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The map label for this gene is 110679278

Identifier: 110679278

GI number: 110679278

Start: 1905278

End: 1905937

Strand: Direct

Name: 110679278

Synonym: RD1_1995

Alternate gene names: NA

Gene position: 1905278-1905937 (Clockwise)

Preceding gene: 110679276

Following gene: 110679287

Centisome position: 46.1

GC content: 60.3

Gene sequence:

>660_bases
ATGGAGTGGACGCGCTACATTGACGGATACTGCGAACGAATGGGGCCTGAATACTGGGCGGAACCCATCAATGCGGTGAC
AAATCTGGCCTTTGTCATTGCGGCGCTGGTGATGTGGCGGCGTGCGCGCGGGCTCGCTTTGGCGCGCGCCTTATGCGTCG
TCTTGGGGTTGATCGGGATCGGCAGCTATCTGTTTCATACGCACGCGCAGGTCTGGGCCGCCATGGCGGATGTATTGCCC
ATCATCGGTTTCATTCTGCTTTATCTGTTTGCGGTGAATCGCGCGGCCTTTGACGTGAACGGCTGGGCCGCCCTTGGGCT
GACGGCGCTTTTCATTCCCTACGCCGGCATGATGGTCCCGGCGTTTTCCCTGATCCCGGCGCTCGGCGGATCGGCGGCCT
ATGCGCCCGTGCCGCTGCTGATTTTCCTCTACGCCGGATTTCTGCGCCACCGGTTACCGGAGTTTGCCCGTGGTCTGGCG
ATCGGGGCGGGGTTGCTGGTGGTTTCTTTGACCTTTCGCACGCTGGATGAGCCGGCTTGTGACGCCATCCCGATTGGCAC
GCATTTCATGTGGCATGTGCTGAACGGTGTGATGCTGGGCTGGATGATCGAGGTTTACGTCAGGCTCATGCGCGAAAAGG
CTGAAGAAGGTCGCGCATAA

Upstream 100 bases:

>100_bases
ATTGAACCTCTCCCTCTCTGCAATACTTGGACCTTAGACGCGGATGCCGCTTTAGGCAAAACCGTCGTTGGCCGCATGTT
CAGGTGCAAGGGAGACAGAA

Downstream 100 bases:

>100_bases
TCGGCAGACCTGCCTTGGCGACACGCCCGGCCCACATGAAAAAAGGCTGCGCGGGGTGCACAGCCTTTGAACGTTTTTCG
GGGAAAGATCCGGTTACTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MEWTRYIDGYCERMGPEYWAEPINAVTNLAFVIAALVMWRRARGLALARALCVVLGLIGIGSYLFHTHAQVWAAMADVLP
IIGFILLYLFAVNRAAFDVNGWAALGLTALFIPYAGMMVPAFSLIPALGGSAAYAPVPLLIFLYAGFLRHRLPEFARGLA
IGAGLLVVSLTFRTLDEPACDAIPIGTHFMWHVLNGVMLGWMIEVYVRLMREKAEEGRA

Sequences:

>Translated_219_residues
MEWTRYIDGYCERMGPEYWAEPINAVTNLAFVIAALVMWRRARGLALARALCVVLGLIGIGSYLFHTHAQVWAAMADVLP
IIGFILLYLFAVNRAAFDVNGWAALGLTALFIPYAGMMVPAFSLIPALGGSAAYAPVPLLIFLYAGFLRHRLPEFARGLA
IGAGLLVVSLTFRTLDEPACDAIPIGTHFMWHVLNGVMLGWMIEVYVRLMREKAEEGRA
>Mature_219_residues
MEWTRYIDGYCERMGPEYWAEPINAVTNLAFVIAALVMWRRARGLALARALCVVLGLIGIGSYLFHTHAQVWAAMADVLP
IIGFILLYLFAVNRAAFDVNGWAALGLTALFIPYAGMMVPAFSLIPALGGSAAYAPVPLLIFLYAGFLRHRLPEFARGLA
IGAGLLVVSLTFRTLDEPACDAIPIGTHFMWHVLNGVMLGWMIEVYVRLMREKAEEGRA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24132; Mature: 24132

Theoretical pI: Translated: 7.55; Mature: 7.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEWTRYIDGYCERMGPEYWAEPINAVTNLAFVIAALVMWRRARGLALARALCVVLGLIGI
CCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GSYLFHTHAQVWAAMADVLPIIGFILLYLFAVNRAAFDVNGWAALGLTALFIPYAGMMVP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
AFSLIPALGGSAAYAPVPLLIFLYAGFLRHRLPEFARGLAIGAGLLVVSLTFRTLDEPAC
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DAIPIGTHFMWHVLNGVMLGWMIEVYVRLMREKAEEGRA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEWTRYIDGYCERMGPEYWAEPINAVTNLAFVIAALVMWRRARGLALARALCVVLGLIGI
CCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GSYLFHTHAQVWAAMADVLPIIGFILLYLFAVNRAAFDVNGWAALGLTALFIPYAGMMVP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
AFSLIPALGGSAAYAPVPLLIFLYAGFLRHRLPEFARGLAIGAGLLVVSLTFRTLDEPAC
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DAIPIGTHFMWHVLNGVMLGWMIEVYVRLMREKAEEGRA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA