| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is 110679409
Identifier: 110679409
GI number: 110679409
Start: 2034521
End: 2034691
Strand: Direct
Name: 110679409
Synonym: RD1_2134
Alternate gene names: NA
Gene position: 2034521-2034691 (Clockwise)
Preceding gene: 110679402
Following gene: 110679410
Centisome position: 49.23
GC content: 46.78
Gene sequence:
>171_bases GTGAATTGCAAGAACTGCGTCGGAAATTCGCAGCATGAAGTCTTTATCTTGTGTACAGAATATGATTGTAAGGATGAAGA TTACAACGGGCAGGACGGTGCGCACACCTTTACCCTGCCCACAATGCGCAACATGATCCCACGATCAGTTCAAGATCAGG ACGGCAAATGA
Upstream 100 bases:
>100_bases TCCGTGGCCGTTTTGAGGACCCGCAGGGCGGCGTCCCGATCCAGAGCGTCCTCAAAAGGAGAAAAGGCATTTGCTGTCAT GAAAGGCTCCGTCCGGGGTT
Downstream 100 bases:
>100_bases CACGACTATTTTCAATGGCAGCACTGGCGGCTGCATCAACGGCGACGGCTGCTTGGGCACAAGAGGGCCTTGAGATCATC GGAACGCCTGTGGACGGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 56; Mature: 56
Protein sequence:
>56_residues MNCKNCVGNSQHEVFILCTEYDCKDEDYNGQDGAHTFTLPTMRNMIPRSVQDQDGK
Sequences:
>Translated_56_residues MNCKNCVGNSQHEVFILCTEYDCKDEDYNGQDGAHTFTLPTMRNMIPRSVQDQDGK >Mature_56_residues MNCKNCVGNSQHEVFILCTEYDCKDEDYNGQDGAHTFTLPTMRNMIPRSVQDQDGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6399; Mature: 6399
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.1 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 12.5 %Cys+Met (Translated Protein) 7.1 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 12.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNCKNCVGNSQHEVFILCTEYDCKDEDYNGQDGAHTFTLPTMRNMIPRSVQDQDGK CCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCHHHHCCCCCCCCCCC >Mature Secondary Structure MNCKNCVGNSQHEVFILCTEYDCKDEDYNGQDGAHTFTLPTMRNMIPRSVQDQDGK CCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA