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The map label for this gene is ygfA [H]

Identifier: 110679293

GI number: 110679293

Start: 1918321

End: 1918893

Strand: Direct

Name: ygfA [H]

Synonym: RD1_2010

Alternate gene names: 110679293

Gene position: 1918321-1918893 (Clockwise)

Preceding gene: 110679292

Following gene: 110679294

Centisome position: 46.41

GC content: 61.08

Gene sequence:

>573_bases
ATGACGGATATGACCCAAATCAAGGCGGCCGCGCGCAAGGCTGCCTTTGCGCGTCGTGACGCGGCGCATGCGAAGAATAC
AGGGACCGGGGCGGGGATGCTGTCGAGCGTTCTGGCGGGCTATCGCGGGGTGCCTACGGCTGGCTATATGCCGATCCGTT
CGGAAATCGACCCCATGCCCGCGATGATCGAGGCCGCGGCCCATGGTCCGGTTGGTGTGCCGGTGATCATCGGCGCGGGT
CAACCCCTGCGCTTTGCCCGCTGGGAGCCCGACATGGAAATGGTCAGCGGTGAATTCGGCGTTCAGATCCCCGCCCATGC
CGAGTATTTCGAACCTGAGATTGTGATTGCGCCGCTCGTGGCCTTTGATGCACAGGGGGGAAGATTGGGGTATGGCGGCG
GGTTTTATGATCGCACGCTTGAGGGTTTGCGCGCCAAACGCGCGACCCTTGCCATTGGATTCGCCTATGCGGCGCAAATT
GCCGATACGCTGCCACTGGAGCCAACGGATCAACCGCTGGATGCCATCGTGACGGAGCAGAAGATCTATGATTTTCGCTC
AAGTGATGCATGA

Upstream 100 bases:

>100_bases
TGGGCATTGACCCGGCGCTGGCCTCGGGTGCATTTGTGACAACCGTCACCGATGTGGTCGGTTTTTTCGCCTTTCTTGGC
ATTGCAGTTATGGTGCTTTT

Downstream 100 bases:

>100_bases
ATAAATAGCTATAAAATATTGATAATATTAATTGTTAGGTATTGTTTTTTGGTGCCTTCCGCTGTCCTGTTAAAGGGTGC
GGCACCGTCGGTCTTTGCAT

Product: 5-formyltetrahydrofolate cyclo-ligase, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 189

Protein sequence:

>190_residues
MTDMTQIKAAARKAAFARRDAAHAKNTGTGAGMLSSVLAGYRGVPTAGYMPIRSEIDPMPAMIEAAAHGPVGVPVIIGAG
QPLRFARWEPDMEMVSGEFGVQIPAHAEYFEPEIVIAPLVAFDAQGGRLGYGGGFYDRTLEGLRAKRATLAIGFAYAAQI
ADTLPLEPTDQPLDAIVTEQKIYDFRSSDA

Sequences:

>Translated_190_residues
MTDMTQIKAAARKAAFARRDAAHAKNTGTGAGMLSSVLAGYRGVPTAGYMPIRSEIDPMPAMIEAAAHGPVGVPVIIGAG
QPLRFARWEPDMEMVSGEFGVQIPAHAEYFEPEIVIAPLVAFDAQGGRLGYGGGFYDRTLEGLRAKRATLAIGFAYAAQI
ADTLPLEPTDQPLDAIVTEQKIYDFRSSDA
>Mature_189_residues
TDMTQIKAAARKAAFARRDAAHAKNTGTGAGMLSSVLAGYRGVPTAGYMPIRSEIDPMPAMIEAAAHGPVGVPVIIGAGQ
PLRFARWEPDMEMVSGEFGVQIPAHAEYFEPEIVIAPLVAFDAQGGRLGYGGGFYDRTLEGLRAKRATLAIGFAYAAQIA
DTLPLEPTDQPLDAIVTEQKIYDFRSSDA

Specific function: Unknown

COG id: COG0212

COG function: function code H; 5-formyltetrahydrofolate cyclo-ligase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 5-formyltetrahydrofolate cyclo-ligase family [H]

Homologues:

Organism=Escherichia coli, GI1789278, Length=148, Percent_Identity=33.7837837837838, Blast_Score=78, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002698 [H]

Pfam domain/function: PF01812 5-FTHF_cyc-lig [H]

EC number: NA

Molecular weight: Translated: 20213; Mature: 20082

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDMTQIKAAARKAAFARRDAAHAKNTGTGAGMLSSVLAGYRGVPTAGYMPIRSEIDPMP
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCH
AMIEAAAHGPVGVPVIIGAGQPLRFARWEPDMEMVSGEFGVQIPAHAEYFEPEIVIAPLV
HHHHHHCCCCCCCEEEEECCCCCEEECCCCCHHHHCCCCCEECCCCCCCCCCCEEEEEHE
AFDAQGGRLGYGGGFYDRTLEGLRAKRATLAIGFAYAAQIADTLPLEPTDQPLDAIVTEQ
EECCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
KIYDFRSSDA
HHHHCCCCCC
>Mature Secondary Structure 
TDMTQIKAAARKAAFARRDAAHAKNTGTGAGMLSSVLAGYRGVPTAGYMPIRSEIDPMP
CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCH
AMIEAAAHGPVGVPVIIGAGQPLRFARWEPDMEMVSGEFGVQIPAHAEYFEPEIVIAPLV
HHHHHHCCCCCCCEEEEECCCCCEEECCCCCHHHHCCCCCEECCCCCCCCCCCEEEEEHE
AFDAQGGRLGYGGGFYDRTLEGLRAKRATLAIGFAYAAQIADTLPLEPTDQPLDAIVTEQ
EECCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
KIYDFRSSDA
HHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]