| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is mdoG [H]
Identifier: 110678973
GI number: 110678973
Start: 1603353
End: 1604879
Strand: Reverse
Name: mdoG [H]
Synonym: RD1_1669
Alternate gene names: 110678973
Gene position: 1604879-1603353 (Counterclockwise)
Preceding gene: 110678974
Following gene: 110678972
Centisome position: 38.83
GC content: 62.08
Gene sequence:
>1527_bases ATGCTGCGTCGAGAGCTTCTCAAATCACTGGTGGCCGTGGCCACCTTGCGCCCGACCGTTCTGGCGGCGCAGGAACCCGG GCTGCAAACCGGTGCCGCGACCGCATTCGACGCGCAGATGGTGACGGCGCGGGCCAAGGCGCTGGCGGAAAAACCCTATG CCCCGCGCCCGCTGATCCCGGAAAGCTGGCGCAACCTCAGCTATGATCAATATCGCAAGATCTGGTTTGACGGGCGCAAC GCGCTTTGGGAAAACACGGATCGCCCGCAACGGGTTGATGTCTTTCCCCCCGGTCTCTATTTCCCGCAACCGGTCGAGAT CAATGTCGTGGAAAACGGCACTGCACGGCCCTTGCAATTCGACATGGGTGTCTTTGACAGCACGGACAAATTTCCCGACG TGGAGATTGACGAGACGCTGGGCTATTCGGGCCTGCGGCTGCGCGCCGAACTGGAACAACCCGGCATCTTTCAGGAATAC GCGGTTTTTCAGGGCGCCAGCTATTTTCGCGGCATCGGCACGGGCGAGACATACGGGCTGTCCGCACGGGGTCTGGCCTT GAAAACCGCCGACCCCGAGGGCGAGGAGTTTCCCGATTTCACCGCCTTCTGGCTGGAAACGCCGCAACCCGGTGCGCCGG ACGTGGTGTTGCACGCGCTGCTGGATGGTCCAAGTTGCACCGGGGCCTACCGCTTTGTCATCACCCATGGTGAGACACTG ACCATGCAGGTCGAGGCCGAGATTTTCGCCCGCGAAACGCTGACCCACATTGGGATCGCGCCTCTGACATCCATGTTTCT CTTTGATGCCACGATGCGCGAGCGGTTTTCCGATTTTCGCCCCGCTGTGCATGACAGCGATGGCCTGATGATCCATAACG GCGCCGGCGAAACCATCTGGCGTCCGCTCGCCAACCCCAAGAACCTGCAGATCAGCGCCTTTGTCGACAATAACCCGCGC GGCTTTGGCCTCATGCAGCGGGCGCGTGCCTTCAGCGATTTTGCCGATCTTGAAGCGCTTTATCACAACCGCCCCGCGCT TTGGGTCACGCCCGGTGAGGGCTGGGGGCCGGGGGCGGTCACGCTGGTGGAAATCCCCGCCGATCTGGAAATCTACGACA ACATCGTGTCCTATTGGCGCCCCGCTGCGCCGCTTCCTGCGGGCGAAAGCCACAAGATGTCCTACCGTCTGGACTGGGCC GATGATCCTGCCCCCCGGACAGGCATGCCGCTGCGCGTCAGGGACACGGCGATGGGCGCGCGACCGGAAGGCGGAATTGT CGTCGCCATCGACTTTGAGGGACGCGAAGATGTGCCCGAAGACCTGAGCCAGCTTGATATTGTCTTGCGCAGCAGCACCG GTGAGGTGTCGCAAGGACTCGTGCAGCGCAATCCGGAGACCGGCGGACCCCGCCTTGCCTTCACTTTTGACCCGCAAGAA GCCGATCTGGTGGAATTCCGTGCCCAGTTGCGCCTGCAGGACGCGCCTTTCACAGAAATCTGGCTTTATCGCTGGACACG CGCATGA
Upstream 100 bases:
>100_bases AGGTCATCGTCAATCTGGCGGGTTTTGCCATCCTCATCGGGGTCGCCTATGGGGTGGGATGGTTCAAATCCCAGCCCTGG CGCAAAAAGGCGGTGCGTTA
Downstream 100 bases:
>100_bases GCGACAACGGCAAAACCGCCTTCATGGCAATGCCCCGGCGCGCCCCGCTTGAGATGATCGCGCAGGACTTTGGCCGCCAG CCGGTCCACCATGCGCCTGC
Product: glucan biosynthesis protein G
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 508; Mature: 508
Protein sequence:
>508_residues MLRRELLKSLVAVATLRPTVLAAQEPGLQTGAATAFDAQMVTARAKALAEKPYAPRPLIPESWRNLSYDQYRKIWFDGRN ALWENTDRPQRVDVFPPGLYFPQPVEINVVENGTARPLQFDMGVFDSTDKFPDVEIDETLGYSGLRLRAELEQPGIFQEY AVFQGASYFRGIGTGETYGLSARGLALKTADPEGEEFPDFTAFWLETPQPGAPDVVLHALLDGPSCTGAYRFVITHGETL TMQVEAEIFARETLTHIGIAPLTSMFLFDATMRERFSDFRPAVHDSDGLMIHNGAGETIWRPLANPKNLQISAFVDNNPR GFGLMQRARAFSDFADLEALYHNRPALWVTPGEGWGPGAVTLVEIPADLEIYDNIVSYWRPAAPLPAGESHKMSYRLDWA DDPAPRTGMPLRVRDTAMGARPEGGIVVAIDFEGREDVPEDLSQLDIVLRSSTGEVSQGLVQRNPETGGPRLAFTFDPQE ADLVEFRAQLRLQDAPFTEIWLYRWTRA
Sequences:
>Translated_508_residues MLRRELLKSLVAVATLRPTVLAAQEPGLQTGAATAFDAQMVTARAKALAEKPYAPRPLIPESWRNLSYDQYRKIWFDGRN ALWENTDRPQRVDVFPPGLYFPQPVEINVVENGTARPLQFDMGVFDSTDKFPDVEIDETLGYSGLRLRAELEQPGIFQEY AVFQGASYFRGIGTGETYGLSARGLALKTADPEGEEFPDFTAFWLETPQPGAPDVVLHALLDGPSCTGAYRFVITHGETL TMQVEAEIFARETLTHIGIAPLTSMFLFDATMRERFSDFRPAVHDSDGLMIHNGAGETIWRPLANPKNLQISAFVDNNPR GFGLMQRARAFSDFADLEALYHNRPALWVTPGEGWGPGAVTLVEIPADLEIYDNIVSYWRPAAPLPAGESHKMSYRLDWA DDPAPRTGMPLRVRDTAMGARPEGGIVVAIDFEGREDVPEDLSQLDIVLRSSTGEVSQGLVQRNPETGGPRLAFTFDPQE ADLVEFRAQLRLQDAPFTEIWLYRWTRA >Mature_508_residues MLRRELLKSLVAVATLRPTVLAAQEPGLQTGAATAFDAQMVTARAKALAEKPYAPRPLIPESWRNLSYDQYRKIWFDGRN ALWENTDRPQRVDVFPPGLYFPQPVEINVVENGTARPLQFDMGVFDSTDKFPDVEIDETLGYSGLRLRAELEQPGIFQEY AVFQGASYFRGIGTGETYGLSARGLALKTADPEGEEFPDFTAFWLETPQPGAPDVVLHALLDGPSCTGAYRFVITHGETL TMQVEAEIFARETLTHIGIAPLTSMFLFDATMRERFSDFRPAVHDSDGLMIHNGAGETIWRPLANPKNLQISAFVDNNPR GFGLMQRARAFSDFADLEALYHNRPALWVTPGEGWGPGAVTLVEIPADLEIYDNIVSYWRPAAPLPAGESHKMSYRLDWA DDPAPRTGMPLRVRDTAMGARPEGGIVVAIDFEGREDVPEDLSQLDIVLRSSTGEVSQGLVQRNPETGGPRLAFTFDPQE ADLVEFRAQLRLQDAPFTEIWLYRWTRA
Specific function: Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs) [H]
COG id: COG3131
COG function: function code P; Periplasmic glucans biosynthesis protein
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the opgD/opgG family [H]
Homologues:
Organism=Escherichia coli, GI1787286, Length=492, Percent_Identity=38.2113821138211, Blast_Score=335, Evalue=3e-93, Organism=Escherichia coli, GI145693128, Length=539, Percent_Identity=35.4359925788497, Blast_Score=290, Evalue=1e-79,
Paralogues:
None
Copy number: 280 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014438 - InterPro: IPR007444 - InterPro: IPR011013 - InterPro: IPR014756 [H]
Pfam domain/function: PF04349 MdoG [H]
EC number: NA
Molecular weight: Translated: 56621; Mature: 56621
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRRELLKSLVAVATLRPTVLAAQEPGLQTGAATAFDAQMVTARAKALAEKPYAPRPLIP CCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC ESWRNLSYDQYRKIWFDGRNALWENTDRPQRVDVFPPGLYFPQPVEINVVENGTARPLQF HHHHCCCHHHHHEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCCCCEEE DMGVFDSTDKFPDVEIDETLGYSGLRLRAELEQPGIFQEYAVFQGASYFRGIGTGETYGL ECCCCCCCCCCCCCCHHHHCCCCCEEEEEECCCCCCHHHHHHHCCCHHHCCCCCCCCCCC SARGLALKTADPEGEEFPDFTAFWLETPQPGAPDVVLHALLDGPSCTGAYRFVITHGETL CCCCEEEECCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCEEEEEEECCCEE TMQVEAEIFARETLTHIGIAPLTSMFLFDATMRERFSDFRPAVHDSDGLMIHNGAGETIW EEEEEHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHH RPLANPKNLQISAFVDNNPRGFGLMQRARAFSDFADLEALYHNRPALWVTPGEGWGPGAV HCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEE TLVEIPADLEIYDNIVSYWRPAAPLPAGESHKMSYRLDWADDPAPRTGMPLRVRDTAMGA EEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEECCCCCC RPEGGIVVAIDFEGREDVPEDLSQLDIVLRSSTGEVSQGLVQRNPETGGPRLAFTFDPQE CCCCCEEEEEECCCCCCCHHHHHHHEEEEECCCCHHHHHHHHCCCCCCCCEEEEEECCCC ADLVEFRAQLRLQDAPFTEIWLYRWTRA CHHHHHHHHHEECCCCCCEEEEEEEECC >Mature Secondary Structure MLRRELLKSLVAVATLRPTVLAAQEPGLQTGAATAFDAQMVTARAKALAEKPYAPRPLIP CCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC ESWRNLSYDQYRKIWFDGRNALWENTDRPQRVDVFPPGLYFPQPVEINVVENGTARPLQF HHHHCCCHHHHHEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCCCCEEE DMGVFDSTDKFPDVEIDETLGYSGLRLRAELEQPGIFQEYAVFQGASYFRGIGTGETYGL ECCCCCCCCCCCCCCHHHHCCCCCEEEEEECCCCCCHHHHHHHCCCHHHCCCCCCCCCCC SARGLALKTADPEGEEFPDFTAFWLETPQPGAPDVVLHALLDGPSCTGAYRFVITHGETL CCCCEEEECCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCEEEEEEECCCEE TMQVEAEIFARETLTHIGIAPLTSMFLFDATMRERFSDFRPAVHDSDGLMIHNGAGETIW EEEEEHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHH RPLANPKNLQISAFVDNNPRGFGLMQRARAFSDFADLEALYHNRPALWVTPGEGWGPGAV HCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEE TLVEIPADLEIYDNIVSYWRPAAPLPAGESHKMSYRLDWADDPAPRTGMPLRVRDTAMGA EEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEECCCCCC RPEGGIVVAIDFEGREDVPEDLSQLDIVLRSSTGEVSQGLVQRNPETGGPRLAFTFDPQE CCCCCEEEEEECCCCCCCHHHHHHHEEEEECCCCHHHHHHHHCCCCCCCCEEEEEECCCC ADLVEFRAQLRLQDAPFTEIWLYRWTRA CHHHHHHHHHEECCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA