Click here to switch to the map view.

The map label for this gene is 110679127

Identifier: 110679127

GI number: 110679127

Start: 1756295

End: 1756684

Strand: Direct

Name: 110679127

Synonym: RD1_1831

Alternate gene names: NA

Gene position: 1756295-1756684 (Clockwise)

Preceding gene: 110679125

Following gene: 110679128

Centisome position: 42.49

GC content: 64.1

Gene sequence:

>390_bases
TTGACCTTGCGCAGATTGATCGCGTTGCGCACGGTCGCTTCCTTGCTGGCCGAAGCGCTGGAGGGTATCTTTGGGGCGAC
CACGCGGGGCGCGACACTGGCGGCCGAGGCGGTTGTGACCGCCGAAGCTCTGGGTGCAGGCGTTGCGCTCTGGATTTTTG
CAACGGTAGCACTGAAATCCCTTGGCCGGACATCCGGTCGCAACGACGCGGCGACTGCCCGTGCGGTGGCGCCGTCAAAA
TCTTCGGTGGATTGCTGTGTGATCAGGGCCTGCCCACCCGCATTGTCCAGCGACACGAGACTTGCGGCGGCCAGTGCGTT
CTCCTGTGCGGACTGGGGCCGCAGCTGTGGTCTGTATTCTCCGAGTTCCTCGCGTGTCAGGCCGCTATAG

Upstream 100 bases:

>100_bases
ACCGTCGATGCTGTCCCCGACCTCAACCTTGCGATAGCGGCCATTGCTGAGCCGCACCAGCGCGCGTCTGCTGGAGGGTT
TGCCATAGACACCGATCAGG

Downstream 100 bases:

>100_bases
GTCGCGCGTTCCGTCGTTTCGATCAGATCCGTGGGGCGGACCTGTGGGCGGAAACTGGCCAGTCGCAACCGTGTTGCGAG
GTCCTCGCCGGGGTCTTCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 128

Protein sequence:

>129_residues
MTLRRLIALRTVASLLAEALEGIFGATTRGATLAAEAVVTAEALGAGVALWIFATVALKSLGRTSGRNDAATARAVAPSK
SSVDCCVIRACPPALSSDTRLAAASAFSCADWGRSCGLYSPSSSRVRPL

Sequences:

>Translated_129_residues
MTLRRLIALRTVASLLAEALEGIFGATTRGATLAAEAVVTAEALGAGVALWIFATVALKSLGRTSGRNDAATARAVAPSK
SSVDCCVIRACPPALSSDTRLAAASAFSCADWGRSCGLYSPSSSRVRPL
>Mature_128_residues
TLRRLIALRTVASLLAEALEGIFGATTRGATLAAEAVVTAEALGAGVALWIFATVALKSLGRTSGRNDAATARAVAPSKS
SVDCCVIRACPPALSSDTRLAAASAFSCADWGRSCGLYSPSSSRVRPL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13141; Mature: 13010

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLRRLIALRTVASLLAEALEGIFGATTRGATLAAEAVVTAEALGAGVALWIFATVALKS
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
LGRTSGRNDAATARAVAPSKSSVDCCVIRACPPALSSDTRLAAASAFSCADWGRSCGLYS
HCCCCCCCCCHHHHHCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC
PSSSRVRPL
CCCCCCCCC
>Mature Secondary Structure 
TLRRLIALRTVASLLAEALEGIFGATTRGATLAAEAVVTAEALGAGVALWIFATVALKS
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
LGRTSGRNDAATARAVAPSKSSVDCCVIRACPPALSSDTRLAAASAFSCADWGRSCGLYS
HCCCCCCCCCHHHHHCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC
PSSSRVRPL
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA