Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is 110679602

Identifier: 110679602

GI number: 110679602

Start: 2246132

End: 2246716

Strand: Reverse

Name: 110679602

Synonym: RD1_2347

Alternate gene names: NA

Gene position: 2246716-2246132 (Counterclockwise)

Preceding gene: 110679603

Following gene: 110679601

Centisome position: 54.36

GC content: 61.2

Gene sequence:

>585_bases
GTGCCGATTGCTTTATTTGCATTCACGGCTGGCATCGCCCTGCGTGGCATTCTGGTTCACTACCCGCACCGCGCGCTTGG
AATGGGCAATGGCGTCACGTTGATACGCGCCGCACTGGTTGCGGTGCTTGCCGGGGCGGTCATGGCCCCGCACCCCGCAG
GCTGGGTCGTGTTTGCGCTCGCCTGCGTGGCCTTTGCGCTGGATGGTCTGGACGGATGGCTTGCCCGCCGGTCCGGCCTT
ACGTCTGCTTTCGGCGCGCGTTTTGACATGGAGATTGACGCGCTGCTCGCCGCCGTTCTGGCACTCATTCTGCTGAGCGA
CGGTCACGTTGGCCTCGAAATCCTGTTCCTGGGCTTCACCCGTTATGCATTTGTCATCGCAAGCCTGTTTTTGGACCGAC
TGCGCAGACCCCTGCCCGACAGCCTGCGACGCAAGACCATATGTGTTATACAAATTGCAGCGCTGATCGCATTGCTGTGC
CCGCTGACGCCTCTGTGGCTGATGCCACCACTGTCGTGGGGCGCTGCGGTATTGCTGCTGTGCTCCTTTGCAACAGACAT
ACGTTGGTTGCTGGGCCGTCCTTGA

Upstream 100 bases:

>100_bases
CCGCATCGCGCCGGGTCCGCAGTCGCTGTTCGCGGTGCTGAGTCTTGCGCTGTTGGGGCCCGTTTCATTTGCTGCGCTGG
CGATCTTTGGCAATCTCGCT

Downstream 100 bases:

>100_bases
TGATAAAGATCATAAGCCTCGCACTTGCCGGTTTCACAGTTTTTCTGGCGCTCGTTCTGCCCAATCATCCGGGCACGATG
TCGCTTTCGGCCCTCAACCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 193

Protein sequence:

>194_residues
MPIALFAFTAGIALRGILVHYPHRALGMGNGVTLIRAALVAVLAGAVMAPHPAGWVVFALACVAFALDGLDGWLARRSGL
TSAFGARFDMEIDALLAAVLALILLSDGHVGLEILFLGFTRYAFVIASLFLDRLRRPLPDSLRRKTICVIQIAALIALLC
PLTPLWLMPPLSWGAAVLLLCSFATDIRWLLGRP

Sequences:

>Translated_194_residues
MPIALFAFTAGIALRGILVHYPHRALGMGNGVTLIRAALVAVLAGAVMAPHPAGWVVFALACVAFALDGLDGWLARRSGL
TSAFGARFDMEIDALLAAVLALILLSDGHVGLEILFLGFTRYAFVIASLFLDRLRRPLPDSLRRKTICVIQIAALIALLC
PLTPLWLMPPLSWGAAVLLLCSFATDIRWLLGRP
>Mature_193_residues
PIALFAFTAGIALRGILVHYPHRALGMGNGVTLIRAALVAVLAGAVMAPHPAGWVVFALACVAFALDGLDGWLARRSGLT
SAFGARFDMEIDALLAAVLALILLSDGHVGLEILFLGFTRYAFVIASLFLDRLRRPLPDSLRRKTICVIQIAALIALLCP
LTPLWLMPPLSWGAAVLLLCSFATDIRWLLGRP

Specific function: Unknown

COG id: COG0558

COG function: function code I; Phosphatidylglycerophosphate synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20809; Mature: 20678

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIALFAFTAGIALRGILVHYPHRALGMGNGVTLIRAALVAVLAGAVMAPHPAGWVVFAL
CCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
ACVAFALDGLDGWLARRSGLTSAFGARFDMEIDALLAAVLALILLSDGHVGLEILFLGFT
HHHHHHHHCHHHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
RYAFVIASLFLDRLRRPLPDSLRRKTICVIQIAALIALLCPLTPLWLMPPLSWGAAVLLL
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHH
CSFATDIRWLLGRP
HHHHHHHHHHHCCC
>Mature Secondary Structure 
PIALFAFTAGIALRGILVHYPHRALGMGNGVTLIRAALVAVLAGAVMAPHPAGWVVFAL
CCHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
ACVAFALDGLDGWLARRSGLTSAFGARFDMEIDALLAAVLALILLSDGHVGLEILFLGFT
HHHHHHHHCHHHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
RYAFVIASLFLDRLRRPLPDSLRRKTICVIQIAALIALLCPLTPLWLMPPLSWGAAVLLL
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHH
CSFATDIRWLLGRP
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA