Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is 110679137

Identifier: 110679137

GI number: 110679137

Start: 1768711

End: 1768929

Strand: Direct

Name: 110679137

Synonym: RD1_1843

Alternate gene names: NA

Gene position: 1768711-1768929 (Clockwise)

Preceding gene: 110679136

Following gene: 110679141

Centisome position: 42.79

GC content: 61.64

Gene sequence:

>219_bases
GTGGTCTTCCTGCCATATCAGCATGTGCTGCGAAGTCAGTCCGGTGCCGTTGGCTGGGACCGCGATGCAGGGGCAGCCGC
CCAGTTCACGAATTTGATCACCTTCAGCACATGGAAACGTCGACTATCCTTTGGCGCGCCTGACATCACATTGCGCAACC
ACCGCTGGCTTGGCGCCTGCGGGATCGCCATGGGGGTACCAGCGCCCAGTACGCGCTAG

Upstream 100 bases:

>100_bases
CTTGCGGCGGAACCTGTCGACATCGTGAGAAAACGATCCGTCTTGATGTGCGCGGCGCCGGAAGCCTTTTACCTCATACA
TTGCAGGTCCGGCCGACCGT

Downstream 100 bases:

>100_bases
CATCCGCCCCTTTTAGCGCTTTGTCATGGTGGAGCCTGCAGAGTTTCTTCCAGCTCATTTCTCCGGTGAAGTCGGCTTGG
TTCAGTTTTTTACATGTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 72; Mature: 72

Protein sequence:

>72_residues
MVFLPYQHVLRSQSGAVGWDRDAGAAAQFTNLITFSTWKRRLSFGAPDITLRNHRWLGACGIAMGVPAPSTR

Sequences:

>Translated_72_residues
MVFLPYQHVLRSQSGAVGWDRDAGAAAQFTNLITFSTWKRRLSFGAPDITLRNHRWLGACGIAMGVPAPSTR
>Mature_72_residues
MVFLPYQHVLRSQSGAVGWDRDAGAAAQFTNLITFSTWKRRLSFGAPDITLRNHRWLGACGIAMGVPAPSTR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7931; Mature: 7931

Theoretical pI: Translated: 11.78; Mature: 11.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFLPYQHVLRSQSGAVGWDRDAGAAAQFTNLITFSTWKRRLSFGAPDITLRNHRWLGAC
CEECCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCEEEEC
GIAMGVPAPSTR
CEECCCCCCCCC
>Mature Secondary Structure
MVFLPYQHVLRSQSGAVGWDRDAGAAAQFTNLITFSTWKRRLSFGAPDITLRNHRWLGAC
CEECCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCEEEEC
GIAMGVPAPSTR
CEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA