Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is 110679051

Identifier: 110679051

GI number: 110679051

Start: 1678912

End: 1679130

Strand: Reverse

Name: 110679051

Synonym: RD1_1751

Alternate gene names: NA

Gene position: 1679130-1678912 (Counterclockwise)

Preceding gene: 110679052

Following gene: 110679049

Centisome position: 40.63

GC content: 56.16

Gene sequence:

>219_bases
ATGGAAGGTCACAAGCTTGGGCGGGCTCCGAATTTCACAGGTGCCTGTATCGTCATGTTCGGCGTCAATCTGGCGTGGAT
CCTATTGTTCCTCTTTGCGGTCTACGGCCTTGTTGCAGCGGTCTTTCTGGGTCTGGTCGTCAACCATTGGGTGTCGTGGC
TGGAACATCGCAAACAACTGGAAGATCAGCGCTACTCCGACGCCCCCGCCGACAACTGA

Upstream 100 bases:

>100_bases
GGCCGAAGTTCTGCCAGAGGCCCTGCGGCGCGCAGAAAAAGGCTGACGTCCACGCGTGCCGCTCTATACTCTTTGAAAAG
AGCGGTCAGCGAGGTGTGAT

Downstream 100 bases:

>100_bases
CCGGTGGCAATCACGGTGGATGCAGCCTCAAGCGCGCCCGGCCCGTGCGGAATGTCCAGCGCTTTCAAACCCGCATCCAC
GCCGCCGAGCATCCCCATGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 72; Mature: 72

Protein sequence:

>72_residues
MEGHKLGRAPNFTGACIVMFGVNLAWILLFLFAVYGLVAAVFLGLVVNHWVSWLEHRKQLEDQRYSDAPADN

Sequences:

>Translated_72_residues
MEGHKLGRAPNFTGACIVMFGVNLAWILLFLFAVYGLVAAVFLGLVVNHWVSWLEHRKQLEDQRYSDAPADN
>Mature_72_residues
MEGHKLGRAPNFTGACIVMFGVNLAWILLFLFAVYGLVAAVFLGLVVNHWVSWLEHRKQLEDQRYSDAPADN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8118; Mature: 8118

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGHKLGRAPNFTGACIVMFGVNLAWILLFLFAVYGLVAAVFLGLVVNHWVSWLEHRKQL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EDQRYSDAPADN
HHHHCCCCCCCC
>Mature Secondary Structure
MEGHKLGRAPNFTGACIVMFGVNLAWILLFLFAVYGLVAAVFLGLVVNHWVSWLEHRKQL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EDQRYSDAPADN
HHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA