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The map label for this gene is pcs [H]

Identifier: 110679358

GI number: 110679358

Start: 1984649

End: 1985347

Strand: Reverse

Name: pcs [H]

Synonym: RD1_2077

Alternate gene names: 110679358

Gene position: 1985347-1984649 (Counterclockwise)

Preceding gene: 110679359

Following gene: 110679351

Centisome position: 48.04

GC content: 57.08

Gene sequence:

>699_bases
ATGACCAATCGAATGGCCGCGCTTGCGGTTCACCTTCTGACCGCAACAGGCGCGGTATTTGCAATGCTGGCGATGCTGGC
CGCCGTGGACGAAAAATGGGACCTGATGTTCCTGTGGCTCGTCGTCGCCTTTTTCGTCGATGGCATAGATGGCCCGCTTG
CCCGGAAATACCACGTCAAGGTCAACGCGCCGGAGTTTGATGGCGTATTGCTCGACCTGATAATCGACTACCTCACCTAT
GTCTTCATCCCCGCCTTTGCGCTGTTCAAATCTGGGCTAATGGATGGCTGGACAGGCTGGGTCGCGATCATCGTGATTAC
CTTTGCCTCGGCCATGTATTTCGCCGATACGCGCATGAAAACAAAGGACAATTCTTTTTCAGGGTTTCCGGGATGCTGGA
ACATGCTAGTGCTGGTGATCTTTGCGCTCGAGCCCAATTTCTGGGTCAGCCTTGCGCTTGTCTCTGTACTTGCCGTTGGC
ATGTTCCTGCCGCTGAAGTTTGTGCACCCGGTGCGCACACGGCGCTGGCGGTGGGTGACGCTGCCCATGGCCATAGCGTG
GACGGGGTTTGCGGGCTGGGCCGCCTGGGTGGATTTCCACCCCGAAAGCTGGGCACATTGGGGATTGGTCACGACATCCG
TCTACCTTCTTTTCGCAGGGGTCGCCCAACAGATCATCCCGGAAAAAGCGCACCACTGA

Upstream 100 bases:

>100_bases
TATGACCGCACCCACCCCAAAGCGTGATCTCTTTGCAATGGATCCCCGCGAAGGCGACATTTCTTTTGCATCCCAAGGCC
GTATCGGTCAAAAAGCCCGC

Downstream 100 bases:

>100_bases
TCCGCAATGACGGCGCATCAGACACCATGAATTTCAGCACAAGCGTTTCAAGTTGATCCTGAAGCATCATGCAAAAAACC
TGATACTCGCAACGCTGCCT

Product: phosphatidylcholine synthase, putative

Products: NA

Alternate protein names: PC synthase; CDP-diglyceride-choline O-phosphatidyltransferase [H]

Number of amino acids: Translated: 232; Mature: 231

Protein sequence:

>232_residues
MTNRMAALAVHLLTATGAVFAMLAMLAAVDEKWDLMFLWLVVAFFVDGIDGPLARKYHVKVNAPEFDGVLLDLIIDYLTY
VFIPAFALFKSGLMDGWTGWVAIIVITFASAMYFADTRMKTKDNSFSGFPGCWNMLVLVIFALEPNFWVSLALVSVLAVG
MFLPLKFVHPVRTRRWRWVTLPMAIAWTGFAGWAAWVDFHPESWAHWGLVTTSVYLLFAGVAQQIIPEKAHH

Sequences:

>Translated_232_residues
MTNRMAALAVHLLTATGAVFAMLAMLAAVDEKWDLMFLWLVVAFFVDGIDGPLARKYHVKVNAPEFDGVLLDLIIDYLTY
VFIPAFALFKSGLMDGWTGWVAIIVITFASAMYFADTRMKTKDNSFSGFPGCWNMLVLVIFALEPNFWVSLALVSVLAVG
MFLPLKFVHPVRTRRWRWVTLPMAIAWTGFAGWAAWVDFHPESWAHWGLVTTSVYLLFAGVAQQIIPEKAHH
>Mature_231_residues
TNRMAALAVHLLTATGAVFAMLAMLAAVDEKWDLMFLWLVVAFFVDGIDGPLARKYHVKVNAPEFDGVLLDLIIDYLTYV
FIPAFALFKSGLMDGWTGWVAIIVITFASAMYFADTRMKTKDNSFSGFPGCWNMLVLVIFALEPNFWVSLALVSVLAVGM
FLPLKFVHPVRTRRWRWVTLPMAIAWTGFAGWAAWVDFHPESWAHWGLVTTSVYLLFAGVAQQIIPEKAHH

Specific function: Condenses choline with CDP-diglyceride to produce phosphatidylcholine and CMP [H]

COG id: COG1183

COG function: function code I; Phosphatidylserine synthase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000462 [H]

Pfam domain/function: PF01066 CDP-OH_P_transf [H]

EC number: =2.7.8.24 [H]

Molecular weight: Translated: 26106; Mature: 25975

Theoretical pI: Translated: 7.24; Mature: 7.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNRMAALAVHLLTATGAVFAMLAMLAAVDEKWDLMFLWLVVAFFVDGIDGPLARKYHVK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEE
VNAPEFDGVLLDLIIDYLTYVFIPAFALFKSGLMDGWTGWVAIIVITFASAMYFADTRMK
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC
TKDNSFSGFPGCWNMLVLVIFALEPNFWVSLALVSVLAVGMFLPLKFVHPVRTRRWRWVT
CCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHCCEEEEE
LPMAIAWTGFAGWAAWVDFHPESWAHWGLVTTSVYLLFAGVAQQIIPEKAHH
EHHHHHHHCHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TNRMAALAVHLLTATGAVFAMLAMLAAVDEKWDLMFLWLVVAFFVDGIDGPLARKYHVK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEE
VNAPEFDGVLLDLIIDYLTYVFIPAFALFKSGLMDGWTGWVAIIVITFASAMYFADTRMK
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC
TKDNSFSGFPGCWNMLVLVIFALEPNFWVSLALVSVLAVGMFLPLKFVHPVRTRRWRWVT
CCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHCCEEEEE
LPMAIAWTGFAGWAAWVDFHPESWAHWGLVTTSVYLLFAGVAQQIIPEKAHH
EHHHHHHHCHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11214968 [H]