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The map label for this gene is dppC [H]

Identifier: 110679494

GI number: 110679494

Start: 2124532

End: 2125476

Strand: Reverse

Name: dppC [H]

Synonym: RD1_2223

Alternate gene names: 110679494

Gene position: 2125476-2124532 (Counterclockwise)

Preceding gene: 110679495

Following gene: 110679493

Centisome position: 51.43

GC content: 60.95

Gene sequence:

>945_bases
ATGACGGATTTGCCAGTAAAGGCGGCAGAGCAATCGCGCTTGCGGGTTTTTCTCGACAGCGACGTTTTCTACATGTTCAG
GAAATCGCCTGTCGCCGTGGTCTCTTCAATCGTATTCGGGCTCCTTGTGCTCTCGGCTGTCTTTGCACCGCTGATTGCCC
CGACCAACCCGTTTGATCCGTCATCCCTCAACCTGATGAATGGTTTCACCGCGCCGATGACCCCGAACGCCTTCACCGGG
GAGAGCTTTTTACTGGGCACCGATGATCAGGGGCGGGATGTGTTTTCGACCATCCTTTACGGGATGCGCGTGTCGCTTTT
TGTCGGGGTGTCCGCCGTACTGCTCGCGATGGTGCTGGGCATCACGCTGGGGTTGATATCGGGATATGTGGGTGGGTGGA
CGGAAACCATCATCATGCGCACGGCGGATGTGCAGCTGACCTTCCCCTCCATCCTCGTGGCCATGCTGATTTTCGGGATC
GCCAAGGGGATCACGCCGGTCGAATACCGCGACCAGATGGCCATATGGGTGCTGATCCTCGCCATTGGGCTGGGGGAGTG
GGTGCAGTTTGCCCGCGTCGTGCGCGGAGCTACGATGGTCGAAAAGCGCAAGGAATACGTTGAGGCGGCGCGCCTGATTG
GGCGCACGCCCTTTGCCATCATGCTGCGGCACATCCTGCCCAATGTGCTCTCGCCCGTTCTGGTGATCGCCACGATCACG
CTGGCGCTAGCGATCATCGCCGAGGCCACGCTGAGCTTTCTGGGCGTCGGCGCGCCGCCCACCCAACCCTCGCTGGGCAC
CTTGATCCGCATCGGGCAAGGGTTCCTCTTCTCGGGCGAGTGGTGGATTTTGCTGTTCCCGGCGATCACGCTTCTGGCAC
TCGCGCTCAGTGTCAATCTGCTGGGCGACTGGCTGCGCGATGCGCTCAACCCGAGGCTGCGCTGA

Upstream 100 bases:

>100_bases
TGCTGATTTCGGTCATGTTCGTGGCCATCAACCTGATCGTGGATATCCTTTATTTCTTTATCGACCCGCGCCTGCGGGTT
GACCGTGCGGGAGGGCACTG

Downstream 100 bases:

>100_bases
TGTCGGATGCTGTCTTGTCAATCCGCGGGCTGTCGGTCGAAATCCCCAACCGCAGCGGCACGGTCAAACCGGTGGACGGT
GTCAGCTATGACATCCGTGC

Product: peptide ABC transporter, permease protein, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 313

Protein sequence:

>314_residues
MTDLPVKAAEQSRLRVFLDSDVFYMFRKSPVAVVSSIVFGLLVLSAVFAPLIAPTNPFDPSSLNLMNGFTAPMTPNAFTG
ESFLLGTDDQGRDVFSTILYGMRVSLFVGVSAVLLAMVLGITLGLISGYVGGWTETIIMRTADVQLTFPSILVAMLIFGI
AKGITPVEYRDQMAIWVLILAIGLGEWVQFARVVRGATMVEKRKEYVEAARLIGRTPFAIMLRHILPNVLSPVLVIATIT
LALAIIAEATLSFLGVGAPPTQPSLGTLIRIGQGFLFSGEWWILLFPAITLLALALSVNLLGDWLRDALNPRLR

Sequences:

>Translated_314_residues
MTDLPVKAAEQSRLRVFLDSDVFYMFRKSPVAVVSSIVFGLLVLSAVFAPLIAPTNPFDPSSLNLMNGFTAPMTPNAFTG
ESFLLGTDDQGRDVFSTILYGMRVSLFVGVSAVLLAMVLGITLGLISGYVGGWTETIIMRTADVQLTFPSILVAMLIFGI
AKGITPVEYRDQMAIWVLILAIGLGEWVQFARVVRGATMVEKRKEYVEAARLIGRTPFAIMLRHILPNVLSPVLVIATIT
LALAIIAEATLSFLGVGAPPTQPSLGTLIRIGQGFLFSGEWWILLFPAITLLALALSVNLLGDWLRDALNPRLR
>Mature_313_residues
TDLPVKAAEQSRLRVFLDSDVFYMFRKSPVAVVSSIVFGLLVLSAVFAPLIAPTNPFDPSSLNLMNGFTAPMTPNAFTGE
SFLLGTDDQGRDVFSTILYGMRVSLFVGVSAVLLAMVLGITLGLISGYVGGWTETIIMRTADVQLTFPSILVAMLIFGIA
KGITPVEYRDQMAIWVLILAIGLGEWVQFARVVRGATMVEKRKEYVEAARLIGRTPFAIMLRHILPNVLSPVLVIATITL
ALAIIAEATLSFLGVGAPPTQPSLGTLIRIGQGFLFSGEWWILLFPAITLLALALSVNLLGDWLRDALNPRLR

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=293, Percent_Identity=37.2013651877133, Blast_Score=172, Evalue=3e-44,
Organism=Escherichia coli, GI1787760, Length=307, Percent_Identity=30.9446254071661, Blast_Score=155, Evalue=3e-39,
Organism=Escherichia coli, GI1789964, Length=298, Percent_Identity=35.5704697986577, Blast_Score=147, Evalue=8e-37,
Organism=Escherichia coli, GI1787498, Length=295, Percent_Identity=35.9322033898305, Blast_Score=127, Evalue=1e-30,
Organism=Escherichia coli, GI1789889, Length=258, Percent_Identity=30.6201550387597, Blast_Score=114, Evalue=1e-26,
Organism=Escherichia coli, GI1788505, Length=255, Percent_Identity=29.8039215686275, Blast_Score=99, Evalue=5e-22,
Organism=Escherichia coli, GI1787549, Length=228, Percent_Identity=30.7017543859649, Blast_Score=94, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34083; Mature: 33952

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDLPVKAAEQSRLRVFLDSDVFYMFRKSPVAVVSSIVFGLLVLSAVFAPLIAPTNPFDP
CCCCCCCHHCCCCEEEEECCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
SSLNLMNGFTAPMTPNAFTGESFLLGTDDQGRDVFSTILYGMRVSLFVGVSAVLLAMVLG
CCCHHHCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ITLGLISGYVGGWTETIIMRTADVQLTFPSILVAMLIFGIAKGITPVEYRDQMAIWVLIL
HHHHHHHHHCCCHHHHHHEEECCCEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
AIGLGEWVQFARVVRGATMVEKRKEYVEAARLIGRTPFAIMLRHILPNVLSPVLVIATIT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LALAIIAEATLSFLGVGAPPTQPSLGTLIRIGQGFLFSGEWWILLFPAITLLALALSVNL
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHH
LGDWLRDALNPRLR
HHHHHHHHCCCCCC
>Mature Secondary Structure 
TDLPVKAAEQSRLRVFLDSDVFYMFRKSPVAVVSSIVFGLLVLSAVFAPLIAPTNPFDP
CCCCCCHHCCCCEEEEECCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
SSLNLMNGFTAPMTPNAFTGESFLLGTDDQGRDVFSTILYGMRVSLFVGVSAVLLAMVLG
CCCHHHCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ITLGLISGYVGGWTETIIMRTADVQLTFPSILVAMLIFGIAKGITPVEYRDQMAIWVLIL
HHHHHHHHHCCCHHHHHHEEECCCEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
AIGLGEWVQFARVVRGATMVEKRKEYVEAARLIGRTPFAIMLRHILPNVLSPVLVIATIT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LALAIIAEATLSFLGVGAPPTQPSLGTLIRIGQGFLFSGEWWILLFPAITLLALALSVNL
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHH
LGDWLRDALNPRLR
HHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800; 8550458 [H]