Click here to switch to the map view.

The map label for this gene is 110679271

Identifier: 110679271

GI number: 110679271

Start: 1899786

End: 1900730

Strand: Reverse

Name: 110679271

Synonym: RD1_1987

Alternate gene names: NA

Gene position: 1900730-1899786 (Counterclockwise)

Preceding gene: 110679272

Following gene: 110679270

Centisome position: 45.99

GC content: 63.17

Gene sequence:

>945_bases
ATGCGACAGGCAAATCTCATACTGCGCTGGGGCGTGGCTTTGGCCGCGCTCCTTGCCGTTGCAGCTTGTGATATGCCGCT
CAGGTCCAGCGCCACCCCCAAGGCGCGCCCGGCAGGTCTGGGCCAGCCTGCGATCCAGCCAACCTCGGAAAAAAGTGCCG
CGCTGCGCAGTTATTTCGTGCAGGTACAGGCGGCGCAACTCAGGCAGGGATTGCTGCGTGAGGATGGCGGTGGGCCGGAC
ACGCCCTTTACCCCGGATATGTTGGCGCGCAACTTTGAAGACATCGTGTTTTACAACGAATATGCCAGTGCCTTGCAGGG
GCGTGGCGGGGAAAGCCCGCTGCGCAGATGGGAAGGTCCGGTGCGCATTGATACGATTTTCGGCGCAGGCGTGCCGCCCT
CCGTGCGCAAGGCGGAGGATGCGCGCATCCGTGACTATGCCCGCCGGCTGGGGCGCATCACAGCTCATCCGGTCAACACA
CTCGGCCCGAGCAATTTCATTGTGATCGTTGCCGGCGAAGATGATCGTGACGCGGCCCTGAACACGGCTGCCGCGCGCAT
CAGTGGCATCACCGCCCGGAGCCTTGACCCCTTGCGCGACCTTGGCCGCGACACCTATTGCGCGGTGGCCGCCTATGCCT
CGGGCGCGGATGCCAACACCTATACCGCCGCCGTGGCCGTGATCCGGGCCGAAAACCCGGACCTTTTGCGCCTGAGCTGC
ATCCACGAAGAGCTTGCGCAGGGGCTTGGGCTGGCCAATGACAGCCGCGATGCGCGCCCTTCGATCTTCAACGATGACGA
TGAATTCGCGCTTTTGACCGCGCATGATGAGCTGTTGCTGAAAATGCTCTACGATCCGCGCCTCAAAACCGGCATGAGCG
CCGCCGAAGCCGCGCCGATCACACGGATCATCGCACGTGAATTGACCAATTCCGGCCCCTTGTAG

Upstream 100 bases:

>100_bases
AGAAATGGAAACCACGCTGCGCGACACGCTGGCCTCCGCCAAGGCGCGCGGCGATGGCACGGGCGATACCGCCGCGACTG
CCGTTCCCCGCTAAGGCTGC

Downstream 100 bases:

>100_bases
GGCTTACAGACCAAAGGACCGAGACATATGGGTATATTTGATTTTCTCTCCGGCGAATTCATCGACGTCATCCATTGGAC
GGACAACACCCGTGACACCA

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MRQANLILRWGVALAALLAVAACDMPLRSSATPKARPAGLGQPAIQPTSEKSAALRSYFVQVQAAQLRQGLLREDGGGPD
TPFTPDMLARNFEDIVFYNEYASALQGRGGESPLRRWEGPVRIDTIFGAGVPPSVRKAEDARIRDYARRLGRITAHPVNT
LGPSNFIVIVAGEDDRDAALNTAAARISGITARSLDPLRDLGRDTYCAVAAYASGADANTYTAAVAVIRAENPDLLRLSC
IHEELAQGLGLANDSRDARPSIFNDDDEFALLTAHDELLLKMLYDPRLKTGMSAAEAAPITRIIARELTNSGPL

Sequences:

>Translated_314_residues
MRQANLILRWGVALAALLAVAACDMPLRSSATPKARPAGLGQPAIQPTSEKSAALRSYFVQVQAAQLRQGLLREDGGGPD
TPFTPDMLARNFEDIVFYNEYASALQGRGGESPLRRWEGPVRIDTIFGAGVPPSVRKAEDARIRDYARRLGRITAHPVNT
LGPSNFIVIVAGEDDRDAALNTAAARISGITARSLDPLRDLGRDTYCAVAAYASGADANTYTAAVAVIRAENPDLLRLSC
IHEELAQGLGLANDSRDARPSIFNDDDEFALLTAHDELLLKMLYDPRLKTGMSAAEAAPITRIIARELTNSGPL
>Mature_314_residues
MRQANLILRWGVALAALLAVAACDMPLRSSATPKARPAGLGQPAIQPTSEKSAALRSYFVQVQAAQLRQGLLREDGGGPD
TPFTPDMLARNFEDIVFYNEYASALQGRGGESPLRRWEGPVRIDTIFGAGVPPSVRKAEDARIRDYARRLGRITAHPVNT
LGPSNFIVIVAGEDDRDAALNTAAARISGITARSLDPLRDLGRDTYCAVAAYASGADANTYTAAVAVIRAENPDLLRLSC
IHEELAQGLGLANDSRDARPSIFNDDDEFALLTAHDELLLKMLYDPRLKTGMSAAEAAPITRIIARELTNSGPL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33748; Mature: 33748

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQANLILRWGVALAALLAVAACDMPLRSSATPKARPAGLGQPAIQPTSEKSAALRSYFV
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
QVQAAQLRQGLLREDGGGPDTPFTPDMLARNFEDIVFYNEYASALQGRGGESPLRRWEGP
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCHHHHEEHHHHHHHHHCCCCCCHHHHCCCC
VRIDTIFGAGVPPSVRKAEDARIRDYARRLGRITAHPVNTLGPSNFIVIVAGEDDRDAAL
EEEEEEECCCCCCCHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCHHHH
NTAAARISGITARSLDPLRDLGRDTYCAVAAYASGADANTYTAAVAVIRAENPDLLRLSC
HHHHHHHHCCHHHCCHHHHHCCCCHHHHHHHHCCCCCCCHHEEEEEEEECCCCCEEHHHH
IHEELAQGLGLANDSRDARPSIFNDDDEFALLTAHDELLLKMLYDPRLKTGMSAAEAAPI
HHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHCCHHHHCCCHHHHHHH
TRIIARELTNSGPL
HHHHHHHHHCCCCC
>Mature Secondary Structure
MRQANLILRWGVALAALLAVAACDMPLRSSATPKARPAGLGQPAIQPTSEKSAALRSYFV
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
QVQAAQLRQGLLREDGGGPDTPFTPDMLARNFEDIVFYNEYASALQGRGGESPLRRWEGP
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCHHHHEEHHHHHHHHHCCCCCCHHHHCCCC
VRIDTIFGAGVPPSVRKAEDARIRDYARRLGRITAHPVNTLGPSNFIVIVAGEDDRDAAL
EEEEEEECCCCCCCHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCHHHH
NTAAARISGITARSLDPLRDLGRDTYCAVAAYASGADANTYTAAVAVIRAENPDLLRLSC
HHHHHHHHCCHHHCCHHHHHCCCCHHHHHHHHCCCCCCCHHEEEEEEEECCCCCEEHHHH
IHEELAQGLGLANDSRDARPSIFNDDDEFALLTAHDELLLKMLYDPRLKTGMSAAEAAPI
HHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHCCHHHHCCCHHHHHHH
TRIIARELTNSGPL
HHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA