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The map label for this gene is 110679175

Identifier: 110679175

GI number: 110679175

Start: 1800579

End: 1801334

Strand: Direct

Name: 110679175

Synonym: RD1_1885

Alternate gene names: NA

Gene position: 1800579-1801334 (Clockwise)

Preceding gene: 110679174

Following gene: 110679176

Centisome position: 43.56

GC content: 58.86

Gene sequence:

>756_bases
ATGTCTGCACTGAAATACTTCGATAGCCACCGTGGACGCAGGCTTGCGTTCCATCTTACCGCGGGCACTGGTCCCACGAT
TGTTTTTCTTGGTGGGCTGAAGTCCGATATGGACGGCACCAAGGCGCTCCATCTCGAGGCATGGGCACAGCAACACGGCA
AAGCATTCCTCAGGTTTGACTACTCTGGCCACGGTCTCTCTTCCGGCACTTTTGAGGAAGGCTGCATCGGCGACTGGGCC
GACGACACATTCGACATCCTGAACACGCTGATATCGGGGCCGATCCTGCCTGTTGGTTCGTCCATGGGCGGCTGGCAGGC
GTTGCTGTTGTCCCGGCGGATGTCGGATCGCATGATCGGGATGGTGACAATCGCGGCTGCCCCGGATTTTACCGAAGACG
GGTATTGGGCTTCTTTCAGCGATGCGCAAAAAGCGCAGATCGAAGCAGAGGGGCAGGTCGAGATACCTTCTGATTATATG
GAACCCTACATCATCACGCGCCGCATGATCGAAGATGGCAGGCAGCACTTGGTGCTGCGCACGCCCCTGCCGCTGGAGTT
TCCGGTCAGATGCCTGCAAGGCACCGCCGATACAGCTGTGAGCACACAGACCGCGGTGCGGTTGCTCGAGCACGCCAAAA
GCCCGGATATGCGCCTGCTGCTTGTGAAAGACGCGGATCACCGATTCTCCGATGGGCCCTGTCTTGGCCTGATTGAAGCG
GCGGTCGAAGAGATCCTCGCACTCGCCGCGTCATGA

Upstream 100 bases:

>100_bases
TCGAGAAGTTGGACAAGCGGGTTTTTGTCGGATTTGTGAGTGACTTAGGGATTGTACGTCCCACCACGTTCAGCGCATCA
TCGCACCCAAAGAGGTTGTG

Downstream 100 bases:

>100_bases
GCGCATGGGCGATGTCTCGCGCAGGGAGCCCGCCGCGACAGGGCGTGGCACTTGTGATTTTGGCCCATGCGAGTCACAAC
TGCGCAAACACTGCTTTCCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 251; Mature: 250

Protein sequence:

>251_residues
MSALKYFDSHRGRRLAFHLTAGTGPTIVFLGGLKSDMDGTKALHLEAWAQQHGKAFLRFDYSGHGLSSGTFEEGCIGDWA
DDTFDILNTLISGPILPVGSSMGGWQALLLSRRMSDRMIGMVTIAAAPDFTEDGYWASFSDAQKAQIEAEGQVEIPSDYM
EPYIITRRMIEDGRQHLVLRTPLPLEFPVRCLQGTADTAVSTQTAVRLLEHAKSPDMRLLLVKDADHRFSDGPCLGLIEA
AVEEILALAAS

Sequences:

>Translated_251_residues
MSALKYFDSHRGRRLAFHLTAGTGPTIVFLGGLKSDMDGTKALHLEAWAQQHGKAFLRFDYSGHGLSSGTFEEGCIGDWA
DDTFDILNTLISGPILPVGSSMGGWQALLLSRRMSDRMIGMVTIAAAPDFTEDGYWASFSDAQKAQIEAEGQVEIPSDYM
EPYIITRRMIEDGRQHLVLRTPLPLEFPVRCLQGTADTAVSTQTAVRLLEHAKSPDMRLLLVKDADHRFSDGPCLGLIEA
AVEEILALAAS
>Mature_250_residues
SALKYFDSHRGRRLAFHLTAGTGPTIVFLGGLKSDMDGTKALHLEAWAQQHGKAFLRFDYSGHGLSSGTFEEGCIGDWAD
DTFDILNTLISGPILPVGSSMGGWQALLLSRRMSDRMIGMVTIAAAPDFTEDGYWASFSDAQKAQIEAEGQVEIPSDYME
PYIITRRMIEDGRQHLVLRTPLPLEFPVRCLQGTADTAVSTQTAVRLLEHAKSPDMRLLLVKDADHRFSDGPCLGLIEAA
VEEILALAAS

Specific function: Unknown

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI8923001, Length=247, Percent_Identity=30.7692307692308, Blast_Score=138, Evalue=6e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27457; Mature: 27325

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSALKYFDSHRGRRLAFHLTAGTGPTIVFLGGLKSDMDGTKALHLEAWAQQHGKAFLRFD
CCHHHHHHCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCEEEHHHHHHHHCCCEEEEEE
YSGHGLSSGTFEEGCIGDWADDTFDILNTLISGPILPVGSSMGGWQALLLSRRMSDRMIG
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHCCEEE
MVTIAAAPDFTEDGYWASFSDAQKAQIEAEGQVEIPSDYMEPYIITRRMIEDGRQHLVLR
EEEEEECCCCCCCCCEECCCCCCHHEECCCCCEECCHHHHHHHHHHHHHHHCCCCEEEEE
TPLPLEFPVRCLQGTADTAVSTQTAVRLLEHAKSPDMRLLLVKDADHRFSDGPCLGLIEA
CCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHH
AVEEILALAAS
HHHHHHHHHCC
>Mature Secondary Structure 
SALKYFDSHRGRRLAFHLTAGTGPTIVFLGGLKSDMDGTKALHLEAWAQQHGKAFLRFD
CHHHHHHCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCEEEHHHHHHHHCCCEEEEEE
YSGHGLSSGTFEEGCIGDWADDTFDILNTLISGPILPVGSSMGGWQALLLSRRMSDRMIG
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHCCEEE
MVTIAAAPDFTEDGYWASFSDAQKAQIEAEGQVEIPSDYMEPYIITRRMIEDGRQHLVLR
EEEEEECCCCCCCCCEECCCCCCHHEECCCCCEECCHHHHHHHHHHHHHHHCCCCEEEEE
TPLPLEFPVRCLQGTADTAVSTQTAVRLLEHAKSPDMRLLLVKDADHRFSDGPCLGLIEA
CCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHH
AVEEILALAAS
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA