| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is kefC [H]
Identifier: 110678992
GI number: 110678992
Start: 1622598
End: 1624169
Strand: Reverse
Name: kefC [H]
Synonym: RD1_1689
Alternate gene names: 110678992
Gene position: 1624169-1622598 (Counterclockwise)
Preceding gene: 110678993
Following gene: 110678986
Centisome position: 39.3
GC content: 60.75
Gene sequence:
>1572_bases ATGGTTTTTGAAGTCTTCGCAATCGGCGCTGCATTCATCTTTGGCCTTGCGGCAAAACCGCTGGGGCTGCCACCGCTGGT GGGTTTTCTGACTGCGGGATTCGTCATCAACGCCGCCGGGCCGCGTGTCGGCATGCCCGATACGACCGGGCCGATCCTTG AATATATCGCAAACCTCGGTGTCTTGATTCTACTCTTCACGGTGGGCCTCAAGCTGAAGATCAAACAGATCGGCGAGCCG CATGTTGTCGGTGTGTCCCTGCTGCACTTTGCCTTGTCGGTTGCGCTTTTCACCCCGCTGGCGCGCGCATTTTTCACCGA TGACTGGACGGTGGCCCTGCTGGTCGGCATCGCACTGGCGTTTTCCTCGACCGTGCTGGCCGCCAAAATGCTGGAATCCA AACGCGAAATGGGCACATTCCATGGCCGCACCGCCATCGGCATTTTGATCGTGCAGGACATCATCGCGCTTGTTGTGCTG GCGATCTTTTCGGGCAAGGTGCCGGGACCCTGGGCGCTGCTGATCTTTGCCACGCCCCTGTTGCGCCCGTTTTTGCACAA GCTGCTCGACTGGGCGGGCCATGACGAGGTGCTGGTGCTCGCAGGCATGGCGCTTGCGCTTGTCATCGGCGGTTACGGGT TCGAGGTCATCGGGCTAAAGGGCGAGATCGGCGCGCTTGTGATGGGCCTGCTGTTGTCCAATCACCCGCGCGCAAGCGAG TTGTCAGACGCCCTTTGGTCGCTGAAGGAGGTATTCCTCGTCGGGTTCTTTCTGTCGATTGGCATGTCGGGCTTGCCGGA CTGGGACGCGCTCGTCTTTGCCATCGTGCTGGGGCTGATGCTGCCGCTCAAGGGGATCCTGTTCTTTTTCCTGCTTGTAG CCTTCCGCCTGCGGGCCAGAACCGCGTTTCTGTCCGCCCTCTCGCTGACGGTCTACAGCGAATTCGGCCTGATCGTGGCC ACCGGCATACCGGCAGCGGAACCCTTCGTGGTGCCGCTTGCCATCGCTGTATCGGTATCCTTCCTGATCGCGGCACCAGT CAACCGGCTGGCCCATCCGCTTTACGAACGCTTTGAAAACCGTTTGCACCGGTTTGAGCGGGTGACGCGCCACCCCGATG AGCAGCCCGCGGATCTCGGGGATGCGGATGTGATGATTTTCGGCATGGGACGCACCGGCTCCGCCACGTATGAGGTGCTG ATCCACAACGGGTCCCGCCCGATCGGGCTGGATGCGGACACCTACAAGGCCGCAGCCCACGTCAAAGCCGGGCGCAATGT GGTATTTGCCGATGCCGAAGACAGCAATTTCTGGAGCAGTGTCGATCTGAGCAAGATCAAATCGGCGGTTCTGGCGATGG ATGATCTGGAGGCAAAGCTGATCGCGACCCGCACGTTGCGCGCCAAAGGGTTTACAGGTCCGATCGTGACCCATGCCCTG CATGAGGAGCACATTGATCTGATGAAAGAGGCCGGCGCCAATCAGACCTATCTGACCATGCAGGAAGCGGGGCGCAGCCT CGCGCACCACGCCGCCGGCACCACGGGCGTCGATCCCTTGTCGGACAAATGA
Upstream 100 bases:
>100_bases TGCATGACGTGCGGTCGTTCGACATGCTTTGGTGCAACCGCAAGACGCGCACCGGCAAAACCGAACCGGTGGCACAGCAA CAAAAGAACGACCCGGCATT
Downstream 100 bases:
>100_bases CCGGCGCGTGCTGCGTCAATGCGGCTTGGGGCGGGGTTGGTTTTCCCGCTCTGCATCAAGTGCCTCTTGCAAAGCATCCG CATCGTCCGGGTTTTCGGAG
Product: putative potassium efflux transporter
Products: Proton [Cytoplasm]; K (I) [Periplasm] [C]
Alternate protein names: K(+)/H(+) antiporter [H]
Number of amino acids: Translated: 523; Mature: 523
Protein sequence:
>523_residues MVFEVFAIGAAFIFGLAAKPLGLPPLVGFLTAGFVINAAGPRVGMPDTTGPILEYIANLGVLILLFTVGLKLKIKQIGEP HVVGVSLLHFALSVALFTPLARAFFTDDWTVALLVGIALAFSSTVLAAKMLESKREMGTFHGRTAIGILIVQDIIALVVL AIFSGKVPGPWALLIFATPLLRPFLHKLLDWAGHDEVLVLAGMALALVIGGYGFEVIGLKGEIGALVMGLLLSNHPRASE LSDALWSLKEVFLVGFFLSIGMSGLPDWDALVFAIVLGLMLPLKGILFFFLLVAFRLRARTAFLSALSLTVYSEFGLIVA TGIPAAEPFVVPLAIAVSVSFLIAAPVNRLAHPLYERFENRLHRFERVTRHPDEQPADLGDADVMIFGMGRTGSATYEVL IHNGSRPIGLDADTYKAAAHVKAGRNVVFADAEDSNFWSSVDLSKIKSAVLAMDDLEAKLIATRTLRAKGFTGPIVTHAL HEEHIDLMKEAGANQTYLTMQEAGRSLAHHAAGTTGVDPLSDK
Sequences:
>Translated_523_residues MVFEVFAIGAAFIFGLAAKPLGLPPLVGFLTAGFVINAAGPRVGMPDTTGPILEYIANLGVLILLFTVGLKLKIKQIGEP HVVGVSLLHFALSVALFTPLARAFFTDDWTVALLVGIALAFSSTVLAAKMLESKREMGTFHGRTAIGILIVQDIIALVVL AIFSGKVPGPWALLIFATPLLRPFLHKLLDWAGHDEVLVLAGMALALVIGGYGFEVIGLKGEIGALVMGLLLSNHPRASE LSDALWSLKEVFLVGFFLSIGMSGLPDWDALVFAIVLGLMLPLKGILFFFLLVAFRLRARTAFLSALSLTVYSEFGLIVA TGIPAAEPFVVPLAIAVSVSFLIAAPVNRLAHPLYERFENRLHRFERVTRHPDEQPADLGDADVMIFGMGRTGSATYEVL IHNGSRPIGLDADTYKAAAHVKAGRNVVFADAEDSNFWSSVDLSKIKSAVLAMDDLEAKLIATRTLRAKGFTGPIVTHAL HEEHIDLMKEAGANQTYLTMQEAGRSLAHHAAGTTGVDPLSDK >Mature_523_residues MVFEVFAIGAAFIFGLAAKPLGLPPLVGFLTAGFVINAAGPRVGMPDTTGPILEYIANLGVLILLFTVGLKLKIKQIGEP HVVGVSLLHFALSVALFTPLARAFFTDDWTVALLVGIALAFSSTVLAAKMLESKREMGTFHGRTAIGILIVQDIIALVVL AIFSGKVPGPWALLIFATPLLRPFLHKLLDWAGHDEVLVLAGMALALVIGGYGFEVIGLKGEIGALVMGLLLSNHPRASE LSDALWSLKEVFLVGFFLSIGMSGLPDWDALVFAIVLGLMLPLKGILFFFLLVAFRLRARTAFLSALSLTVYSEFGLIVA TGIPAAEPFVVPLAIAVSVSFLIAAPVNRLAHPLYERFENRLHRFERVTRHPDEQPADLGDADVMIFGMGRTGSATYEVL IHNGSRPIGLDADTYKAAAHVKAGRNVVFADAEDSNFWSSVDLSKIKSAVLAMDDLEAKLIATRTLRAKGFTGPIVTHAL HEEHIDLMKEAGANQTYLTMQEAGRSLAHHAAGTTGVDPLSDK
Specific function: Transport system that facilitates potassium-efflux, possibly by potassium-proton antiport [H]
COG id: COG4651
COG function: function code P; Kef-type K+ transport system, predicted NAD-binding component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RCK N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1786232, Length=551, Percent_Identity=26.3157894736842, Blast_Score=102, Evalue=6e-23, Organism=Escherichia coli, GI1786685, Length=537, Percent_Identity=24.3947858472998, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1789749, Length=466, Percent_Identity=24.6781115879828, Blast_Score=75, Evalue=8e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 - InterPro: IPR004771 - InterPro: IPR006036 - InterPro: IPR016040 - InterPro: IPR003148 [H]
Pfam domain/function: PF00999 Na_H_Exchanger; PF02254 TrkA_N [H]
EC number: NA
Molecular weight: Translated: 56044; Mature: 56044
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVFEVFAIGAAFIFGLAAKPLGLPPLVGFLTAGFVINAAGPRVGMPDTTGPILEYIANLG CEEEHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHHHHHH VLILLFTVGLKLKIKQIGEPHVVGVSLLHFALSVALFTPLARAFFTDDWTVALLVGIALA HHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH FSSTVLAAKMLESKREMGTFHGRTAIGILIVQDIIALVVLAIFSGKVPGPWALLIFATPL HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH LRPFLHKLLDWAGHDEVLVLAGMALALVIGGYGFEVIGLKGEIGALVMGLLLSNHPRASE HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCCCCHHH LSDALWSLKEVFLVGFFLSIGMSGLPDWDALVFAIVLGLMLPLKGILFFFLLVAFRLRAR HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TAFLSALSLTVYSEFGLIVATGIPAAEPFVVPLAIAVSVSFLIAAPVNRLAHPLYERFEN HHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLHRFERVTRHPDEQPADLGDADVMIFGMGRTGSATYEVLIHNGSRPIGLDADTYKAAAH HHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCCCCCHHHHHHHH VKAGRNVVFADAEDSNFWSSVDLSKIKSAVLAMDDLEAKLIATRTLRAKGFTGPIVTHAL HHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH HEEHIDLMKEAGANQTYLTMQEAGRSLAHHAAGTTGVDPLSDK HHHHHHHHHHCCCCCEEEEHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MVFEVFAIGAAFIFGLAAKPLGLPPLVGFLTAGFVINAAGPRVGMPDTTGPILEYIANLG CEEEHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHHHHHH VLILLFTVGLKLKIKQIGEPHVVGVSLLHFALSVALFTPLARAFFTDDWTVALLVGIALA HHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH FSSTVLAAKMLESKREMGTFHGRTAIGILIVQDIIALVVLAIFSGKVPGPWALLIFATPL HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH LRPFLHKLLDWAGHDEVLVLAGMALALVIGGYGFEVIGLKGEIGALVMGLLLSNHPRASE HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCCCCHHH LSDALWSLKEVFLVGFFLSIGMSGLPDWDALVFAIVLGLMLPLKGILFFFLLVAFRLRAR HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TAFLSALSLTVYSEFGLIVATGIPAAEPFVVPLAIAVSVSFLIAAPVNRLAHPLYERFEN HHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLHRFERVTRHPDEQPADLGDADVMIFGMGRTGSATYEVLIHNGSRPIGLDADTYKAAAH HHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCCCCCHHHHHHHH VKAGRNVVFADAEDSNFWSSVDLSKIKSAVLAMDDLEAKLIATRTLRAKGFTGPIVTHAL HHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH HEEHIDLMKEAGANQTYLTMQEAGRSLAHHAAGTTGVDPLSDK HHHHHHHHHHCCCCCEEEEHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; K (I) [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + K (I) [Cytoplasm] = Proton [Cytoplasm] + K (I) [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA