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The map label for this gene is sbp

Identifier: 110679627

GI number: 110679627

Start: 2267077

End: 2268441

Strand: Reverse

Name: sbp

Synonym: RD1_2378

Alternate gene names: NA

Gene position: 2268441-2267077 (Counterclockwise)

Preceding gene: 110679628

Following gene: 110679626

Centisome position: 54.88

GC content: 56.26

Gene sequence:

>1365_bases
ATGACAGAGACAAACGGAAGCTGCTGCGCAGGCCCGGGCTATGCATCACCAGAGGAAGCCATCAAGGCGCCGCGCGAAAA
GGTCGTCTATACGATCTGCATTTACACCGGCACGGGGATCGAGAAACCCGACTACCTTGCCACCATCGATGTGGATGAAG
ACAGCCCGACCTACGGCGAGGTCATTCACCGCACGGAAATGCCCGTGATCGGAGATGAGCTTCACCACATGGGTTGGAAC
GCCTGTTCTTCCTGCAACACCGACGGCAGCATGGAGCGGAAATATCTGATCATACCGGGCGTGCGCACGACGAATTTCTA
CATCGTCGATACCGCAACCGACCCGCGCAAACCGACGCTGTTCAAGACGATTGATGGCGAGGAGATCAAGGCCAAGACCA
ACCTGTCCGCGCCCCACACGGTGCATTGTCTTGGTGCCGATATCATCGTGTCGATGCTGGGCGATGCCGATGGCAACGGA
CCGGGTGGCTTCCTGCATCTGGACAAGGAATTCAATATCATCGGGCGTTGGGAAAACGATCTGGGTGACATGAAATACAA
CTATGATTTCTGGTATCAACCACGCCACAACATGATGATTTCGACGGAATGGGGCTCACCCAACACTTTCATGCCGGGGT
TTGATCTTGAGGATGTGGCCCGTGGCAAATACGGCCAGCACGTCCATTTCTGGGATTTCGAGAACCGCAAGGTCGAGCAG
AGCATTGATCTGGGGCCCGAAGGCATGATCCCGTTGGAGGCGCGGTTTCACCACAATCCCGACAGCACCCATGGTTTTGT
CGGCGCGGCGCTGGCCTCGAATATTTTCCACTACCACAAGGACAACGGCAAGATCGAGATCAACAAGATCATCGACGTGC
CCACCGTGGATGTCGAAGGTTTCCCCGTCCCGATGCCCAGCCTGATCACCGATATTCTGGTGTCGATGGATGACAAATAC
CTCTACTTCTCCAACTGGCTGCACGGCGATCTGAGGCAATATGACATCTCTGATCCGGCCAATCCGAAACTCACCGGCCA
GGTCTGGATCGGCGGGCTTTTGGGCAAGGCTCCCGAGGTGAACGGTCGCACCGTGGATGGCGCGCCGCAGATGATCCAGC
TGTCGCTGGATGGCAAGCGGCTCTATGTCACCACCTCGCTGTTCTCGACATGGGACAACCAGTTCTACCCCTCCATGAAA
GACAAGGGCGGGATCATGCTGATTGTGGATTGCGACAATGAAAATGGCGGCATGACGATCCGCGACAACTTCATCGTTGA
TTTCAACAACGAGCCGCACGGCCCTGCCCGCGCGCATGAAACGCGCTATCCCGGCGGTGATTGCTCATCCGACATCTGGA
TTTGA

Upstream 100 bases:

>100_bases
TTGCGCTGTGTCTCAGGACCGGATTGCAGACATGCCAAGACCAACAGAACCACAACAGAAGGCAAAACAACTGCCAAACC
ACCACTAAGGGAGCGAGACC

Downstream 100 bases:

>100_bases
ACAATCGGTAACACCTGCCCCGGCCCGGGATTTCGGGCCGGGGTCACAGTGGGGGGCGCATGCGAAAACACAAGGTGACA
TTGCGAAACCGCGATAACCT

Product: selenium binding protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 454; Mature: 453

Protein sequence:

>454_residues
MTETNGSCCAGPGYASPEEAIKAPREKVVYTICIYTGTGIEKPDYLATIDVDEDSPTYGEVIHRTEMPVIGDELHHMGWN
ACSSCNTDGSMERKYLIIPGVRTTNFYIVDTATDPRKPTLFKTIDGEEIKAKTNLSAPHTVHCLGADIIVSMLGDADGNG
PGGFLHLDKEFNIIGRWENDLGDMKYNYDFWYQPRHNMMISTEWGSPNTFMPGFDLEDVARGKYGQHVHFWDFENRKVEQ
SIDLGPEGMIPLEARFHHNPDSTHGFVGAALASNIFHYHKDNGKIEINKIIDVPTVDVEGFPVPMPSLITDILVSMDDKY
LYFSNWLHGDLRQYDISDPANPKLTGQVWIGGLLGKAPEVNGRTVDGAPQMIQLSLDGKRLYVTTSLFSTWDNQFYPSMK
DKGGIMLIVDCDNENGGMTIRDNFIVDFNNEPHGPARAHETRYPGGDCSSDIWI

Sequences:

>Translated_454_residues
MTETNGSCCAGPGYASPEEAIKAPREKVVYTICIYTGTGIEKPDYLATIDVDEDSPTYGEVIHRTEMPVIGDELHHMGWN
ACSSCNTDGSMERKYLIIPGVRTTNFYIVDTATDPRKPTLFKTIDGEEIKAKTNLSAPHTVHCLGADIIVSMLGDADGNG
PGGFLHLDKEFNIIGRWENDLGDMKYNYDFWYQPRHNMMISTEWGSPNTFMPGFDLEDVARGKYGQHVHFWDFENRKVEQ
SIDLGPEGMIPLEARFHHNPDSTHGFVGAALASNIFHYHKDNGKIEINKIIDVPTVDVEGFPVPMPSLITDILVSMDDKY
LYFSNWLHGDLRQYDISDPANPKLTGQVWIGGLLGKAPEVNGRTVDGAPQMIQLSLDGKRLYVTTSLFSTWDNQFYPSMK
DKGGIMLIVDCDNENGGMTIRDNFIVDFNNEPHGPARAHETRYPGGDCSSDIWI
>Mature_453_residues
TETNGSCCAGPGYASPEEAIKAPREKVVYTICIYTGTGIEKPDYLATIDVDEDSPTYGEVIHRTEMPVIGDELHHMGWNA
CSSCNTDGSMERKYLIIPGVRTTNFYIVDTATDPRKPTLFKTIDGEEIKAKTNLSAPHTVHCLGADIIVSMLGDADGNGP
GGFLHLDKEFNIIGRWENDLGDMKYNYDFWYQPRHNMMISTEWGSPNTFMPGFDLEDVARGKYGQHVHFWDFENRKVEQS
IDLGPEGMIPLEARFHHNPDSTHGFVGAALASNIFHYHKDNGKIEINKIIDVPTVDVEGFPVPMPSLITDILVSMDDKYL
YFSNWLHGDLRQYDISDPANPKLTGQVWIGGLLGKAPEVNGRTVDGAPQMIQLSLDGKRLYVTTSLFSTWDNQFYPSMKD
KGGIMLIVDCDNENGGMTIRDNFIVDFNNEPHGPARAHETRYPGGDCSSDIWI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI16306550, Length=475, Percent_Identity=53.2631578947368, Blast_Score=514, Evalue=1e-146,
Organism=Caenorhabditis elegans, GI17543050, Length=468, Percent_Identity=48.9316239316239, Blast_Score=429, Evalue=1e-120,
Organism=Caenorhabditis elegans, GI17563122, Length=436, Percent_Identity=32.7981651376147, Blast_Score=219, Evalue=2e-57,
Organism=Caenorhabditis elegans, GI17540410, Length=107, Percent_Identity=59.8130841121495, Blast_Score=128, Evalue=8e-30,
Organism=Drosophila melanogaster, GI24646469, Length=484, Percent_Identity=46.2809917355372, Blast_Score=457, Evalue=1e-129,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50714; Mature: 50583

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTETNGSCCAGPGYASPEEAIKAPREKVVYTICIYTGTGIEKPDYLATIDVDEDSPTYGE
CCCCCCCEECCCCCCCHHHHHHCCCCEEEEEEEEEECCCCCCCCEEEEEECCCCCCCHHH
VIHRTEMPVIGDELHHMGWNACSSCNTDGSMERKYLIIPGVRTTNFYIVDTATDPRKPTL
HHHHCCCCCCCHHHHHCCCCHHCCCCCCCCCCEEEEEECCCEECEEEEEECCCCCCCCCE
FKTIDGEEIKAKTNLSAPHTVHCLGADIIVSMLGDADGNGPGGFLHLDKEFNIIGRWEND
EEECCCCEEEEECCCCCCCEEEEECHHHHHHHHCCCCCCCCCCEEEECCCEEEEEECCCC
LGDMKYNYDFWYQPRHNMMISTEWGSPNTFMPGFDLEDVARGKYGQHVHFWDFENRKVEQ
CCCEEECCEEEECCCCCEEEEECCCCCCCCCCCCCHHHHHCCCCCCEEEEEECCCCEEHH
SIDLGPEGMIPLEARFHHNPDSTHGFVGAALASNIFHYHKDNGKIEINKIIDVPTVDVEG
HCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHEEEECCCCEEEEEEEEECCEECCCC
FPVPMPSLITDILVSMDDKYLYFSNWLHGDLRQYDISDPANPKLTGQVWIGGLLGKAPEV
CCCCHHHHHHHHHHHCCCCEEEEECCCCCCCEEECCCCCCCCCEEEEEEEEEHHCCCCCC
NGRTVDGAPQMIQLSLDGKRLYVTTSLFSTWDNQFYPSMKDKGGIMLIVDCDNENGGMTI
CCEEECCCCCEEEEEECCCEEEEEEHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCEEE
RDNFIVDFNNEPHGPARAHETRYPGGDCSSDIWI
ECCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TETNGSCCAGPGYASPEEAIKAPREKVVYTICIYTGTGIEKPDYLATIDVDEDSPTYGE
CCCCCCEECCCCCCCHHHHHHCCCCEEEEEEEEEECCCCCCCCEEEEEECCCCCCCHHH
VIHRTEMPVIGDELHHMGWNACSSCNTDGSMERKYLIIPGVRTTNFYIVDTATDPRKPTL
HHHHCCCCCCCHHHHHCCCCHHCCCCCCCCCCEEEEEECCCEECEEEEEECCCCCCCCCE
FKTIDGEEIKAKTNLSAPHTVHCLGADIIVSMLGDADGNGPGGFLHLDKEFNIIGRWEND
EEECCCCEEEEECCCCCCCEEEEECHHHHHHHHCCCCCCCCCCEEEECCCEEEEEECCCC
LGDMKYNYDFWYQPRHNMMISTEWGSPNTFMPGFDLEDVARGKYGQHVHFWDFENRKVEQ
CCCEEECCEEEECCCCCEEEEECCCCCCCCCCCCCHHHHHCCCCCCEEEEEECCCCEEHH
SIDLGPEGMIPLEARFHHNPDSTHGFVGAALASNIFHYHKDNGKIEINKIIDVPTVDVEG
HCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHEEEECCCCEEEEEEEEECCEECCCC
FPVPMPSLITDILVSMDDKYLYFSNWLHGDLRQYDISDPANPKLTGQVWIGGLLGKAPEV
CCCCHHHHHHHHHHHCCCCEEEEECCCCCCCEEECCCCCCCCCEEEEEEEEEHHCCCCCC
NGRTVDGAPQMIQLSLDGKRLYVTTSLFSTWDNQFYPSMKDKGGIMLIVDCDNENGGMTI
CCEEECCCCCEEEEEECCCEEEEEEHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCEEE
RDNFIVDFNNEPHGPARAHETRYPGGDCSSDIWI
ECCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA