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The map label for this gene is aspC [H]

Identifier: 110679130

GI number: 110679130

Start: 1760923

End: 1762056

Strand: Direct

Name: aspC [H]

Synonym: RD1_1835

Alternate gene names: 110679130

Gene position: 1760923-1762056 (Clockwise)

Preceding gene: 110679128

Following gene: 110679132

Centisome position: 42.61

GC content: 60.32

Gene sequence:

>1134_bases
ATGCCCAGTTTGCCCGATTTCCGCCTTGAGACCCATTTCGCCAAATGGGAGTTTACCGCGCAGTACCATCTGACGGCTTC
GGATGCGGAAAGCATTTCTTTGCGTGACCTTCTTGCCATGGCCTCGGATGAGGACCGCGTGGCATTCGAAGAGATGTGGC
TTGGGTACACGGAGACCTTTGGCGCGCCGGACCTGCGCGCGCGGATTGCGCAGACTTATGCAGGGCAGGGAGCGGACAAC
ATCCTGTGTTTTGCCGGGGCCAGTGAGGGAATTTTTGCGGCCAATTCGGTCCTGCTGGACAAGGACAGCCATGCCATCGT
CGTGACCCCGAACTATCAGTCCCACGAGACGCTGCCGGTTACGATCTGCAGTGCCACGGGCGTCCCGCTTGACCCGGATG
ATGGCTGGTCCCTCGATATCGACCGGGTGGCCGCTGCCATCCGACCCAACACCCGGCTTTTGACGATGAATTTTCCGCAT
AACCCGACGGGGGCGATCCTGTCGCGCGACCGTTATGACGCATTGATCGCGCTGTGTCGCAAGCATGGCATCTATATTCT
GCATGATGAGATCTTTCATGGGCTGGGCCCCAGCGGGACGCAGTTCTTGCCCTTTGTCGCGGATGTCTACGAACGCGGGC
TGTCGCTGAATGTGATGTCCAAATCCTATGGCCTGCCGGGGTTGCGGATCGGCTGGATTGCTGCGAAGGACCGCGATGTG
CTGGCGCGGATGGAGCGTCTGAAACACTATCTTTCCATCTGCAACTCGGGTCCCAGTGAAAGGCTTGCGATGATTGCGCT
TGCGAACCGGCGCGCGTTGCTGGCGCGCAACTGCGCGATTGTCGACGAAAACCTGCCGAAGTGGGATGCGTTTTTTGCGC
GCTACCCCGATCTGTTTGACTGGCAGCACCCGGATGGGTCCTGCATGGCATACCCGCGCTACAAAGGTGCAGAGGGCGTG
GACAGTTTCGCGCGAAACCTCGTGGAGCAGAGCGGCGTGCTCGTGTTGCCAAGCGCGATCTACGCATCTGATGTCGGCCC
CGTGCCGCAGGACCGCTTTCGCATCGGGCTGGGTCGCCGCGGGCTGGACGAAGGGCTGGCGGCGTTCGAGGCATATCTGA
ACCGAAATGCGTAA

Upstream 100 bases:

>100_bases
AAAACGACCCCATCCACGGCTTCGTGAAATCAAGGATTTCAACGCGTTAAGCGATATGCGACGGTTGCGGCACTTCGCCA
GACGCTACACAGGACGTCCC

Downstream 100 bases:

>100_bases
TCCAACACATCCGCCGCAGGCGGTAGCGGGCATGCTTCAACCATCCTGCGCCCAGATTTCCATCAGTGTCCGGGCGGTTT
CGACTGTTTTGTCGGCGTAG

Product: aminotransferase, putative

Products: NA

Alternate protein names: AspAT; Transaminase A [H]

Number of amino acids: Translated: 377; Mature: 376

Protein sequence:

>377_residues
MPSLPDFRLETHFAKWEFTAQYHLTASDAESISLRDLLAMASDEDRVAFEEMWLGYTETFGAPDLRARIAQTYAGQGADN
ILCFAGASEGIFAANSVLLDKDSHAIVVTPNYQSHETLPVTICSATGVPLDPDDGWSLDIDRVAAAIRPNTRLLTMNFPH
NPTGAILSRDRYDALIALCRKHGIYILHDEIFHGLGPSGTQFLPFVADVYERGLSLNVMSKSYGLPGLRIGWIAAKDRDV
LARMERLKHYLSICNSGPSERLAMIALANRRALLARNCAIVDENLPKWDAFFARYPDLFDWQHPDGSCMAYPRYKGAEGV
DSFARNLVEQSGVLVLPSAIYASDVGPVPQDRFRIGLGRRGLDEGLAAFEAYLNRNA

Sequences:

>Translated_377_residues
MPSLPDFRLETHFAKWEFTAQYHLTASDAESISLRDLLAMASDEDRVAFEEMWLGYTETFGAPDLRARIAQTYAGQGADN
ILCFAGASEGIFAANSVLLDKDSHAIVVTPNYQSHETLPVTICSATGVPLDPDDGWSLDIDRVAAAIRPNTRLLTMNFPH
NPTGAILSRDRYDALIALCRKHGIYILHDEIFHGLGPSGTQFLPFVADVYERGLSLNVMSKSYGLPGLRIGWIAAKDRDV
LARMERLKHYLSICNSGPSERLAMIALANRRALLARNCAIVDENLPKWDAFFARYPDLFDWQHPDGSCMAYPRYKGAEGV
DSFARNLVEQSGVLVLPSAIYASDVGPVPQDRFRIGLGRRGLDEGLAAFEAYLNRNA
>Mature_376_residues
PSLPDFRLETHFAKWEFTAQYHLTASDAESISLRDLLAMASDEDRVAFEEMWLGYTETFGAPDLRARIAQTYAGQGADNI
LCFAGASEGIFAANSVLLDKDSHAIVVTPNYQSHETLPVTICSATGVPLDPDDGWSLDIDRVAAAIRPNTRLLTMNFPHN
PTGAILSRDRYDALIALCRKHGIYILHDEIFHGLGPSGTQFLPFVADVYERGLSLNVMSKSYGLPGLRIGWIAAKDRDVL
ARMERLKHYLSICNSGPSERLAMIALANRRALLARNCAIVDENLPKWDAFFARYPDLFDWQHPDGSCMAYPRYKGAEGVD
SFARNLVEQSGVLVLPSAIYASDVGPVPQDRFRIGLGRRGLDEGLAAFEAYLNRNA

Specific function: Unknown

COG id: COG0436

COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI95147551, Length=259, Percent_Identity=24.7104247104247, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI169881279, Length=259, Percent_Identity=24.7104247104247, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI56713256, Length=227, Percent_Identity=25.5506607929515, Blast_Score=79, Evalue=7e-15,
Organism=Homo sapiens, GI56713254, Length=196, Percent_Identity=27.5510204081633, Blast_Score=79, Evalue=8e-15,
Organism=Homo sapiens, GI4507369, Length=190, Percent_Identity=26.3157894736842, Blast_Score=72, Evalue=7e-13,
Organism=Homo sapiens, GI169881281, Length=207, Percent_Identity=23.1884057971014, Blast_Score=72, Evalue=7e-13,
Organism=Escherichia coli, GI1788627, Length=233, Percent_Identity=27.0386266094421, Blast_Score=79, Evalue=6e-16,
Organism=Escherichia coli, GI1786816, Length=320, Percent_Identity=24.375, Blast_Score=79, Evalue=7e-16,
Organism=Escherichia coli, GI1788722, Length=300, Percent_Identity=22.3333333333333, Blast_Score=66, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17567369, Length=192, Percent_Identity=22.9166666666667, Blast_Score=76, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI71994476, Length=222, Percent_Identity=22.5225225225225, Blast_Score=73, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI71994472, Length=220, Percent_Identity=21.8181818181818, Blast_Score=73, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17567663, Length=344, Percent_Identity=21.8023255813953, Blast_Score=71, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6322401, Length=224, Percent_Identity=26.3392857142857, Blast_Score=90, Evalue=7e-19,
Organism=Drosophila melanogaster, GI18859735, Length=199, Percent_Identity=28.643216080402, Blast_Score=76, Evalue=4e-14,
Organism=Drosophila melanogaster, GI28573069, Length=197, Percent_Identity=23.8578680203046, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24646114, Length=197, Percent_Identity=23.8578680203046, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI28573067, Length=197, Percent_Identity=23.8578680203046, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI28573065, Length=197, Percent_Identity=23.8578680203046, Blast_Score=74, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001176
- InterPro:   IPR004839
- InterPro:   IPR004838
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: =2.6.1.1 [H]

Molecular weight: Translated: 41729; Mature: 41598

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSLPDFRLETHFAKWEFTAQYHLTASDAESISLRDLLAMASDEDRVAFEEMWLGYTETF
CCCCCCCCEEEEEEEEEEEEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHCCHHHCC
GAPDLRARIAQTYAGQGADNILCFAGASEGIFAANSVLLDKDSHAIVVTPNYQSHETLPV
CCCHHHHHHHHHHCCCCCCCEEEEECCCCCEEEECEEEEECCCCEEEECCCCCCCCCEEE
TICSATGVPLDPDDGWSLDIDRVAAAIRPNTRLLTMNFPHNPTGAILSRDRYDALIALCR
EEEECCCCCCCCCCCCEEEHHHHHHHCCCCCEEEEEECCCCCCCHHEECHHHHHHHHHHH
KHGIYILHDEIFHGLGPSGTQFLPFVADVYERGLSLNVMSKSYGLPGLRIGWIAAKDRDV
HCCEEEEEHHHHHCCCCCCCCHHHHHHHHHHCCCEEEEEHHCCCCCCEEEEEEECCCHHH
LARMERLKHYLSICNSGPSERLAMIALANRRALLARNCAIVDENLPKWDAFFARYPDLFD
HHHHHHHHHHHHHHCCCCHHHEEEEEECCCCEEHHCCCEEECCCCCHHHHHHHHCCCCCC
WQHPDGSCMAYPRYKGAEGVDSFARNLVEQSGVLVLPSAIYASDVGPVPQDRFRIGLGRR
CCCCCCCEEECCCCCCCCCHHHHHHHHHHHCCEEEEECHHHHCCCCCCCHHHEEECCCCC
GLDEGLAAFEAYLNRNA
CHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PSLPDFRLETHFAKWEFTAQYHLTASDAESISLRDLLAMASDEDRVAFEEMWLGYTETF
CCCCCCCEEEEEEEEEEEEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHCCHHHCC
GAPDLRARIAQTYAGQGADNILCFAGASEGIFAANSVLLDKDSHAIVVTPNYQSHETLPV
CCCHHHHHHHHHHCCCCCCCEEEEECCCCCEEEECEEEEECCCCEEEECCCCCCCCCEEE
TICSATGVPLDPDDGWSLDIDRVAAAIRPNTRLLTMNFPHNPTGAILSRDRYDALIALCR
EEEECCCCCCCCCCCCEEEHHHHHHHCCCCCEEEEEECCCCCCCHHEECHHHHHHHHHHH
KHGIYILHDEIFHGLGPSGTQFLPFVADVYERGLSLNVMSKSYGLPGLRIGWIAAKDRDV
HCCEEEEEHHHHHCCCCCCCCHHHHHHHHHHCCCEEEEEHHCCCCCCEEEEEEECCCHHH
LARMERLKHYLSICNSGPSERLAMIALANRRALLARNCAIVDENLPKWDAFFARYPDLFD
HHHHHHHHHHHHHHCCCCHHHEEEEEECCCCEEHHCCCEEECCCCCHHHHHHHHCCCCCC
WQHPDGSCMAYPRYKGAEGVDSFARNLVEQSGVLVLPSAIYASDVGPVPQDRFRIGLGRR
CCCCCCCEEECCCCCCCCCHHHHHHHHHHHCCEEEEECHHHHCCCCCCCHHHEEECCCCC
GLDEGLAAFEAYLNRNA
CHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]