Click here to switch to the map view.

The map label for this gene is 110679093

Identifier: 110679093

GI number: 110679093

Start: 1727218

End: 1727634

Strand: Direct

Name: 110679093

Synonym: RD1_1796

Alternate gene names: NA

Gene position: 1727218-1727634 (Clockwise)

Preceding gene: 110679092

Following gene: 110679094

Centisome position: 41.79

GC content: 55.88

Gene sequence:

>417_bases
ATGCCCCGGGCTTTGATCACTGCGCTATGCTGTGTTGCTTTGGCATTGCCGGCTGCGGCGCAACCATACCGCGCGGTGAA
TTGGCTGTATGTTGTCCCGATCAGCCAAGACAGCTTTGAGGTTCTGGATGACCGGTGGTCCAGCGCAAAGGATTTCTGGT
GCGCGGCGGCGGATTACGCCCGCGCATCGGGTCTCGATGGGGTGCGTAAGCGGCTGTATATCGTTGATCCGCTGGGTGCT
TCAAAAACAACGGACGGTGTCAAAGGCGTGGTGTTTACGGTCACCCCGGATGATGCGATGAAAAACACGCCCTCTTCCTA
CTCGGTCTCGGTGAAACGACGCAACGAGAACCTTGCAATCGGTCACGCGTATAACTTTTGCGATAACCTGCTGGAAGAAG
TATTCGGCGGATTTTGA

Upstream 100 bases:

>100_bases
AGGGAGATCGAATTTTCCGTTCCTGAAGGGCTGCAAATGTCTGGTATTTGCAAGGCGAGCCTGTAAGCTAAATGCAGGAA
TTGAAACGGGTTGGATCATG

Downstream 100 bases:

>100_bases
GCAGCGCCTTTTGAGGGAACGCAGGGGACATGAATGATGCAAAGACAGTTTGAATGTCACACAGGCGGGCCCGGGCTTTA
CGACTTGACCGACCAGATCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 138; Mature: 137

Protein sequence:

>138_residues
MPRALITALCCVALALPAAAQPYRAVNWLYVVPISQDSFEVLDDRWSSAKDFWCAAADYARASGLDGVRKRLYIVDPLGA
SKTTDGVKGVVFTVTPDDAMKNTPSSYSVSVKRRNENLAIGHAYNFCDNLLEEVFGGF

Sequences:

>Translated_138_residues
MPRALITALCCVALALPAAAQPYRAVNWLYVVPISQDSFEVLDDRWSSAKDFWCAAADYARASGLDGVRKRLYIVDPLGA
SKTTDGVKGVVFTVTPDDAMKNTPSSYSVSVKRRNENLAIGHAYNFCDNLLEEVFGGF
>Mature_137_residues
PRALITALCCVALALPAAAQPYRAVNWLYVVPISQDSFEVLDDRWSSAKDFWCAAADYARASGLDGVRKRLYIVDPLGAS
KTTDGVKGVVFTVTPDDAMKNTPSSYSVSVKRRNENLAIGHAYNFCDNLLEEVFGGF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15084; Mature: 14953

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRALITALCCVALALPAAAQPYRAVNWLYVVPISQDSFEVLDDRWSSAKDFWCAAADYA
CCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCHHHHHHHHCCCCCHHHHHHHHHH
RASGLDGVRKRLYIVDPLGASKTTDGVKGVVFTVTPDDAMKNTPSSYSVSVKRRNENLAI
HHCCCCCHHHEEEEECCCCCCCCCCCCCEEEEEECCCHHHHCCCCCEEEEEEECCCCEEE
GHAYNFCDNLLEEVFGGF
EHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PRALITALCCVALALPAAAQPYRAVNWLYVVPISQDSFEVLDDRWSSAKDFWCAAADYA
CHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCHHHHHHHHCCCCCHHHHHHHHHH
RASGLDGVRKRLYIVDPLGASKTTDGVKGVVFTVTPDDAMKNTPSSYSVSVKRRNENLAI
HHCCCCCHHHEEEEECCCCCCCCCCCCCEEEEEECCCHHHHCCCCCEEEEEEECCCCEEE
GHAYNFCDNLLEEVFGGF
EHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA