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The map label for this gene is 110679260

Identifier: 110679260

GI number: 110679260

Start: 1887222

End: 1888058

Strand: Reverse

Name: 110679260

Synonym: RD1_1975

Alternate gene names: NA

Gene position: 1888058-1887222 (Counterclockwise)

Preceding gene: 110679261

Following gene: 110679257

Centisome position: 45.68

GC content: 61.29

Gene sequence:

>837_bases
ATGGACGCCAAATTGCTTCTGATCATCATCGACGGGGTGCCCTATCGGAATTTCCGCAGGCTCTTTGGCAATCTTGAGGG
CTGGGTAGACAGCGGTGCTGCGCGCGTCTGGAAACACCGTTCGGTGCTGCCTTCCATCTCGGCCCCCTGCTATGCCTCCC
TTCACACAGGCGTTTCCCCGGCCGTGCACGAATGCACCGGCAACCACGCGGTTTTCCGGCTCAAACAGGCGGATCTGTTT
TCTCAGGTGCGCGCAGCGGGCGGCGTCACCGGCGCTGTCGCCCATTCCTTCTGGTCAGAGTTTTTCAACCGCGCGCCTTT
CGATCCGGTCCGCGATATCGAATATGACGAGCCGCAAAGCAGCAGTATCAACCATGGCCGATTTCATACGATGGAAGGCT
ATGGGCTGGCCAACCAGATGACCCCGTCGGATGCCGATCTGTTTGCCACGCTGACCCGGCTGTGCACGCGGTTCGATCTG
AACTACGGGATCTACCACAGCTGCACGCTCGACAGCATGGGGCACCGGTTTTTCCACGACTGTCAGGAGATGGACGACGC
CTGCGCCAAGATGGACGAGATGCTCGCGCCCTATATCATCAAATGGCGCGCGGCGGGCTATGAGGTGATCGTTACCGCGG
ATCACGGGCAGGACGCGCGCGGGCATCACGGCGGGCGCGACCCGCTGCAACAGGAAACCGCGCTCTATTACTTCGGGCAG
GCCGATGGCCCCGATCCGGATACTGTGATTGACCAGTTGCAACTGGCGCCGACGATCCTGTCGCGTCTGGGGGCGCCCAT
CGCTGCCACAATGCAGGCGCCGGTCTTTCTGACGTAA

Upstream 100 bases:

>100_bases
AAGACAAGGCCCACGCCGTCTGTCTGGCCCTGTCCCTTTTAGCGTTGCCTTGCGCCCTCAAATGGCCTCAGATGCGGCAG
CGACAGGCTGAGGGTTTGAC

Downstream 100 bases:

>100_bases
CCGCAGCCTCGCACGTTTGCCCCACCCGTTTGCCAGAACGCGCCTCAGGCTGTGGTGCTGAATTCCCACGGGCGGATAAA
CTGGCCCAGCACTGCCGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MDAKLLLIIIDGVPYRNFRRLFGNLEGWVDSGAARVWKHRSVLPSISAPCYASLHTGVSPAVHECTGNHAVFRLKQADLF
SQVRAAGGVTGAVAHSFWSEFFNRAPFDPVRDIEYDEPQSSSINHGRFHTMEGYGLANQMTPSDADLFATLTRLCTRFDL
NYGIYHSCTLDSMGHRFFHDCQEMDDACAKMDEMLAPYIIKWRAAGYEVIVTADHGQDARGHHGGRDPLQQETALYYFGQ
ADGPDPDTVIDQLQLAPTILSRLGAPIAATMQAPVFLT

Sequences:

>Translated_278_residues
MDAKLLLIIIDGVPYRNFRRLFGNLEGWVDSGAARVWKHRSVLPSISAPCYASLHTGVSPAVHECTGNHAVFRLKQADLF
SQVRAAGGVTGAVAHSFWSEFFNRAPFDPVRDIEYDEPQSSSINHGRFHTMEGYGLANQMTPSDADLFATLTRLCTRFDL
NYGIYHSCTLDSMGHRFFHDCQEMDDACAKMDEMLAPYIIKWRAAGYEVIVTADHGQDARGHHGGRDPLQQETALYYFGQ
ADGPDPDTVIDQLQLAPTILSRLGAPIAATMQAPVFLT
>Mature_278_residues
MDAKLLLIIIDGVPYRNFRRLFGNLEGWVDSGAARVWKHRSVLPSISAPCYASLHTGVSPAVHECTGNHAVFRLKQADLF
SQVRAAGGVTGAVAHSFWSEFFNRAPFDPVRDIEYDEPQSSSINHGRFHTMEGYGLANQMTPSDADLFATLTRLCTRFDL
NYGIYHSCTLDSMGHRFFHDCQEMDDACAKMDEMLAPYIIKWRAAGYEVIVTADHGQDARGHHGGRDPLQQETALYYFGQ
ADGPDPDTVIDQLQLAPTILSRLGAPIAATMQAPVFLT

Specific function: Unknown

COG id: COG1524

COG function: function code R; Uncharacterized proteins of the AP superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30824; Mature: 30824

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAKLLLIIIDGVPYRNFRRLFGNLEGWVDSGAARVWKHRSVLPSISAPCYASLHTGVSP
CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCH
AVHECTGNHAVFRLKQADLFSQVRAAGGVTGAVAHSFWSEFFNRAPFDPVRDIEYDEPQS
HHHHCCCCCEEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
SSINHGRFHTMEGYGLANQMTPSDADLFATLTRLCTRFDLNYGIYHSCTLDSMGHRFFHD
CCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHH
CQEMDDACAKMDEMLAPYIIKWRAAGYEVIVTADHGQDARGHHGGRDPLQQETALYYFGQ
HHHHHHHHHHHHHHHHHHHEEEECCCEEEEEEECCCCCCCCCCCCCCCHHHCCEEEEEEC
ADGPDPDTVIDQLQLAPTILSRLGAPIAATMQAPVFLT
CCCCCHHHHHHHHHHHHHHHHHCCCCEEHHCCCCEEEC
>Mature Secondary Structure
MDAKLLLIIIDGVPYRNFRRLFGNLEGWVDSGAARVWKHRSVLPSISAPCYASLHTGVSP
CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCH
AVHECTGNHAVFRLKQADLFSQVRAAGGVTGAVAHSFWSEFFNRAPFDPVRDIEYDEPQS
HHHHCCCCCEEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
SSINHGRFHTMEGYGLANQMTPSDADLFATLTRLCTRFDLNYGIYHSCTLDSMGHRFFHD
CCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHH
CQEMDDACAKMDEMLAPYIIKWRAAGYEVIVTADHGQDARGHHGGRDPLQQETALYYFGQ
HHHHHHHHHHHHHHHHHHHEEEECCCEEEEEEECCCCCCCCCCCCCCCHHHCCEEEEEEC
ADGPDPDTVIDQLQLAPTILSRLGAPIAATMQAPVFLT
CCCCCHHHHHHHHHHHHHHHHHCCCCEEHHCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA