| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is hisC [H]
Identifier: 110679052
GI number: 110679052
Start: 1679185
End: 1680288
Strand: Reverse
Name: hisC [H]
Synonym: RD1_1752
Alternate gene names: 110679052
Gene position: 1680288-1679185 (Counterclockwise)
Preceding gene: 110679054
Following gene: 110679051
Centisome position: 40.65
GC content: 61.14
Gene sequence:
>1104_bases ATGATTCGTTTTCGCCTGACCAAAATCGCCGAAACCCTGCCAGCCACTGTTCCCTTTGTCGGCCCCGAAACGCAGGAACG CGCGCGCGGCATGCGCTTTGATGCGCGGCTTGGAGCCAATGAAAGCGTCTTTGGTCCCTCCCCGAGTGCGGTGCGCGCGA TGGCGGAAACCCCGCAGTGGATGTATGGCGATCCGGAAAACCATGACCTGCGCAACGCTCTTGCACAGCATCTCGGCACC CCGCCCGATACGATCATGATCGGTGAAGGGATCGACGGGCTGCTTGGCAATCTGGTGCGGCTTTTTGTGGGCCCGGGCGA TGCGGTTGTGACCTCGGACGGAGCCTATCCGACGTTCAACTATCATGTCGCGGGTTTTGGCGGGATTGTGCATAAAGTCC CGTATAATAAGGACTTTGAAGATCTCGCGGCCCTGTTCGAAACGGCCGGTGAGGTGGATGCAAAACTGGTCTACATGTCC AACCCTGACAACCCCATGGGCACGGTCCACAGCGGCTCCGACATCGCCGCAGCCCTCGATGCGCTGCCCTCCGGCACGCT GCTCGTGCTGGATGAGGCCTATCTCGAATGCGCCCCGGAAAGCAGCGCGGTGCCGGTCGCCTATGACGATCCGCGCGTGA TCCGGCTGCGCACCTTCTCCAAAGCGTATGGGCTTGCAGGGGCACGCGTCGGGTATGCGATAGGACATGCGGATGTCATA TCGGCCTTCAACAAGGTCAGAAACCACTTCGGGATGAACCGCTCCGCACAGGAAGGCGCACTGGCGGCACTGTCCGATCA GACATGGCTGCGCTCGGTGGTGGCACGTATCACCTCGTCCCGGCTGCGGATCGCCAAGATCGCCACATCCTGCGGATTGA AGCCAATCAAATCCGCAACAAACTTCGTTGCCATTGATTGCTGCCGCGACAGCGCCTTTGCCAGCCGCGTGTTGGAAGAG ATGCTGGCGCAGGGCATCTTTGTGCGCATGCCCATGGTCGCCCCCCTCAATCGTTGCGTCAGGGTCAGCTGCGGCACACC CGCGGACCTTGACCTTCTGGCCGAAGTTCTGCCAGAGGCCCTGCGGCGCGCAGAAAAAGGCTGA
Upstream 100 bases:
>100_bases TTCTGATAGCTGTAGAAATCCTGACACACATTTCACTGCCTGCGCAACGTCACTGCAAAGCGGGCTTGCTCAAGACGCAT ACCTTGATTTATCACGCCGC
Downstream 100 bases:
>100_bases CGTCCACGCGTGCCGCTCTATACTCTTTGAAAAGAGCGGTCAGCGAGGTGTGATATGGAAGGTCACAAGCTTGGGCGGGC TCCGAATTTCACAGGTGCCT
Product: histidinol-phosphate aminotransferase
Products: NA
Alternate protein names: Imidazole acetol-phosphate transaminase [H]
Number of amino acids: Translated: 367; Mature: 367
Protein sequence:
>367_residues MIRFRLTKIAETLPATVPFVGPETQERARGMRFDARLGANESVFGPSPSAVRAMAETPQWMYGDPENHDLRNALAQHLGT PPDTIMIGEGIDGLLGNLVRLFVGPGDAVVTSDGAYPTFNYHVAGFGGIVHKVPYNKDFEDLAALFETAGEVDAKLVYMS NPDNPMGTVHSGSDIAAALDALPSGTLLVLDEAYLECAPESSAVPVAYDDPRVIRLRTFSKAYGLAGARVGYAIGHADVI SAFNKVRNHFGMNRSAQEGALAALSDQTWLRSVVARITSSRLRIAKIATSCGLKPIKSATNFVAIDCCRDSAFASRVLEE MLAQGIFVRMPMVAPLNRCVRVSCGTPADLDLLAEVLPEALRRAEKG
Sequences:
>Translated_367_residues MIRFRLTKIAETLPATVPFVGPETQERARGMRFDARLGANESVFGPSPSAVRAMAETPQWMYGDPENHDLRNALAQHLGT PPDTIMIGEGIDGLLGNLVRLFVGPGDAVVTSDGAYPTFNYHVAGFGGIVHKVPYNKDFEDLAALFETAGEVDAKLVYMS NPDNPMGTVHSGSDIAAALDALPSGTLLVLDEAYLECAPESSAVPVAYDDPRVIRLRTFSKAYGLAGARVGYAIGHADVI SAFNKVRNHFGMNRSAQEGALAALSDQTWLRSVVARITSSRLRIAKIATSCGLKPIKSATNFVAIDCCRDSAFASRVLEE MLAQGIFVRMPMVAPLNRCVRVSCGTPADLDLLAEVLPEALRRAEKG >Mature_367_residues MIRFRLTKIAETLPATVPFVGPETQERARGMRFDARLGANESVFGPSPSAVRAMAETPQWMYGDPENHDLRNALAQHLGT PPDTIMIGEGIDGLLGNLVRLFVGPGDAVVTSDGAYPTFNYHVAGFGGIVHKVPYNKDFEDLAALFETAGEVDAKLVYMS NPDNPMGTVHSGSDIAAALDALPSGTLLVLDEAYLECAPESSAVPVAYDDPRVIRLRTFSKAYGLAGARVGYAIGHADVI SAFNKVRNHFGMNRSAQEGALAALSDQTWLRSVVARITSSRLRIAKIATSCGLKPIKSATNFVAIDCCRDSAFASRVLEE MLAQGIFVRMPMVAPLNRCVRVSCGTPADLDLLAEVLPEALRRAEKG
Specific function: Histidine biosynthesis; seventh step. [C]
COG id: COG0079
COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788332, Length=333, Percent_Identity=28.5285285285285, Blast_Score=105, Evalue=4e-24, Organism=Escherichia coli, GI1786816, Length=207, Percent_Identity=28.0193236714976, Blast_Score=67, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6322075, Length=359, Percent_Identity=23.6768802228412, Blast_Score=76, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004839 - InterPro: IPR005861 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.6.1.9 [H]
Molecular weight: Translated: 39393; Mature: 39393
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRFRLTKIAETLPATVPFVGPETQERARGMRFDARLGANESVFGPSPSAVRAMAETPQW CCEEEHHHHHHHCCCCCCCCCCCHHHHHCCCEEEHHCCCCCCCCCCCHHHHHHHHCCCCC MYGDPENHDLRNALAQHLGTPPDTIMIGEGIDGLLGNLVRLFVGPGDAVVTSDGAYPTFN CCCCCCCCHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCEEE YHVAGFGGIVHKVPYNKDFEDLAALFETAGEVDAKLVYMSNPDNPMGTVHSGSDIAAALD EEEECCCCHHCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHH ALPSGTLLVLDEAYLECAPESSAVPVAYDDPRVIRLRTFSKAYGLAGARVGYAIGHADVI HCCCCCEEEEEHHHHHCCCCCCCCCEEECCCCEEEEEEHHHHHCCCCHHHHHHHHHHHHH SAFNKVRNHFGMNRSAQEGALAALSDQTWLRSVVARITSSRLRIAKIATSCGLKPIKSAT HHHHHHHHHHCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCC NFVAIDCCRDSAFASRVLEEMLAQGIFVRMPMVAPLNRCVRVSCGTPADLDLLAEVLPEA CEEEEEECCCHHHHHHHHHHHHHCCEEEECCHHHHHHHHEEEECCCCCCHHHHHHHHHHH LRRAEKG HHHHCCC >Mature Secondary Structure MIRFRLTKIAETLPATVPFVGPETQERARGMRFDARLGANESVFGPSPSAVRAMAETPQW CCEEEHHHHHHHCCCCCCCCCCCHHHHHCCCEEEHHCCCCCCCCCCCHHHHHHHHCCCCC MYGDPENHDLRNALAQHLGTPPDTIMIGEGIDGLLGNLVRLFVGPGDAVVTSDGAYPTFN CCCCCCCCHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCEEE YHVAGFGGIVHKVPYNKDFEDLAALFETAGEVDAKLVYMSNPDNPMGTVHSGSDIAAALD EEEECCCCHHCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHH ALPSGTLLVLDEAYLECAPESSAVPVAYDDPRVIRLRTFSKAYGLAGARVGYAIGHADVI HCCCCCEEEEEHHHHHCCCCCCCCCEEECCCCEEEEEEHHHHHCCCCHHHHHHHHHHHHH SAFNKVRNHFGMNRSAQEGALAALSDQTWLRSVVARITSSRLRIAKIATSCGLKPIKSAT HHHHHHHHHHCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCC NFVAIDCCRDSAFASRVLEEMLAQGIFVRMPMVAPLNRCVRVSCGTPADLDLLAEVLPEA CEEEEEECCCHHHHHHHHHHHHHCCEEEECCHHHHHHHHEEEECCCCCCHHHHHHHHHHH LRRAEKG HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA