Click here to switch to the map view.

The map label for this gene is trkA [C]

Identifier: 110679296

GI number: 110679296

Start: 1920822

End: 1922603

Strand: Direct

Name: trkA [C]

Synonym: RD1_2014

Alternate gene names: 110679296

Gene position: 1920822-1922603 (Clockwise)

Preceding gene: 110679295

Following gene: 110679300

Centisome position: 46.47

GC content: 60.04

Gene sequence:

>1782_bases
TTGATACATCTCTTCCAGCTTCCCGCTCAGGCAGCGCCGCTTCTGACGCTTGCCATCGTGGGCGTCATGTTCGTTCTATT
CGTCCGTGAAACCTTTCCCACAGAGGTTGTGGCCATTGCGGGCGCGGCGCTGATGCTGGTGATGGGGGTGTTGCCCTATG
ACGATGCACGCGCTGTGCTGAGCAACCCCGCGCCCTGGACCATCGCCGCGATGTTCATTGTCATGGGCGCGTTGGTGCGC
ACGGGTGCGCTTGATGTGTTGACGCGCGCGGCGGAAAGGCAGGCAAAGGTCCGCCCCAAGGCCGCTGTTGCCGGGGTGAT
ATTATCCGTCATGGGAGCCTCTGCGATCATGAACAACACGCCGGTCGTTGTGGTGATGATCCCGGTGGTTGTGCAATTGA
GTAAAACGCTGGGCGTCAAGGCTTCCAAACTGCTGATCCCCTTGAGCTATGCGGCGATTATGGGCGGTTCGCTGACGCTG
CTTGGCACATCGACAAACCTCCTCGTCGATGGGGTGGCGCGCACCGAGGGGCTGGCCCCGTTTACCATTTTCGAGATCAT
GCCGATCGGGCTGGTGGTTTGTGCCTGGGGGCTGACCTATCTTGCCTTCATCGCGCCGCGCATTTTGCCAGAGCGCGACA
GTATGGCGAATATGCTGACCGACCGCTCGAAGATGAAATTCTTTACGGAAGCGGTAATCCCGCCTGACAGCAACCTCATC
GGGCGTTCGGTGCTGGGGGTGCAATTGTTCAAGCGGGAAGGCGTGCGTCTGATCGACGTCATTCGCGGCGATCTGTCGTT
GCGACGGGACCTCAGGGCGGTTGAACTGGAAGTCGGTGACCGGGTGGTTTTACGCACGCAGATGACCGAGTTGCTGAGCC
TTCAGACAAACAAGGAATTGCGCCGCGTGGATCAGGTCTCTGCAGTGGAAACGACCACGGTAGAGGTATTGATCACGCCG
GGGTGTCGCATGGTCGGGCGCTCGCTTGGCGGGATGCGCCTGCGGCGGCGCTACGGTGTGTACCCGCTGGCGGTGCACCG
GCGGAACCAGAACATCGGGCAAAAGCTGGATTCCCTCATCGTCAAGGTCGGGGATACCCTGCTGCTGGAGGGGGCGCCGG
CGGATATCCAGCGCCTTGCGGATGACATGGACGTGGTGGACGTTTCGCACCCCACGGAACGGGCGTATCGGCGCAGCCAT
GCGCCGATTGCCATCGCCGCCCTGGCCGGGATCGTTGGTTTTGCGGCCTTTAATGTCGCACCCATTCTGCTTCTGGCCGT
TGTTGCGGTCGCGCTTGTGTTGGTGACCGGGTGCATCGACGCGGATGAAGCGTTCTCCTTTGTGGAGGGGCGCTTGCTTG
CGCTGATCTTTTCGATGCTGACGGTCGGTGCCGCACTACAGCAATCCGGGGCTATCGCATTGATCGTTGATGGTGTGTCG
CCGGTTTTGATGACAATGCCGCCTGCTGTCGTTGTGCTGGTGGTTTTTGCCATGACTTCTACCTTGACCGAAATCGTGTC
CAATAATGCGGTTGCGGTGATCATGACACCGCTTGCGATTGGGCTGGGCACTGCTTTGGGGCTTGACCCGCGCCCGCTGG
TGGTTGCCGTCATGATCGCGGCCTCTTGCGCCTTTGCCACCCCGATCGGATATCAGACAAACACCCTTGTCTACGGTCCC
GGTGGGTATCGTTTTACCGATTTTACGCGGGTCGGCTTGCCGCTCAACATAAGTATGGCGGTGATCGTTTCGCTCGTTAT
TCCGCTGATCTGGCCGCTCTGA

Upstream 100 bases:

>100_bases
CATGTATCTTGTTCAGCCGCGGGGCAAGGGCGGGCTTGCTCAAGTGTGACCGATCAGCGAAAGTGTCCGACAGGCGAGCA
AAGCACGGAGCGCATCTGCA

Downstream 100 bases:

>100_bases
AACACCCGGCCACGGCCGCTCGGCAGCCCCTCAGGCGACCGGTGGTTCGCCAAAGGAAACGGTGCTGCCATCCTTGTCGA
GCAGGGACCAGCGCGCCACG

Product: Trk system potassium uptake protein trkA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 593; Mature: 593

Protein sequence:

>593_residues
MIHLFQLPAQAAPLLTLAIVGVMFVLFVRETFPTEVVAIAGAALMLVMGVLPYDDARAVLSNPAPWTIAAMFIVMGALVR
TGALDVLTRAAERQAKVRPKAAVAGVILSVMGASAIMNNTPVVVVMIPVVVQLSKTLGVKASKLLIPLSYAAIMGGSLTL
LGTSTNLLVDGVARTEGLAPFTIFEIMPIGLVVCAWGLTYLAFIAPRILPERDSMANMLTDRSKMKFFTEAVIPPDSNLI
GRSVLGVQLFKREGVRLIDVIRGDLSLRRDLRAVELEVGDRVVLRTQMTELLSLQTNKELRRVDQVSAVETTTVEVLITP
GCRMVGRSLGGMRLRRRYGVYPLAVHRRNQNIGQKLDSLIVKVGDTLLLEGAPADIQRLADDMDVVDVSHPTERAYRRSH
APIAIAALAGIVGFAAFNVAPILLLAVVAVALVLVTGCIDADEAFSFVEGRLLALIFSMLTVGAALQQSGAIALIVDGVS
PVLMTMPPAVVVLVVFAMTSTLTEIVSNNAVAVIMTPLAIGLGTALGLDPRPLVVAVMIAASCAFATPIGYQTNTLVYGP
GGYRFTDFTRVGLPLNISMAVIVSLVIPLIWPL

Sequences:

>Translated_593_residues
MIHLFQLPAQAAPLLTLAIVGVMFVLFVRETFPTEVVAIAGAALMLVMGVLPYDDARAVLSNPAPWTIAAMFIVMGALVR
TGALDVLTRAAERQAKVRPKAAVAGVILSVMGASAIMNNTPVVVVMIPVVVQLSKTLGVKASKLLIPLSYAAIMGGSLTL
LGTSTNLLVDGVARTEGLAPFTIFEIMPIGLVVCAWGLTYLAFIAPRILPERDSMANMLTDRSKMKFFTEAVIPPDSNLI
GRSVLGVQLFKREGVRLIDVIRGDLSLRRDLRAVELEVGDRVVLRTQMTELLSLQTNKELRRVDQVSAVETTTVEVLITP
GCRMVGRSLGGMRLRRRYGVYPLAVHRRNQNIGQKLDSLIVKVGDTLLLEGAPADIQRLADDMDVVDVSHPTERAYRRSH
APIAIAALAGIVGFAAFNVAPILLLAVVAVALVLVTGCIDADEAFSFVEGRLLALIFSMLTVGAALQQSGAIALIVDGVS
PVLMTMPPAVVVLVVFAMTSTLTEIVSNNAVAVIMTPLAIGLGTALGLDPRPLVVAVMIAASCAFATPIGYQTNTLVYGP
GGYRFTDFTRVGLPLNISMAVIVSLVIPLIWPL
>Mature_593_residues
MIHLFQLPAQAAPLLTLAIVGVMFVLFVRETFPTEVVAIAGAALMLVMGVLPYDDARAVLSNPAPWTIAAMFIVMGALVR
TGALDVLTRAAERQAKVRPKAAVAGVILSVMGASAIMNNTPVVVVMIPVVVQLSKTLGVKASKLLIPLSYAAIMGGSLTL
LGTSTNLLVDGVARTEGLAPFTIFEIMPIGLVVCAWGLTYLAFIAPRILPERDSMANMLTDRSKMKFFTEAVIPPDSNLI
GRSVLGVQLFKREGVRLIDVIRGDLSLRRDLRAVELEVGDRVVLRTQMTELLSLQTNKELRRVDQVSAVETTTVEVLITP
GCRMVGRSLGGMRLRRRYGVYPLAVHRRNQNIGQKLDSLIVKVGDTLLLEGAPADIQRLADDMDVVDVSHPTERAYRRSH
APIAIAALAGIVGFAAFNVAPILLLAVVAVALVLVTGCIDADEAFSFVEGRLLALIFSMLTVGAALQQSGAIALIVDGVS
PVLMTMPPAVVVLVVFAMTSTLTEIVSNNAVAVIMTPLAIGLGTALGLDPRPLVVAVMIAASCAFATPIGYQTNTLVYGP
GGYRFTDFTRVGLPLNISMAVIVSLVIPLIWPL

Specific function: Unknown

COG id: COG0471

COG function: function code P; Di- and tricarboxylate transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK C-terminal domains [H]

Homologues:

Organism=Escherichia coli, GI1788629, Length=612, Percent_Identity=28.7581699346405, Blast_Score=199, Evalue=5e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001898
- InterPro:   IPR006037 [H]

Pfam domain/function: PF00939 Na_sulph_symp; PF02080 TrkA_C [H]

EC number: NA

Molecular weight: Translated: 63138; Mature: 63138

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: PS01271 NA_SULFATE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHLFQLPAQAAPLLTLAIVGVMFVLFVRETFPTEVVAIAGAALMLVMGVLPYDDARAVL
CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHH
SNPAPWTIAAMFIVMGALVRTGALDVLTRAAERQAKVRPKAAVAGVILSVMGASAIMNNT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC
PVVVVMIPVVVQLSKTLGVKASKLLIPLSYAAIMGGSLTLLGTSTNLLVDGVARTEGLAP
CEEEEHHHHHHHHHHHHCCCHHHEEEEHHHHHHHCCCEEEEECCCCCEEECHHHCCCCCC
FTIFEIMPIGLVVCAWGLTYLAFIAPRILPERDSMANMLTDRSKMKFFTEAVIPPDSNLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHH
GRSVLGVQLFKREGVRLIDVIRGDLSLRRDLRAVELEVGDRVVLRTQMTELLSLQTNKEL
HHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCCEEEEECCCEEEHHHHHHHHHHHHCCHHH
RRVDQVSAVETTTVEVLITPGCRMVGRSLGGMRLRRRYGVYPLAVHRRNQNIGQKLDSLI
HHHHHHHHEEEEEEEEEECCCHHHHHHHHCHHHHHHHCCCCEEEEECCCCHHHHHHHHHH
VKVGDTLLLEGAPADIQRLADDMDVVDVSHPTERAYRRSHAPIAIAALAGIVGFAAFNVA
HHHCCEEEECCCCHHHHHHHCCCCEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
PILLLAVVAVALVLVTGCIDADEAFSFVEGRLLALIFSMLTVGAALQQSGAIALIVDGVS
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC
PVLMTMPPAVVVLVVFAMTSTLTEIVSNNAVAVIMTPLAIGLGTALGLDPRPLVVAVMIA
CHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHCCCCCCHHHHHHHHH
ASCAFATPIGYQTNTLVYGPGGYRFTDFTRVGLPLNISMAVIVSLVIPLIWPL
HHHHHCCCCCCCCCEEEECCCCCEECCEEEECCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIHLFQLPAQAAPLLTLAIVGVMFVLFVRETFPTEVVAIAGAALMLVMGVLPYDDARAVL
CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHH
SNPAPWTIAAMFIVMGALVRTGALDVLTRAAERQAKVRPKAAVAGVILSVMGASAIMNNT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC
PVVVVMIPVVVQLSKTLGVKASKLLIPLSYAAIMGGSLTLLGTSTNLLVDGVARTEGLAP
CEEEEHHHHHHHHHHHHCCCHHHEEEEHHHHHHHCCCEEEEECCCCCEEECHHHCCCCCC
FTIFEIMPIGLVVCAWGLTYLAFIAPRILPERDSMANMLTDRSKMKFFTEAVIPPDSNLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHH
GRSVLGVQLFKREGVRLIDVIRGDLSLRRDLRAVELEVGDRVVLRTQMTELLSLQTNKEL
HHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCCEEEEECCCEEEHHHHHHHHHHHHCCHHH
RRVDQVSAVETTTVEVLITPGCRMVGRSLGGMRLRRRYGVYPLAVHRRNQNIGQKLDSLI
HHHHHHHHEEEEEEEEEECCCHHHHHHHHCHHHHHHHCCCCEEEEECCCCHHHHHHHHHH
VKVGDTLLLEGAPADIQRLADDMDVVDVSHPTERAYRRSHAPIAIAALAGIVGFAAFNVA
HHHCCEEEECCCCHHHHHHHCCCCEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
PILLLAVVAVALVLVTGCIDADEAFSFVEGRLLALIFSMLTVGAALQQSGAIALIVDGVS
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC
PVLMTMPPAVVVLVVFAMTSTLTEIVSNNAVAVIMTPLAIGLGTALGLDPRPLVVAVMIA
CHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHCCCCCCHHHHHHHHH
ASCAFATPIGYQTNTLVYGPGGYRFTDFTRVGLPLNISMAVIVSLVIPLIWPL
HHHHHCCCCCCCCCEEEECCCCCEECCEEEECCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]