| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is mgtE [H]
Identifier: 110679292
GI number: 110679292
Start: 1916933
End: 1918324
Strand: Direct
Name: mgtE [H]
Synonym: RD1_2009
Alternate gene names: 110679292
Gene position: 1916933-1918324 (Clockwise)
Preceding gene: 110679290
Following gene: 110679293
Centisome position: 46.38
GC content: 58.91
Gene sequence:
>1392_bases ATGTCGGATCAAACCGAAACAGGACCAGTGGAGGTCGAGGACGACGCCTATGTGCTCGGTCCCAAAGCGATATCCGCCAT TCTTTATGCCGTGGACATCGAGGATCAGGCCAAGCTGACCGCGTTGATGGAGCCTTTGCACCCGGCGGATATCGCGGACC TGCTGGAACAGATCAACGCCTTTGACCGCGCGCGGCTGATCCGTCTTTATGATCGTGAGTTTGACGGGGAAATCCTTTCG GAACTGGATGAAAGCATCCGCGAAGAGGTCATCGCCGTTCTCACACCTCAGGTCTTGACGCAAGCGGTCCGCGAGATGGA CAGCGATGATGTGGTCGATCTGGTTGAGGATCTGGAAGATCATCAGCAGGAAACGATCCTTGATGCGCTTGAGGATGTGG ACCGCGCCGCTGTGCGGCAGGCGCTGGGGTATCCCGAATATTCCGCCGGGCGTCTGATGCAGCGCGAAGTCGTCATGGCG CCCGAGCATTGGACCGTCGGTCAGGCGATTGATCATTTGCGCGCAACGCCTGAAGAAGAGCTGCCCGATCAGTTTTATCA CATCGTGATCGTCGATCCGCGCCTGCATCCGGTGGGGAATGTCACGCTTGGCAAGCTGATGCGGTCCCGGCGTGAAACCC GACTCATGGATTTGCTGGAAGAAACCTTTCAGATCATTCCCGCCACGCAGGAGGAATCAGACGTCGCCTATGCGTTCAAT CAGTATCACCTGATTTCCGCGCCGGTGGTGGATGAGGAAGGGCGGTTGATCGGCATTATCACCATAGACGATGCCATGGC CGTTCTGGATGAGGAACACGAGGAAGACATCCTGCGGCTTGCCGGGGTCGGGGAGGGGTCCTTGTCGGACCGCGTTGCAG AAACGAGCAAACAGCGGCTGCCCTGGCTGGCGGTGAATTTGCTCACGGCGATCGCGGCGTCCCTTGTGATTGCCCAGTTC GAAGAGGCCATTGCGCAGATCGTGGCGCTGGCGGTTTTGATGCCCATCGTGGCGTCCATGGGCGGAAATGCCGGGACCCA GTCGCTCACGGTTGCGGTGCGCGCCCTGGCGACCAAGGACCTCACCGGCGCCAACCTGTGGCGTGTGATACGGCGCGAGG TTCTGGTGGGCGCGATCAACGGGCTGATCTTTGCGGTGGTGATCGGTATTGTCGGTGTGATCTGGTTTGGCTCACCTGCG CTGGGGTATGTCATTGCCATCGCGATGATCATCAACATGATCGTCGCCGGGCTTGCGGGCACGGCCATTCCGGTTCTTCT GGACCGCATGGGCATTGACCCGGCGCTGGCCTCGGGTGCATTTGTGACAACCGTCACCGATGTGGTCGGTTTTTTCGCCT TTCTTGGCATTGCAGTTATGGTGCTTTTATGA
Upstream 100 bases:
>100_bases TCTTAGGCGCTTGCCCCGGCAACAGCAACGATCATCCGCGCGCGCCATTGTAACCACATTGGCGCGCGCCTATTGTCTGC CCTGCAGCAGGAGGGCGCAG
Downstream 100 bases:
>100_bases CGGATATGACCCAAATCAAGGCGGCCGCGCGCAAGGCTGCCTTTGCGCGTCGTGACGCGGCGCATGCGAAGAATACAGGG ACCGGGGCGGGGATGCTGTC
Product: putative magnesium transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 463; Mature: 462
Protein sequence:
>463_residues MSDQTETGPVEVEDDAYVLGPKAISAILYAVDIEDQAKLTALMEPLHPADIADLLEQINAFDRARLIRLYDREFDGEILS ELDESIREEVIAVLTPQVLTQAVREMDSDDVVDLVEDLEDHQQETILDALEDVDRAAVRQALGYPEYSAGRLMQREVVMA PEHWTVGQAIDHLRATPEEELPDQFYHIVIVDPRLHPVGNVTLGKLMRSRRETRLMDLLEETFQIIPATQEESDVAYAFN QYHLISAPVVDEEGRLIGIITIDDAMAVLDEEHEEDILRLAGVGEGSLSDRVAETSKQRLPWLAVNLLTAIAASLVIAQF EEAIAQIVALAVLMPIVASMGGNAGTQSLTVAVRALATKDLTGANLWRVIRREVLVGAINGLIFAVVIGIVGVIWFGSPA LGYVIAIAMIINMIVAGLAGTAIPVLLDRMGIDPALASGAFVTTVTDVVGFFAFLGIAVMVLL
Sequences:
>Translated_463_residues MSDQTETGPVEVEDDAYVLGPKAISAILYAVDIEDQAKLTALMEPLHPADIADLLEQINAFDRARLIRLYDREFDGEILS ELDESIREEVIAVLTPQVLTQAVREMDSDDVVDLVEDLEDHQQETILDALEDVDRAAVRQALGYPEYSAGRLMQREVVMA PEHWTVGQAIDHLRATPEEELPDQFYHIVIVDPRLHPVGNVTLGKLMRSRRETRLMDLLEETFQIIPATQEESDVAYAFN QYHLISAPVVDEEGRLIGIITIDDAMAVLDEEHEEDILRLAGVGEGSLSDRVAETSKQRLPWLAVNLLTAIAASLVIAQF EEAIAQIVALAVLMPIVASMGGNAGTQSLTVAVRALATKDLTGANLWRVIRREVLVGAINGLIFAVVIGIVGVIWFGSPA LGYVIAIAMIINMIVAGLAGTAIPVLLDRMGIDPALASGAFVTTVTDVVGFFAFLGIAVMVLL >Mature_462_residues SDQTETGPVEVEDDAYVLGPKAISAILYAVDIEDQAKLTALMEPLHPADIADLLEQINAFDRARLIRLYDREFDGEILSE LDESIREEVIAVLTPQVLTQAVREMDSDDVVDLVEDLEDHQQETILDALEDVDRAAVRQALGYPEYSAGRLMQREVVMAP EHWTVGQAIDHLRATPEEELPDQFYHIVIVDPRLHPVGNVTLGKLMRSRRETRLMDLLEETFQIIPATQEESDVAYAFNQ YHLISAPVVDEEGRLIGIITIDDAMAVLDEEHEEDILRLAGVGEGSLSDRVAETSKQRLPWLAVNLLTAIAASLVIAQFE EAIAQIVALAVLMPIVASMGGNAGTQSLTVAVRALATKDLTGANLWRVIRREVLVGAINGLIFAVVIGIVGVIWFGSPAL GYVIAIAMIINMIVAGLAGTAIPVLLDRMGIDPALASGAFVTTVTDVVGFFAFLGIAVMVLL
Specific function: Acts as a magnesium transporter [H]
COG id: COG2239
COG function: function code P; Mg/Co/Ni transporter MgtE (contains CBS domain)
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR006668 - InterPro: IPR006667 - InterPro: IPR006669 [H]
Pfam domain/function: PF00571 CBS; PF01769 MgtE; PF03448 MgtE_N [H]
EC number: NA
Molecular weight: Translated: 50444; Mature: 50312
Theoretical pI: Translated: 4.04; Mature: 4.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDQTETGPVEVEDDAYVLGPKAISAILYAVDIEDQAKLTALMEPLHPADIADLLEQINA CCCCCCCCCEEECCCCEEECHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHH FDRARLIRLYDREFDGEILSELDESIREEVIAVLTPQVLTQAVREMDSDDVVDLVEDLED HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHH HQQETILDALEDVDRAAVRQALGYPEYSAGRLMQREVVMAPEHWTVGQAIDHLRATPEEE HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEECCCCCCHHHHHHHHHCCCCCC LPDQFYHIVIVDPRLHPVGNVTLGKLMRSRRETRLMDLLEETFQIIPATQEESDVAYAFN CCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHC QYHLISAPVVDEEGRLIGIITIDDAMAVLDEEHEEDILRLAGVGEGSLSDRVAETSKQRL CEEEEECCCCCCCCCEEEEEEECHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCC PWLAVNLLTAIAASLVIAQFEEAIAQIVALAVLMPIVASMGGNAGTQSLTVAVRALATKD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC LTGANLWRVIRREVLVGAINGLIFAVVIGIVGVIWFGSPALGYVIAIAMIINMIVAGLAG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH TAIPVLLDRMGIDPALASGAFVTTVTDVVGFFAFLGIAVMVLL HHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure SDQTETGPVEVEDDAYVLGPKAISAILYAVDIEDQAKLTALMEPLHPADIADLLEQINA CCCCCCCCEEECCCCEEECHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHH FDRARLIRLYDREFDGEILSELDESIREEVIAVLTPQVLTQAVREMDSDDVVDLVEDLED HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHH HQQETILDALEDVDRAAVRQALGYPEYSAGRLMQREVVMAPEHWTVGQAIDHLRATPEEE HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEECCCCCCHHHHHHHHHCCCCCC LPDQFYHIVIVDPRLHPVGNVTLGKLMRSRRETRLMDLLEETFQIIPATQEESDVAYAFN CCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHC QYHLISAPVVDEEGRLIGIITIDDAMAVLDEEHEEDILRLAGVGEGSLSDRVAETSKQRL CEEEEECCCCCCCCCEEEEEEECHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCC PWLAVNLLTAIAASLVIAQFEEAIAQIVALAVLMPIVASMGGNAGTQSLTVAVRALATKD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC LTGANLWRVIRREVLVGAINGLIFAVVIGIVGVIWFGSPALGYVIAIAMIINMIVAGLAG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH TAIPVLLDRMGIDPALASGAFVTTVTDVVGFFAFLGIAVMVLL HHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]