Click here to switch to the map view.

The map label for this gene is 110679561

Identifier: 110679561

GI number: 110679561

Start: 2198082

End: 2198546

Strand: Reverse

Name: 110679561

Synonym: RD1_2302

Alternate gene names: NA

Gene position: 2198546-2198082 (Counterclockwise)

Preceding gene: 110679562

Following gene: 110679552

Centisome position: 53.19

GC content: 63.66

Gene sequence:

>465_bases
ATGACGCGATGGCTCTTGCCTGCCGGGGTGGCAGGGGGGCTCGTGGCGCTCACCAGTATGGCTTTGGCGCCGGGGTCAGA
TCTGCGCGTCACAGGGGTCACACCCGACCTTGCCCGCGGTGAAGCGATTTATGCCGAGGCCTGTGCGGCCTGCCATGGCG
CCAACCTGCAGGGAGAGCCGGATTGGCGCACGCCCGGACCCGATGGCAGGCTGCCAGCGCCCCCGCATGATGCCACGGGC
CATACCTGGCATCACCCCGACCGCCTGCTTCTGGACATCACCCTGCATTGCACCGCAGCCGTTGTGGGCGGCGGCTACGA
AAGCAACATGCCGGGTTTCGCTGGGGATTACTCCGAAGACGCACTGAAAGACGTGCTGGCATGGATCAAAACGCAATGGC
CCGAAGAACAACGCATATATCAGGCAAATGCCACCGCACGAGATGAGCAGAACCGTGCCAATTAG

Upstream 100 bases:

>100_bases
TGCTCGCAAACGCACTGCGTCTGCGCAGTTGGACACCGGAACCCATCGGCCAGAGCGCGCGTGAAAACGCATCGGTGGAC
CTGCATCCGGTGCCTGTGAA

Downstream 100 bases:

>100_bases
AGCGCCTGACGAAGTACCTGAAACATCGAGTATCACGTAACGCGTTGAAGTCTGTGATTTCCGGCAACGTTACGTGATCG
AGGTTTTTCGCACGACGCGT

Product: cytochrome c family protein, putative

Products: NA

Alternate protein names: Cytochrome C; Cytochrome C Family Protein; Cytochrome C Subfamily; Cytochrome; CopJ Protein; Cytochrome C Class ICCytochrome C Class I

Number of amino acids: Translated: 154; Mature: 153

Protein sequence:

>154_residues
MTRWLLPAGVAGGLVALTSMALAPGSDLRVTGVTPDLARGEAIYAEACAACHGANLQGEPDWRTPGPDGRLPAPPHDATG
HTWHHPDRLLLDITLHCTAAVVGGGYESNMPGFAGDYSEDALKDVLAWIKTQWPEEQRIYQANATARDEQNRAN

Sequences:

>Translated_154_residues
MTRWLLPAGVAGGLVALTSMALAPGSDLRVTGVTPDLARGEAIYAEACAACHGANLQGEPDWRTPGPDGRLPAPPHDATG
HTWHHPDRLLLDITLHCTAAVVGGGYESNMPGFAGDYSEDALKDVLAWIKTQWPEEQRIYQANATARDEQNRAN
>Mature_153_residues
TRWLLPAGVAGGLVALTSMALAPGSDLRVTGVTPDLARGEAIYAEACAACHGANLQGEPDWRTPGPDGRLPAPPHDATGH
TWHHPDRLLLDITLHCTAAVVGGGYESNMPGFAGDYSEDALKDVLAWIKTQWPEEQRIYQANATARDEQNRAN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16464; Mature: 16333

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRWLLPAGVAGGLVALTSMALAPGSDLRVTGVTPDLARGEAIYAEACAACHGANLQGEP
CCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCC
DWRTPGPDGRLPAPPHDATGHTWHHPDRLLLDITLHCTAAVVGGGYESNMPGFAGDYSED
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEHEEHEECCCCCCCCCCCCCCCCHH
ALKDVLAWIKTQWPEEQRIYQANATARDEQNRAN
HHHHHHHHHHCCCCCHHHEEECCCCCCCCCCCCC
>Mature Secondary Structure 
TRWLLPAGVAGGLVALTSMALAPGSDLRVTGVTPDLARGEAIYAEACAACHGANLQGEP
CCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCC
DWRTPGPDGRLPAPPHDATGHTWHHPDRLLLDITLHCTAAVVGGGYESNMPGFAGDYSED
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEHEEHEECCCCCCCCCCCCCCCCHH
ALKDVLAWIKTQWPEEQRIYQANATARDEQNRAN
HHHHHHHHHHCCCCCHHHEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA