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The map label for this gene is 110679255

Identifier: 110679255

GI number: 110679255

Start: 1881302

End: 1881568

Strand: Direct

Name: 110679255

Synonym: RD1_1968

Alternate gene names: NA

Gene position: 1881302-1881568 (Clockwise)

Preceding gene: 110679252

Following gene: 110679256

Centisome position: 45.52

GC content: 54.31

Gene sequence:

>267_bases
ATGATAACCATGGCATTGGGACGGATCCCCTGGCAGTCTCAGACATCCGGCGTCATTGATGCGGACAGTCTGGAATTCTT
ACGCCAGGTCGCGGCCCTGGTGCCGGGTATCATCTATGTGTTCAATCACGAGACGATGAGCAACGAATATACCAACCGCT
GCATCGCGGAGTTGCTTGGGTACTCGCCGGCGGACATCAAGGCGATGGGCGATGATCTGTTACCCACCATCATACATGAT
GATGATTTTGACCGCATCGCCGGATGA

Upstream 100 bases:

>100_bases
ATCTGTGGATGCGTCACGAGTGGAGGCGGGGTTTAACCCGCTATTTACCGGCGCGGTGTCATTGTTAACGCAGCGTTTGG
CAAGGCGGGGATGATAGAGG

Downstream 100 bases:

>100_bases
TGATTTTGACCGCATCGCCGGCCATGTGGCCGAATTGCAGCACCTCGCCGATCATGAGCAGGCGGTTTGGGAATATCGCG
CCATCGCGCGCGATGGACAC

Product: sensory box protein, putative

Products: NA

Alternate protein names: Two-Component System Sensor Histidine Kinase

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MITMALGRIPWQSQTSGVIDADSLEFLRQVAALVPGIIYVFNHETMSNEYTNRCIAELLGYSPADIKAMGDDLLPTIIHD
DDFDRIAG

Sequences:

>Translated_88_residues
MITMALGRIPWQSQTSGVIDADSLEFLRQVAALVPGIIYVFNHETMSNEYTNRCIAELLGYSPADIKAMGDDLLPTIIHD
DDFDRIAG
>Mature_88_residues
MITMALGRIPWQSQTSGVIDADSLEFLRQVAALVPGIIYVFNHETMSNEYTNRCIAELLGYSPADIKAMGDDLLPTIIHD
DDFDRIAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9743; Mature: 9743

Theoretical pI: Translated: 4.06; Mature: 4.06

Prosite motif: PS50112 PAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITMALGRIPWQSQTSGVIDADSLEFLRQVAALVPGIIYVFNHETMSNEYTNRCIAELLG
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCHHCHHHHHHHHHHHHC
YSPADIKAMGDDLLPTIIHDDDFDRIAG
CCCCCHHHCCCCCCHHHCCCCCHHHCCC
>Mature Secondary Structure
MITMALGRIPWQSQTSGVIDADSLEFLRQVAALVPGIIYVFNHETMSNEYTNRCIAELLG
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCHHCHHHHHHHHHHHHC
YSPADIKAMGDDLLPTIIHDDDFDRIAG
CCCCCHHHCCCCCCHHHCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA