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The map label for this gene is yurN [H]

Identifier: 110679031

GI number: 110679031

Start: 1661502

End: 1662425

Strand: Direct

Name: yurN [H]

Synonym: RD1_1730

Alternate gene names: 110679031

Gene position: 1661502-1662425 (Clockwise)

Preceding gene: 110679030

Following gene: 110679032

Centisome position: 40.2

GC content: 54.87

Gene sequence:

>924_bases
ATGCCTGCGCCCTCAAAACCGAAAACCAGATGGCATATCGCTGTTTTTCTGGCACCTGCCGTGCTGGTTTATACCGCGGT
CATGATCTATCCGCTCTTCAACACCCTGCGACTTGCGCTTTATGCTGAGGTCGATCAGCAGCGGATATGGGTGGGCCTGC
AGAACTTTCAAACGCTGTTCGGGGATGCGATCTGGTCTGAACAATTCTGGAATGCCTTGGGCAATAATGCGTGGTTCTTT
CTGATCCACATGCTGGTGCAGAACCCGATTGGCATTGCACTCGCGGCGCTATTGTCATCCCCGCGTCTGCGGTTTTCGGC
GTTTTACCGATCCGCGATCTTCATCCCCACGATCCTGTCTTTTGTCATCGTTGGTTTCGCGTGGAAGCTGATCCTCTCCC
CGATCTGGGGCATTGCGCCGGGTATGCTGGATGCAATTGGTTTGAAGTTCCTCTACCAGCCGTGGCTTGGCAAGGAAGAG
TACGCCCTGACCACGCTGAGCCTTGTGTCGGTCTGGCAATACGTAGGCATTCCCATGATGCTGATCTATGCGGCCCTGCT
GTCCATTCCTGATGAAATTCTGGAGGCGGGCGAATGCGACGGGATCACGGGCATGTCCGCGTTCTGGAAGATCAAACTGC
CGCTGATCCTGCCTTCTATCGGGATCATTTCGGTTCTGACTTTCGTGGCGAATTTCAACGCCTTTGATCTGATTTATGCG
GCACAGGGTGCGCTTGCGGGGCCGGATTTCTCGACGGATATTCTGGGGACGTTCATGTATCGCACCTTCTTTGGCTTTCA
GTTGCAACTGGGCGATCCGCATATGGGCTCCGCGATTGCCTCGGCCATGTTCGGCATCATCCTGATCGGCGTGTGCACTT
ACCTCTTCGGCATTCAGCGCCGCCTGCGCAATTACCAGTTCTGA

Upstream 100 bases:

>100_bases
TGGTACACACCACAACAGTAACGCCTGCGGCAAATCCCCCGGGGCGATGCATGCTCGCCCCGGGGTTTGACCCGCGCTGA
CATCGCCAAGGAGACGCCGC

Downstream 100 bases:

>100_bases
GGGGGGCGAGACCATGACCACCGCGCGCCGCATCTCCGGGACAACGATTGCCGCTCATGCTGTGCTGATGACCTATACGG
TGATCGCGCTTTTCCCGGTG

Product: putative sugar ABC transporter, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 306

Protein sequence:

>307_residues
MPAPSKPKTRWHIAVFLAPAVLVYTAVMIYPLFNTLRLALYAEVDQQRIWVGLQNFQTLFGDAIWSEQFWNALGNNAWFF
LIHMLVQNPIGIALAALLSSPRLRFSAFYRSAIFIPTILSFVIVGFAWKLILSPIWGIAPGMLDAIGLKFLYQPWLGKEE
YALTTLSLVSVWQYVGIPMMLIYAALLSIPDEILEAGECDGITGMSAFWKIKLPLILPSIGIISVLTFVANFNAFDLIYA
AQGALAGPDFSTDILGTFMYRTFFGFQLQLGDPHMGSAIASAMFGIILIGVCTYLFGIQRRLRNYQF

Sequences:

>Translated_307_residues
MPAPSKPKTRWHIAVFLAPAVLVYTAVMIYPLFNTLRLALYAEVDQQRIWVGLQNFQTLFGDAIWSEQFWNALGNNAWFF
LIHMLVQNPIGIALAALLSSPRLRFSAFYRSAIFIPTILSFVIVGFAWKLILSPIWGIAPGMLDAIGLKFLYQPWLGKEE
YALTTLSLVSVWQYVGIPMMLIYAALLSIPDEILEAGECDGITGMSAFWKIKLPLILPSIGIISVLTFVANFNAFDLIYA
AQGALAGPDFSTDILGTFMYRTFFGFQLQLGDPHMGSAIASAMFGIILIGVCTYLFGIQRRLRNYQF
>Mature_306_residues
PAPSKPKTRWHIAVFLAPAVLVYTAVMIYPLFNTLRLALYAEVDQQRIWVGLQNFQTLFGDAIWSEQFWNALGNNAWFFL
IHMLVQNPIGIALAALLSSPRLRFSAFYRSAIFIPTILSFVIVGFAWKLILSPIWGIAPGMLDAIGLKFLYQPWLGKEEY
ALTTLSLVSVWQYVGIPMMLIYAALLSIPDEILEAGECDGITGMSAFWKIKLPLILPSIGIISVLTFVANFNAFDLIYAA
QGALAGPDFSTDILGTFMYRTFFGFQLQLGDPHMGSAIASAMFGIILIGVCTYLFGIQRRLRNYQF

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=311, Percent_Identity=28.2958199356913, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1787570, Length=256, Percent_Identity=25.390625, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1790465, Length=256, Percent_Identity=29.6875, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34319; Mature: 34188

Theoretical pI: Translated: 8.17; Mature: 8.17

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAPSKPKTRWHIAVFLAPAVLVYTAVMIYPLFNTLRLALYAEVDQQRIWVGLQNFQTLF
CCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GDAIWSEQFWNALGNNAWFFLIHMLVQNPIGIALAALLSSPRLRFSAFYRSAIFIPTILS
HHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
FVIVGFAWKLILSPIWGIAPGMLDAIGLKFLYQPWLGKEEYALTTLSLVSVWQYVGIPMM
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHH
LIYAALLSIPDEILEAGECDGITGMSAFWKIKLPLILPSIGIISVLTFVANFNAFDLIYA
HHHHHHHHCCHHHHCCCCCCCCCCCCHHHEEEHHHHHCCHHHHHHHHHHHCCCHHHHHHH
AQGALAGPDFSTDILGTFMYRTFFGFQLQLGDPHMGSAIASAMFGIILIGVCTYLFGIQR
HCCCCCCCCCCHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RLRNYQF
HHHCCCC
>Mature Secondary Structure 
PAPSKPKTRWHIAVFLAPAVLVYTAVMIYPLFNTLRLALYAEVDQQRIWVGLQNFQTLF
CCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH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HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]