Click here to switch to the map view.

The map label for this gene is 110679778

Identifier: 110679778

GI number: 110679778

Start: 2431977

End: 2432786

Strand: Reverse

Name: 110679778

Synonym: RD1_2542

Alternate gene names: NA

Gene position: 2432786-2431977 (Counterclockwise)

Preceding gene: 110679788

Following gene: 110679777

Centisome position: 58.86

GC content: 61.98

Gene sequence:

>810_bases
ATGCGCGCCGGCTTGCGTGGTCTGAAAAAGCCGCCTGCGCCGCGCAAAGGCAGCCTGTGCCGCCGCCTATCCCCGTGGCG
CGCTTACCTGCGCGTGATCTTTGCCGTTTTCGCGTTCTGTCTGTCTGCCACCCTGCCGGGTTTCGCGGGGCCGTTGCCGA
TGCTGGACGCGGATCAACGCCTGCAATGGCAGGCCGTCGGGCGCGTAAACGGCGCAGGATTTCGCGCCACAAGCGGCTGT
TCGGGCACGCTGATTGCCCCCGATTTGGTGTTGACTGCGGCGCATTGTGTCACCTCAACCGGGTCCATGTGGTCGGAGCG
CCATTTTCTGGCCGGATGGTTTCGCGGTGACTTTGCGGCACACCGTGTCTCTGCGGACATTCAGGTACATCCGCTGTATG
AGCTGAGCGAAGGGGCGGCCAAATTTGCCTATGACATCGCCTTGATCCAATTGGAAACACCGATCGAGCGCAGGCTGGTT
CCCCCCGTTGATCTGATCGCACAGCATGAAGAGGCCGGTCCGACCGGCATGTTGCTTGGCTATCAAAACACCCGCCCCCA
TGCGTTGAGCGGGGCACGGGGATGCCCCCGCAAACAACTGCGTCAGACGAAATGGGTGATTTACGGATGCGAGGTGGTCA
GCGGCACATCAGGCGGGGCGGTGATGGTCGAAACCCAGACCGGATGGCGTCTTGCCGCCGTCATCGTCGCGCGTCAGGGA
GCAGAGGGCGAAGCGCTTGCCGTTCCGGTCAACGATTGGATGCGCGATGCCGTGAAAGAAGCGCAAAAACGGGTGGATTT
GCGCAAATAA

Upstream 100 bases:

>100_bases
GATGGCGTACCACGTCACTTCCGCGACACGCGAATTTTGGCGGAACCTATGGTCTGATGCCGCGCTTTGCAAGGCAGACC
GTAGGGGGATTGCAAATGAA

Downstream 100 bases:

>100_bases
CAGCCCCCGACGGGCCACGCGGCGCTTACGATCCATTCAACTTTCGGTCATAAGCAGAGCCAGAAACGAGTCAGACCCAA
GGACCAGACATGCACGATAT

Product: trypsin domain-containing protein

Products: NA

Alternate protein names: Trypsin Domain Protein; Trypsin Domain-Containing Protein; Trypsin; Protease; S1/S6 Family Peptidase

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MRAGLRGLKKPPAPRKGSLCRRLSPWRAYLRVIFAVFAFCLSATLPGFAGPLPMLDADQRLQWQAVGRVNGAGFRATSGC
SGTLIAPDLVLTAAHCVTSTGSMWSERHFLAGWFRGDFAAHRVSADIQVHPLYELSEGAAKFAYDIALIQLETPIERRLV
PPVDLIAQHEEAGPTGMLLGYQNTRPHALSGARGCPRKQLRQTKWVIYGCEVVSGTSGGAVMVETQTGWRLAAVIVARQG
AEGEALAVPVNDWMRDAVKEAQKRVDLRK

Sequences:

>Translated_269_residues
MRAGLRGLKKPPAPRKGSLCRRLSPWRAYLRVIFAVFAFCLSATLPGFAGPLPMLDADQRLQWQAVGRVNGAGFRATSGC
SGTLIAPDLVLTAAHCVTSTGSMWSERHFLAGWFRGDFAAHRVSADIQVHPLYELSEGAAKFAYDIALIQLETPIERRLV
PPVDLIAQHEEAGPTGMLLGYQNTRPHALSGARGCPRKQLRQTKWVIYGCEVVSGTSGGAVMVETQTGWRLAAVIVARQG
AEGEALAVPVNDWMRDAVKEAQKRVDLRK
>Mature_269_residues
MRAGLRGLKKPPAPRKGSLCRRLSPWRAYLRVIFAVFAFCLSATLPGFAGPLPMLDADQRLQWQAVGRVNGAGFRATSGC
SGTLIAPDLVLTAAHCVTSTGSMWSERHFLAGWFRGDFAAHRVSADIQVHPLYELSEGAAKFAYDIALIQLETPIERRLV
PPVDLIAQHEEAGPTGMLLGYQNTRPHALSGARGCPRKQLRQTKWVIYGCEVVSGTSGGAVMVETQTGWRLAAVIVARQG
AEGEALAVPVNDWMRDAVKEAQKRVDLRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29300; Mature: 29300

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: PS00134 TRYPSIN_HIS ; PS50240 TRYPSIN_DOM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAGLRGLKKPPAPRKGSLCRRLSPWRAYLRVIFAVFAFCLSATLPGFAGPLPMLDADQR
CCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
LQWQAVGRVNGAGFRATSGCSGTLIAPDLVLTAAHCVTSTGSMWSERHFLAGWFRGDFAA
EEEEECCCCCCCCCEECCCCCCCEECHHHHHHHHHHHHCCCCHHHCCHHHHHHHHCCHHH
HRVSADIQVHPLYELSEGAAKFAYDIALIQLETPIERRLVPPVDLIAQHEEAGPTGMLLG
HEECCCEEEEECHHHHCCHHHHEEEEEEEEECCCHHHHCCCCHHHHHCCCCCCCCEEEEE
YQNTRPHALSGARGCPRKQLRQTKWVIYGCEVVSGTSGGAVMVETQTGWRLAAVIVARQG
CCCCCCCCCCCCCCCCHHHHHCCCEEEEEEEEEECCCCCEEEEEECCCCEEEEEEEECCC
AEGEALAVPVNDWMRDAVKEAQKRVDLRK
CCCCEEEEEHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRAGLRGLKKPPAPRKGSLCRRLSPWRAYLRVIFAVFAFCLSATLPGFAGPLPMLDADQR
CCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
LQWQAVGRVNGAGFRATSGCSGTLIAPDLVLTAAHCVTSTGSMWSERHFLAGWFRGDFAA
EEEEECCCCCCCCCEECCCCCCCEECHHHHHHHHHHHHCCCCHHHCCHHHHHHHHCCHHH
HRVSADIQVHPLYELSEGAAKFAYDIALIQLETPIERRLVPPVDLIAQHEEAGPTGMLLG
HEECCCEEEEECHHHHCCHHHHEEEEEEEEECCCHHHHCCCCHHHHHCCCCCCCCEEEEE
YQNTRPHALSGARGCPRKQLRQTKWVIYGCEVVSGTSGGAVMVETQTGWRLAAVIVARQG
CCCCCCCCCCCCCCCCHHHHHCCCEEEEEEEEEECCCCCEEEEEECCCCEEEEEEEECCC
AEGEALAVPVNDWMRDAVKEAQKRVDLRK
CCCCEEEEEHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA