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The map label for this gene is nrdR [H]

Identifier: 110679095

GI number: 110679095

Start: 1728225

End: 1728692

Strand: Direct

Name: nrdR [H]

Synonym: RD1_1798

Alternate gene names: 110679095

Gene position: 1728225-1728692 (Clockwise)

Preceding gene: 110679094

Following gene: 110679096

Centisome position: 41.81

GC content: 55.77

Gene sequence:

>468_bases
ATGCGCTGCCCGTTTTGCGGAAATATTGACACTCAGGTTAAAGACAGCCGTCCGGCGGAGGACCATGTCTCCATCAGGCG
ACGCCGGTTTTGCCCGGCCTGTGGGGGGCGGTTTACGACCTATGAACGTGTGCAGCTGCGCGATCTGGTTGTGATCAAAT
CCACCGGCAAACGAGAAGATTTTGATCGCGACAAGCTGGAGCGCTCCATCCGCATATCCATGCAGAAACGACCCATTGAT
CCCGAACGGATCGACCAGATGATATCGGGCATTGTGCGCCGGTTGGAAAGCATGGGCGAAACCGACATCGGCTCCAAACA
GATCGGTGAGATCGTGATGGAAGCGCTCGCGCGGATCGACACCGTTGCCTATGTGCGTTTTGCCAGTGTGTACAAGAACT
TTCAGGCCGCAGATGATTTTGACAAGTTTGTCAGTGAATTGCGCCCGGACGTTCCCGGCGACGAGTGA

Upstream 100 bases:

>100_bases
TTCGCCTCTACCCAAAACTTAGGCGTTCGCCTATACTTGTGGATAAGTGGGGCGGCGATCCCACAACAAGAGGCAGAGAC
TGGAATAAGGGGGACGGCCG

Downstream 100 bases:

>100_bases
CCGAGGCGTCCCGCTACATGGCGCTGGCCCTGTCGTTGGGGCGGCGGGGCTTTGGTCGTGTATGGCCGAACCCGGCCGTG
GGCTGCGTGATTGTCAAAGA

Product: transcriptional regulator NrdR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MRCPFCGNIDTQVKDSRPAEDHVSIRRRRFCPACGGRFTTYERVQLRDLVVIKSTGKREDFDRDKLERSIRISMQKRPID
PERIDQMISGIVRRLESMGETDIGSKQIGEIVMEALARIDTVAYVRFASVYKNFQAADDFDKFVSELRPDVPGDE

Sequences:

>Translated_155_residues
MRCPFCGNIDTQVKDSRPAEDHVSIRRRRFCPACGGRFTTYERVQLRDLVVIKSTGKREDFDRDKLERSIRISMQKRPID
PERIDQMISGIVRRLESMGETDIGSKQIGEIVMEALARIDTVAYVRFASVYKNFQAADDFDKFVSELRPDVPGDE
>Mature_155_residues
MRCPFCGNIDTQVKDSRPAEDHVSIRRRRFCPACGGRFTTYERVQLRDLVVIKSTGKREDFDRDKLERSIRISMQKRPID
PERIDQMISGIVRRLESMGETDIGSKQIGEIVMEALARIDTVAYVRFASVYKNFQAADDFDKFVSELRPDVPGDE

Specific function: Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes [H]

COG id: COG1327

COG function: function code K; Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-cone domain [H]

Homologues:

Organism=Escherichia coli, GI1786615, Length=147, Percent_Identity=41.4965986394558, Blast_Score=122, Evalue=9e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005144
- InterPro:   IPR003796 [H]

Pfam domain/function: PF03477 ATP-cone [H]

EC number: NA

Molecular weight: Translated: 17878; Mature: 17878

Theoretical pI: Translated: 7.92; Mature: 7.92

Prosite motif: PS51161 ATP_CONE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRCPFCGNIDTQVKDSRPAEDHVSIRRRRFCPACGGRFTTYERVQLRDLVVIKSTGKRED
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHEEECCCCCCCC
FDRDKLERSIRISMQKRPIDPERIDQMISGIVRRLESMGETDIGSKQIGEIVMEALARID
CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
TVAYVRFASVYKNFQAADDFDKFVSELRPDVPGDE
HHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MRCPFCGNIDTQVKDSRPAEDHVSIRRRRFCPACGGRFTTYERVQLRDLVVIKSTGKRED
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHEEECCCCCCCC
FDRDKLERSIRISMQKRPIDPERIDQMISGIVRRLESMGETDIGSKQIGEIVMEALARID
CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
TVAYVRFASVYKNFQAADDFDKFVSELRPDVPGDE
HHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA