATGATACGAAAAGTGAAGT
AACGCTCGGGGTGCTCTTCGGGTTCACCGGTCCGATCGAATCGCTGACTGGCCCGATGGCCGCCGGTGCCGAACTTGCCA
TGGCGGAAGCGACCGAAAGCGGCAAATTTCTCGACTCTGCGACCGTGACATCAATCCGGGCTGACACCGGTTGCATCGAC
AACGGTCTGAGCACATCCAATGGCGAGCGGTTGATCGCGGAAGGCATCAACGGGTTGATCGGCGGGGATTGCTCCGGTGT
CACGGGTGCGATTTTGCAAAACGTGGCGATCCCGAACGGCATGGTGATGATTTCACCCTCGGCCACATCGCCGGGCCTGA
CCACGGTTGAAGACAACGACCTGTTTTTCCGCACCGCCCCGTCGGACGCGCGCGAAGGTCAGGTGATGGCTGAAATCCTG
CAGGAACGTGGGGTGAAATCCATCGCGCTGACCTATACCAACAACGACTACGGCAAAGGTCTCGCGGACGCGATCCAGAG
CAATTTCGAAAGCATCGGCGGGGAAGTCACGATCGTTGCCGCGCATGAAGACGGCAAGGCGGATTACTCCGCTGAAATGG
GCGCGCTGGCCTCGGCGGGTGGCGATATCCTCGTGGTTGCGGGCTATCTCGATCAAGGCGGCCTCGGTATCATCAACGCA
GCACTGGACACGGGCGCATTTGACACCTTCGGTCTGCCCGGCGGCATGATCGGCGACAGCCTGCCTGCCAATGTCGGCTC
TGCGCTGAACGGGTCCTACGGTCAGATCGCGGGGTCCGGTGGTGAAGGCATCGAAAAGCTCAAGGCGCTTTCGGGCGACG
CATTTGATGCCACATCGCCCTATACGCCCGAAAGCTATGATGCCGCCGCGCTTTTCATGCTGGCGATGCAGGCGGCGGAT
AGTGTCGATCCGGCGGACTATGGCAAGCACATTCTCGATGTGGCCAATGCACCGGGCGAAAAGATCTATCCCGGCGATCT
GGCCAAAGCCTTTGACATCCTGCGCGAAGGTGGCGAGATCGACTATGTCGGCGCGTCTGCGGTTGAATTGATCGGACCGG
GTGAGTCCGCCGGAACCTACCGCATGATCGAAGTACAGGACGGCGAAAACGTCACCATCGGCTTCAAGTAA

Upstream 100 bases:

>100_bases
TGCAGGAACGTCGGGCGATCCGGCCAAAACCGCTTTCAATTGGAAAATAGGGCGCATAATCTGCAAGGCGAACGCCAAGT
TCCAACATGGGAGATGAACA

Downstream 100 bases:

>100_bases
AAATCCGTTTGATATGAAAACAGCCCGGTGTCGCTGATGCCGGGCTGTTTTTGAACGCTGCAGGAAAGCTGGGAAGATGC
AAGGCACAGGCATGATCGTC

Product: branched-chain amino acid ABC transporter, periplasmic substrate-binding protein

Products: ADP; phosphate; L-leucine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 396; Mature: 396

Protein sequence:

>396_residues
MKKLLMATTAAALIATTALADDTKSEVTLGVLFGFTGPIESLTGPMAAGAELAMAEATESGKFLDSATVTSIRADTGCID
NGLSTSNGERLIAEGINGLIGGDCSGVTGAILQNVAIPNGMVMISPSATSPGLTTVEDNDLFFRTAPSDAREGQVMAEIL
QERGVKSIALTYTNNDYGKGLADAIQSNFESIGGEVTIVAAHEDGKADYSAEMGALASAGGDILVVAGYLDQGGLGIINA
ALDTGAFDTFGLPGGMIGDSLPANVGSALNGSYGQIAGSGGEGIEKLKALSGDAFDATSPYTPESYDAAALFMLAMQAAD
SVDPADYGKHILDVANAPGEKIYPGDLAKAFDILREGGEIDYVGASAVELIGPGESAGTYRMIEVQDGENVTIGFK

Sequences:

>Translated_396_residues
MKKLLMATTAAALIATTALADDTKSEVTLGVLFGFTGPIESLTGPMAAGAELAMAEATESGKFLDSATVTSIRADTGCID
NGLSTSNGERLIAEGINGLIGGDCSGVTGAILQNVAIPNGMVMISPSATSPGLTTVEDNDLFFRTAPSDAREGQVMAEIL
QERGVKSIALTYTNNDYGKGLADAIQSNFESIGGEVTIVAAHEDGKADYSAEMGALASAGGDILVVAGYLDQGGLGIINA
ALDTGAFDTFGLPGGMIGDSLPANVGSALNGSYGQIAGSGGEGIEKLKALSGDAFDATSPYTPESYDAAALFMLAMQAAD
SVDPADYGKHILDVANAPGEKIYPGDLAKAFDILREGGEIDYVGASAVELIGPGESAGTYRMIEVQDGENVTIGFK
>Mature_396_residues
MKKLLMATTAAALIATTALADDTKSEVTLGVLFGFTGPIESLTGPMAAGAELAMAEATESGKFLDSATVTSIRADTGCID
NGLSTSNGERLIAEGINGLIGGDCSGVTGAILQNVAIPNGMVMISPSATSPGLTTVEDNDLFFRTAPSDAREGQVMAEIL
QERGVKSIALTYTNNDYGKGLADAIQSNFESIGGEVTIVAAHEDGKADYSAEMGALASAGGDILVVAGYLDQGGLGIINA
ALDTGAFDTFGLPGGMIGDSLPANVGSALNGSYGQIAGSGGEGIEKLKALSGDAFDATSPYTPESYDAAALFMLAMQAAD
SVDPADYGKHILDVANAPGEKIYPGDLAKAFDILREGGEIDYVGASAVELIGPGESAGTYRMIEVQDGENVTIGFK

Specific function: Component of an amino-acid transport system (Potential) [H]

COG id: COG0683

COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the leucine-binding protein family [H]

Homologues:

Organism=Escherichia coli, GI1789867, Length=330, Percent_Identity=26.969696969697, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI48994941, Length=343, Percent_Identity=26.530612244898, Blast_Score=78, Evalue=8e-16,

Paralogues:

None

Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001828
- InterPro:   IPR000709 [H]

Pfam domain/function: PF01094 ANF_receptor [H]

EC number: NA

Molecular weight: Translated: 40139; Mature: 40139

Theoretical pI: Translated: 3.84; Mature: 3.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLLMATTAAALIATTALADDTKSEVTLGVLFGFTGPIESLTGPMAAGAELAMAEATES
CCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHCCCHHCCCHHHHHHHCCC
GKFLDSATVTSIRADTGCIDNGLSTSNGERLIAEGINGLIGGDCSGVTGAILQNVAIPNG
CCEECCHHHEEEECCCCCCCCCCCCCCCCEEHHHCCCCCCCCCCCCHHHHHHHHHCCCCC
MVMISPSATSPGLTTVEDNDLFFRTAPSDAREGQVMAEILQERGVKSIALTYTNNDYGKG
EEEEECCCCCCCCEEEECCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCH
LADAIQSNFESIGGEVTIVAAHEDGKADYSAEMGALASAGGDILVVAGYLDQGGLGIINA
HHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCCCEEEEE
ALDTGAFDTFGLPGGMIGDSLPANVGSALNGSYGQIAGSGGEGIEKLKALSGDAFDATSP
HHCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCEEECCCCHHHHHHHHHCCCCCCCCCC
YTPESYDAAALFMLAMQAADSVDPADYGKHILDVANAPGEKIYPGDLAKAFDILREGGEI
CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCE
DYVGASAVELIGPGESAGTYRMIEVQDGENVTIGFK
EEECCCEEEEECCCCCCCCEEEEEEECCCEEEEEEC
>Mature Secondary Structure
MKKLLMATTAAALIATTALADDTKSEVTLGVLFGFTGPIESLTGPMAAGAELAMAEATES
CCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHCCCHHCCCHHHHHHHCCC
GKFLDSATVTSIRADTGCIDNGLSTSNGERLIAEGINGLIGGDCSGVTGAILQNVAIPNG
CCEECCHHHEEEECCCCCCCCCCCCCCCCEEHHHCCCCCCCCCCCCHHHHHHHHHCCCCC
MVMISPSATSPGLTTVEDNDLFFRTAPSDAREGQVMAEILQERGVKSIALTYTNNDYGKG
EEEEECCCCCCCCEEEECCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCH
LADAIQSNFESIGGEVTIVAAHEDGKADYSAEMGALASAGGDILVVAGYLDQGGLGIINA
HHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCCCEEEEE
ALDTGAFDTFGLPGGMIGDSLPANVGSALNGSYGQIAGSGGEGIEKLKALSGDAFDATSP
HHCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCEEECCCCHHHHHHHHHCCCCCCCCCC
YTPESYDAAALFMLAMQAADSVDPADYGKHILDVANAPGEKIYPGDLAKAFDILREGGEI
CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCE
DYVGASAVELIGPGESAGTYRMIEVQDGENVTIGFK
EEECCCEEEEECCCCCCCCEEEEEEECCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-leucine [Periplasm]; H2O [C]

Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11756688 [H]