| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is 110679092
Identifier: 110679092
GI number: 110679092
Start: 1726859
End: 1727143
Strand: Direct
Name: 110679092
Synonym: RD1_1795
Alternate gene names: NA
Gene position: 1726859-1727143 (Clockwise)
Preceding gene: 110679091
Following gene: 110679093
Centisome position: 41.78
GC content: 53.68
Gene sequence:
>285_bases ATGTCATTTCTCAAAAAACTATTCGGAGGTAGCGGTGGCGGTGGGTCTGAGGCCAAAGCCCCGACTGAAACCCATGAGGG CTTTCTGATCACGGCCACACCAATGGCCGAAGGCCCGTCCTATCGGATCTGCGCGATCATCGAAAAAGAAATCGACGGTG AAACACGCAGCCACAAGTTGATCCGCTCGGATATGGTGCAAGGGCTGGAAGACGCACAGGCTGCCAGTTTTCGCAAGGCG AAACAAGTCATTGACGAGCAGGGAGATCGAATTTTCCGTTCCTGA
Upstream 100 bases:
>100_bases ATCGAACTGATCAAACAGCAATGACATAGTTCGCCGTTATCAGTCTTTTCCCTGCACCGCCGCCGCGTTAAGCTTGGGCA AAGCCAAAAGGGGAGCGCGC
Downstream 100 bases:
>100_bases AGGGCTGCAAATGTCTGGTATTTGCAAGGCGAGCCTGTAAGCTAAATGCAGGAATTGAAACGGGTTGGATCATGATGCCC CGGGCTTTGATCACTGCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 94; Mature: 93
Protein sequence:
>94_residues MSFLKKLFGGSGGGGSEAKAPTETHEGFLITATPMAEGPSYRICAIIEKEIDGETRSHKLIRSDMVQGLEDAQAASFRKA KQVIDEQGDRIFRS
Sequences:
>Translated_94_residues MSFLKKLFGGSGGGGSEAKAPTETHEGFLITATPMAEGPSYRICAIIEKEIDGETRSHKLIRSDMVQGLEDAQAASFRKA KQVIDEQGDRIFRS >Mature_93_residues SFLKKLFGGSGGGGSEAKAPTETHEGFLITATPMAEGPSYRICAIIEKEIDGETRSHKLIRSDMVQGLEDAQAASFRKAK QVIDEQGDRIFRS
Specific function: Unknown
COG id: COG5453
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10203; Mature: 10071
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFLKKLFGGSGGGGSEAKAPTETHEGFLITATPMAEGPSYRICAIIEKEIDGETRSHKL CHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEECCCCCCHHHHHH IRSDMVQGLEDAQAASFRKAKQVIDEQGDRIFRS HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SFLKKLFGGSGGGGSEAKAPTETHEGFLITATPMAEGPSYRICAIIEKEIDGETRSHKL HHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEECCCCCCHHHHHH IRSDMVQGLEDAQAASFRKAKQVIDEQGDRIFRS HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA