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The map label for this gene is 110679398

Identifier: 110679398

GI number: 110679398

Start: 2023515

End: 2024363

Strand: Reverse

Name: 110679398

Synonym: RD1_2122

Alternate gene names: NA

Gene position: 2024363-2023515 (Counterclockwise)

Preceding gene: 110679399

Following gene: 110679396

Centisome position: 48.98

GC content: 62.66

Gene sequence:

>849_bases
ATGCGAGTGATATTCGGAATGGTTCTTCTGGCGGGCGTCGCCCTTGCCGGTGGCGCGGTATATATGGCCAAGGGCTATAT
TGGCCAGTATCAGGCGGAACTGGCGCGCGCGCAGCAGATGCACAGCGCCATTGTGCCCACGCAACAGGTATTCGTCGCCA
CAAGGCACCTGCGGTATGGCGACACCTTGAAACCCGAGGATGTGCGCGCGGTCAACTGGCCGGTCAACGCCATTCCTCAA
GGGGTCTTCACCGATATCGCAGCGCTCTTCCCCGAAGGGACGGATGAACCACGCCTGATCATCCGCCCGATGGAGCCGAG
TGAAGCGGTGCTCGCGGTCAAGATCACCGAACCCGGCGAAGATATCGGGCTGACCACGCGGCTCGAAAAGGGCATGCGTG
CCTTTGCGATCCGGGTTGATGTGGCAAGCGGTGTGTCGGGCTTCTTGCGGCCCGGGGACAAGGTGGATGTCTATTGGACC
GGCGGCGTGCAAACCGGCAATGGGCGCGAAGACGTCACCAAGCTGATCCAGACCGCCGTGCGCTTGATCGCGGTTGACCA
GATCGACGACCAGATGAATGGCGCGCGCATTGCCCGCACCGTGACGGTCGCCGCAACGCCAGAACAGGTCGCAGCGCTGG
CGCAGGCCCAATCCACCGGCAACCTGTCACTGTCCCTTGTCGGGGTGGGGGATGATGAGGAACTGGATGAGATCAAGGTC
AATCAGGTCTCCCTGCTGGGATTGCAACAGGCCGCCCCCGTGATCGCCGCGCCCGCAGCGCGCGTATGCTCCATCCGCAC
CAGACGCGGCTCAGAAGTTGTGGCGATCCCGATCCCCTGTACAAACTGA

Upstream 100 bases:

>100_bases
GAGATACCGCACGAAAACCGCGAAATGGCCATATTTCACCAGCACCCTCAATACCAAGGCGACGACGCGCGAAGGCGTAT
CGGCAAAACGAGGTGACAGG

Downstream 100 bases:

>100_bases
ACAAAACCATGAGTTTACACAGGCGCAATCGCATAGGTTGCGCCTATTCCCGTTTTGCGTGTTGCCGTTTATCCACATAA
GGAGCACCGCAGAACCCGTT

Product: pilus assembly domain-containing protein

Products: NA

Alternate protein names: Flp Pilus Assembly CpaB; Pilus Assembly Transmembrane Protein; SAF Domain-Containing Protein; Pilus Assembly Protein; Pilus Assembly-Related Exported Protein; CpaB Pilus Assembly Protein; SAF Domain Protein; Pilus Assembly Domain-Containing Protein; Pilus Assembly Protein CpaB; CpaB Family Protein; Flp Pilus Assembly Protein CpaB-Like Protein

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MRVIFGMVLLAGVALAGGAVYMAKGYIGQYQAELARAQQMHSAIVPTQQVFVATRHLRYGDTLKPEDVRAVNWPVNAIPQ
GVFTDIAALFPEGTDEPRLIIRPMEPSEAVLAVKITEPGEDIGLTTRLEKGMRAFAIRVDVASGVSGFLRPGDKVDVYWT
GGVQTGNGREDVTKLIQTAVRLIAVDQIDDQMNGARIARTVTVAATPEQVAALAQAQSTGNLSLSLVGVGDDEELDEIKV
NQVSLLGLQQAAPVIAAPAARVCSIRTRRGSEVVAIPIPCTN

Sequences:

>Translated_282_residues
MRVIFGMVLLAGVALAGGAVYMAKGYIGQYQAELARAQQMHSAIVPTQQVFVATRHLRYGDTLKPEDVRAVNWPVNAIPQ
GVFTDIAALFPEGTDEPRLIIRPMEPSEAVLAVKITEPGEDIGLTTRLEKGMRAFAIRVDVASGVSGFLRPGDKVDVYWT
GGVQTGNGREDVTKLIQTAVRLIAVDQIDDQMNGARIARTVTVAATPEQVAALAQAQSTGNLSLSLVGVGDDEELDEIKV
NQVSLLGLQQAAPVIAAPAARVCSIRTRRGSEVVAIPIPCTN
>Mature_282_residues
MRVIFGMVLLAGVALAGGAVYMAKGYIGQYQAELARAQQMHSAIVPTQQVFVATRHLRYGDTLKPEDVRAVNWPVNAIPQ
GVFTDIAALFPEGTDEPRLIIRPMEPSEAVLAVKITEPGEDIGLTTRLEKGMRAFAIRVDVASGVSGFLRPGDKVDVYWT
GGVQTGNGREDVTKLIQTAVRLIAVDQIDDQMNGARIARTVTVAATPEQVAALAQAQSTGNLSLSLVGVGDDEELDEIKV
NQVSLLGLQQAAPVIAAPAARVCSIRTRRGSEVVAIPIPCTN

Specific function: Unknown

COG id: COG3745

COG function: function code U; Flp pilus assembly protein CpaB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30037; Mature: 30037

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVIFGMVLLAGVALAGGAVYMAKGYIGQYQAELARAQQMHSAIVPTQQVFVATRHLRYG
CHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCC
DTLKPEDVRAVNWPVNAIPQGVFTDIAALFPEGTDEPRLIIRPMEPSEAVLAVKITEPGE
CCCCCCCCEEEECCHHHCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEEEEECCCC
DIGLTTRLEKGMRAFAIRVDVASGVSGFLRPGDKVDVYWTGGVQTGNGREDVTKLIQTAV
CCCCHHHHHCCCEEEEEEEEECCCCHHHCCCCCEEEEEEECCEECCCCHHHHHHHHHHHH
RLIAVDQIDDQMNGARIARTVTVAATPEQVAALAQAQSTGNLSLSLVGVGDDEELDEIKV
HHHHHHHHCCCCCCCEEEEEEEEEECHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCEEE
NQVSLLGLQQAAPVIAAPAARVCSIRTRRGSEVVAIPIPCTN
CEEEEEEHHHCCCEEECCHHHHHHHEECCCCEEEEEECCCCC
>Mature Secondary Structure
MRVIFGMVLLAGVALAGGAVYMAKGYIGQYQAELARAQQMHSAIVPTQQVFVATRHLRYG
CHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCC
DTLKPEDVRAVNWPVNAIPQGVFTDIAALFPEGTDEPRLIIRPMEPSEAVLAVKITEPGE
CCCCCCCCEEEECCHHHCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEEEEECCCC
DIGLTTRLEKGMRAFAIRVDVASGVSGFLRPGDKVDVYWTGGVQTGNGREDVTKLIQTAV
CCCCHHHHHCCCEEEEEEEEECCCCHHHCCCCCEEEEEEECCEECCCCHHHHHHHHHHHH
RLIAVDQIDDQMNGARIARTVTVAATPEQVAALAQAQSTGNLSLSLVGVGDDEELDEIKV
HHHHHHHHCCCCCCCEEEEEEEEEECHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCEEE
NQVSLLGLQQAAPVIAAPAARVCSIRTRRGSEVVAIPIPCTN
CEEEEEEHHHCCCEEECCHHHHHHHEECCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA