| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
Click here to switch to the map view.
The map label for this gene is 110679144
Identifier: 110679144
GI number: 110679144
Start: 1776600
End: 1776698
Strand: Direct
Name: 110679144
Synonym: RD1_1854
Alternate gene names: NA
Gene position: 1776600-1776698 (Clockwise)
Preceding gene: 162139374
Following gene: 110679146
Centisome position: 42.98
GC content: 52.53
Gene sequence:
>99_bases GTGTCAAATTGGATTTCAGGCGGCGCCAAGGTCGATGCTGCCAGTGATTTAACCCTGTCACTCCGAAGTGTCGTGCAAAA CGGCGGCTTTGACGTTTGA
Upstream 100 bases:
>100_bases GGCTTAACCGAGCGATTGGGGAGGCACCAAAAGCTGGGCAGATCCATAATGGCGATGGGGCAATGGCAATGACGACACTG CAACAGTATTTCTTGCAAAG
Downstream 100 bases:
>100_bases GCGCGTAGTCGCAACCGCCATCGTGGTTCAACCGGCGTTCATGTCGTTGGACTCACGGACCTCTGCGATCGTGGTGGCGG AAAGCCTTTCTACAAGGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 32; Mature: 31
Protein sequence:
>32_residues MSNWISGGAKVDAASDLTLSLRSVVQNGGFDV
Sequences:
>Translated_32_residues MSNWISGGAKVDAASDLTLSLRSVVQNGGFDV >Mature_31_residues SNWISGGAKVDAASDLTLSLRSVVQNGGFDV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 3296; Mature: 3164
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNWISGGAKVDAASDLTLSLRSVVQNGGFDV CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC >Mature Secondary Structure SNWISGGAKVDAASDLTLSLRSVVQNGGFDV CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA