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The map label for this gene is bepC [H]

Identifier: 110679042

GI number: 110679042

Start: 1670179

End: 1671579

Strand: Direct

Name: bepC [H]

Synonym: RD1_1742

Alternate gene names: 110679042

Gene position: 1670179-1671579 (Clockwise)

Preceding gene: 110679041

Following gene: 110679043

Centisome position: 40.41

GC content: 61.31

Gene sequence:

>1401_bases
ATGCGCAAAGCGGCATTCTCACTTGGCGTTGTTTTTGCATTGGCAGGACCGGCAGCGCAGGCCGAAACTCTGGCGGATGC
TTTGGCATCGGCCTATCAAAACAGCGGCTTGCTTGATCAGAACCGGGCGCTGTTGCGTGCTGCGGACGAAGACGTGGCAG
GTGCCGTCGCGGCACTGAGGCCAATTCTGAATTTCACGGCCAATGTCACCCGTAACTTTGGAACGGCCCGGTCCACGACC
AACGCGGGTGGCATTGTCTCCGGGCTGGACAGTACGCAGGCCGACGTGGGGCTGGTTGCAAGTCTTTTGCTATATGACGG
CGGGGCGGCATCGCTGGACGTCGAGGCGGCAAAGGAAACCGTATTGGCCACGCGCCAGCGCCTGATCAGTGTCGAGCAAC
AAGTGCTGTTGCGCGCTGTCGTGGCCTACCTGAGTGTCTATGCGAACCGCGACGCGGTGCAATTGCGCCAGAACAACCTG
CGGCTTCTCTCCGAGGAATTGCGTGCGGCACAGGATCGCTTTGAGGTTGGCGAGGTGACGCGCACCGACGTTGCACAGGC
CGAGGCCAGCCTCGCGCAGGCGCGCAGTGGTTTGGCAACCGCGCAGGGTGATTTGCAACAGGCGATTGAGGAATATCAGA
ATGTGATTGGCCGCCAGCCCGGTCAGATCGTGCCGCCGCCGCAATTGCCGCAGATTGAAAGCGACGTGGAGGCTGCGCGC
GCCCTTGCGGTCAGGATACATCCCGATCTGCGGGAGGCTCAGCACCGTGTGGCAGCCTCTGAAATCAATGTTCAACGCGC
GCGATCCGCGTTGCAGCCGACGATTTCGGCCGTCGGCAGTTTGGGCGTGACCGATGATCTGGAATCGCGTGACTACCGCA
ACTCGGGTACGATCGGGATCGAGCTTTCACAACCGATCTATCGCGGCGGCGCGCTCAGCTCTTCAATCCGTCGCGCGATC
GCATCGCGTGATGCTGAACTGGGCAACCTGCATGAGGTGCGCAAAACGATTTCACAGGACGTGGGCAACGCCTATGCCGC
ATTGGCCGCGCGTCGTGCCAGCCTTGCGGCGAGTGAAGAGCGTATTCGCGCCGCGCGGATCGCGTTCCGGGGCGTGCGCG
AAGAGGCAACGCTTGGCGCGCGGACAACTCTTGATGTTCTGGATGCCGAGCAGGAATTGCTGGACGCTGAGACAGCACGC
ATATCTGATGAGGCAAACCTTTACATCGCGGCCTACGGGGTGCTCGATGCGACGGGCAGGCTGACGGCCCAGAACCTGAA
CCTCGGTGTGCAGCAGTATGATCCGACGGCCTACTACAATCTCGCCAAAGATGCACCGACCACACAGTCGGAGCAGGGCC
GCCAGCTTGATCGGGTATTGCGTTCGCTGCAGCGAAATTAA

Upstream 100 bases:

>100_bases
TGCGGCATTTCAGTTTTAGGCGGTGTGGGACAGTAAACAGGCTCTCGGAGAGGCATAATAAATGGCAGTAAGAAGAAAAA
CCAGAAGCGCTGCGCAAGTT

Downstream 100 bases:

>100_bases
GGCTTTTTTGTCAAACCATTGTGCCGCGCGGCTGCGCGCGGTAGACTGCACGCCTGTGTGGAGTGGTAAGATATGTCAGA
GCGTGTTGCGAATACAGAGG

Product: TolC family type I secretion outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 466; Mature: 466

Protein sequence:

>466_residues
MRKAAFSLGVVFALAGPAAQAETLADALASAYQNSGLLDQNRALLRAADEDVAGAVAALRPILNFTANVTRNFGTARSTT
NAGGIVSGLDSTQADVGLVASLLLYDGGAASLDVEAAKETVLATRQRLISVEQQVLLRAVVAYLSVYANRDAVQLRQNNL
RLLSEELRAAQDRFEVGEVTRTDVAQAEASLAQARSGLATAQGDLQQAIEEYQNVIGRQPGQIVPPPQLPQIESDVEAAR
ALAVRIHPDLREAQHRVAASEINVQRARSALQPTISAVGSLGVTDDLESRDYRNSGTIGIELSQPIYRGGALSSSIRRAI
ASRDAELGNLHEVRKTISQDVGNAYAALAARRASLAASEERIRAARIAFRGVREEATLGARTTLDVLDAEQELLDAETAR
ISDEANLYIAAYGVLDATGRLTAQNLNLGVQQYDPTAYYNLAKDAPTTQSEQGRQLDRVLRSLQRN

Sequences:

>Translated_466_residues
MRKAAFSLGVVFALAGPAAQAETLADALASAYQNSGLLDQNRALLRAADEDVAGAVAALRPILNFTANVTRNFGTARSTT
NAGGIVSGLDSTQADVGLVASLLLYDGGAASLDVEAAKETVLATRQRLISVEQQVLLRAVVAYLSVYANRDAVQLRQNNL
RLLSEELRAAQDRFEVGEVTRTDVAQAEASLAQARSGLATAQGDLQQAIEEYQNVIGRQPGQIVPPPQLPQIESDVEAAR
ALAVRIHPDLREAQHRVAASEINVQRARSALQPTISAVGSLGVTDDLESRDYRNSGTIGIELSQPIYRGGALSSSIRRAI
ASRDAELGNLHEVRKTISQDVGNAYAALAARRASLAASEERIRAARIAFRGVREEATLGARTTLDVLDAEQELLDAETAR
ISDEANLYIAAYGVLDATGRLTAQNLNLGVQQYDPTAYYNLAKDAPTTQSEQGRQLDRVLRSLQRN
>Mature_466_residues
MRKAAFSLGVVFALAGPAAQAETLADALASAYQNSGLLDQNRALLRAADEDVAGAVAALRPILNFTANVTRNFGTARSTT
NAGGIVSGLDSTQADVGLVASLLLYDGGAASLDVEAAKETVLATRQRLISVEQQVLLRAVVAYLSVYANRDAVQLRQNNL
RLLSEELRAAQDRFEVGEVTRTDVAQAEASLAQARSGLATAQGDLQQAIEEYQNVIGRQPGQIVPPPQLPQIESDVEAAR
ALAVRIHPDLREAQHRVAASEINVQRARSALQPTISAVGSLGVTDDLESRDYRNSGTIGIELSQPIYRGGALSSSIRRAI
ASRDAELGNLHEVRKTISQDVGNAYAALAARRASLAASEERIRAARIAFRGVREEATLGARTTLDVLDAEQELLDAETAR
ISDEANLYIAAYGVLDATGRLTAQNLNLGVQQYDPTAYYNLAKDAPTTQSEQGRQLDRVLRSLQRN

Specific function: Involved in the efflux of toxic and relatively hydrophobic compounds. Influences survival inside the host [H]

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cell outer membrane (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

Organism=Escherichia coli, GI87082199, Length=408, Percent_Identity=24.2647058823529, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI1786785, Length=342, Percent_Identity=27.4853801169591, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423
- InterPro:   IPR010130 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 49846; Mature: 49846

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.2 %Met     (Translated Protein)
0.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.2 %Met     (Mature Protein)
0.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKAAFSLGVVFALAGPAAQAETLADALASAYQNSGLLDQNRALLRAADEDVAGAVAALR
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHH
PILNFTANVTRNFGTARSTTNAGGIVSGLDSTQADVGLVASLLLYDGGAASLDVEAAKET
HHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCEEHHHHHHH
VLATRQRLISVEQQVLLRAVVAYLSVYANRDAVQLRQNNLRLLSEELRAAQDRFEVGEVT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
RTDVAQAEASLAQARSGLATAQGDLQQAIEEYQNVIGRQPGQIVPPPQLPQIESDVEAAR
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHH
ALAVRIHPDLREAQHRVAASEINVQRARSALQPTISAVGSLGVTDDLESRDYRNSGTIGI
HHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEE
ELSQPIYRGGALSSSIRRAIASRDAELGNLHEVRKTISQDVGNAYAALAARRASLAASEE
EECCCHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RIRAARIAFRGVREEATLGARTTLDVLDAEQELLDAETARISDEANLYIAAYGVLDATGR
HHHHHHHHHHHCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCC
LTAQNLNLGVQQYDPTAYYNLAKDAPTTQSEQGRQLDRVLRSLQRN
EEEHHCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRKAAFSLGVVFALAGPAAQAETLADALASAYQNSGLLDQNRALLRAADEDVAGAVAALR
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHH
PILNFTANVTRNFGTARSTTNAGGIVSGLDSTQADVGLVASLLLYDGGAASLDVEAAKET
HHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCEEHHHHHHH
VLATRQRLISVEQQVLLRAVVAYLSVYANRDAVQLRQNNLRLLSEELRAAQDRFEVGEVT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
RTDVAQAEASLAQARSGLATAQGDLQQAIEEYQNVIGRQPGQIVPPPQLPQIESDVEAAR
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHH
ALAVRIHPDLREAQHRVAASEINVQRARSALQPTISAVGSLGVTDDLESRDYRNSGTIGI
HHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEE
ELSQPIYRGGALSSSIRRAIASRDAELGNLHEVRKTISQDVGNAYAALAARRASLAASEE
EECCCHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RIRAARIAFRGVREEATLGARTTLDVLDAEQELLDAETARISDEANLYIAAYGVLDATGR
HHHHHHHHHHHCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCC
LTAQNLNLGVQQYDPTAYYNLAKDAPTTQSEQGRQLDRVLRSLQRN
EEEHHCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12271122 [H]