Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is opgH [H]

Identifier: 110678972

GI number: 110678972

Start: 1601464

End: 1603356

Strand: Reverse

Name: opgH [H]

Synonym: RD1_1668

Alternate gene names: 110678972

Gene position: 1603356-1601464 (Counterclockwise)

Preceding gene: 110678973

Following gene: 110678966

Centisome position: 38.79

GC content: 62.97

Gene sequence:

>1893_bases
ATGAGCGACAACGGCAAAACCGCCTTCATGGCAATGCCCCGGCGCGCCCCGCTTGAGATGATCGCGCAGGACTTTGGCCG
CCAGCCGGTCCACCATGCGCCTGCGCCGGACCGATCCGGAACCTCATTCTACTGGCGTCTTGCGCTTTTCGTGCCCGCAT
TGATCGGCACCGTGCTGTTGATGCGCGGCATCTACGGATGGTTTTCGGAAACCGGCATGGCGGGCCTTGAATGGTTCCTG
CTCAGCCTGATTGGCCTGACGTTCATATGGGTCAGCCTCTCAGTCAGCACGATTGGCATCGCCCTTGCTGGCCTGTTGGC
GCGCGCCAGTGACGCGCAGCGTGTCAAAAGGGACGCAGCGCCCATGGATGTTGCCTTGCTGATGCCGATCTACAACGAAG
CCACCAGCGATGTTTTCGGCAACGCGGCGGCGATGCTGGATGATCTGGCCCGCCAGAAAGCCCACCACCGTTATACGTTG
TTCATCCTGTCCGACACGCGCGACCCACAAACCGCTGCGCGGGAAGAGCGCGCCTATGGCCTGCTGCAAGCCACGGCCCC
TGCGGGCATCGGTGTGTATTACCGCCGCCGGGCCGAGAACACCGACAAGAAAGTCGGCAATCTGATGGACTGGATCACGG
GCTGGGGTGCGGCGCATGACGCGATGGTTGTGCTGGACGCGGATAGTCTGATGACGGGACAGGCCATCGACCGCCTCGCC
TATGAACTCAGCGCGGACCCGCAGGCCGCGTTGATCCAGACATGCCCGGTTCTGATCGGAGCGGAGACGCTTTTTGCGCG
CCTGCAGCAGTTTTCAAACATCGCCTATGGCTGGTTGATGTCCGAAGGTCTGGCCAACTGGGCGAGAACTGAGGGCAATT
ACTGGGGCCACAACGCGATCATTCGCACCCGCGCTTTCGCTGCCTGCGCCGGGTTGCCACGTCTGGCGCGCCGGGGGGGA
CGTTCAGACCTGATATTCAGCCATGATTTCGTCGAAGCGGGCCTTTTGCGGCGCGCAGGCTGGCGTGTGCGTTTCATGCC
GCGCCTGACCGGCAGCTTTGAAGAGACGCCCGGCACGCTGATCGATTATGTGCTGCGCGATCAACGCTGGTGTCGGGGCA
ACCTGCAACACCTGCGGCTGCTGGGCACTGCCGGGCTGCACCCTGTCTCACGGTTCCACCTGCTGCACGGCGCGGTCAGT
TATTTGCTGTCACCCGCATGGTTCGTGCTGCTCATCGTGTGGTCTTTGCTGGGCAAGGACCGCGATACCAATGTGATCCG
CTACTTCAACGAGGCCAATCCGCTGTTTCCCGACTGGCCGCCCGCCATGAGCCACATCGATTCCGCAGTCTTTCTGGTGA
TCATGTATGCCATGCTGCTCACCCCCAAACTGGTGGGGGCCGGCATCATCGCCACGCATCCCAAGGCCACGCGTCTTTAT
GGGGGGCGACGTGCCTTCCTGTCGGCCTTTGGGGTCGAGGTGTTCTTGTCCATCGCCTACGCCCCGATCCTGATGATCCA
GCAAACGCGCGCTGTCGTGCGCACGGCTATCGGGCGCGAGATGACATGGGCGGCACAGAACCGCACGGCGACGGCCTATC
CGCTCAGGGACCTGTTGCGGTTTCACTGGATGGAAACAGTCATCGGTCTCGTGCTGACGGCGGGTCTTTTGTCGGGTCTG
GTGTCCCTGTGGCTGATCCCGATTGCCGCCAGCCTGCTGTTGGCCGTACCGCTGTCTGCTGCCAGTGCCTTGCCCGTCGC
GCGGTATCTGCCGGGCCCGCTGCGCATGCACAGCCCGCTCACGCTGCGCGAACCGGGCATCGTGCAGAATGCCCGGCGTA
AACGGCTACAGCTTCTGGCGGTTCTTGACCGGCCCCATCACGCGGCGGAATAG

Upstream 100 bases:

>100_bases
CTTTTGACCCGCAAGAAGCCGATCTGGTGGAATTCCGTGCCCAGTTGCGCCTGCAGGACGCGCCTTTCACAGAAATCTGG
CTTTATCGCTGGACACGCGC

Downstream 100 bases:

>100_bases
CGCCAAAGCGTCATGCGGAAAAGCTGAACCACGTAACGCTGCCTGAAATTAAGGATTTCAACGCGTTACGTGATACTTTA
CGTTTCAGACTTTCCGTCAG

Product: glucosyltransferase MdoH

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 630; Mature: 629

Protein sequence:

>630_residues
MSDNGKTAFMAMPRRAPLEMIAQDFGRQPVHHAPAPDRSGTSFYWRLALFVPALIGTVLLMRGIYGWFSETGMAGLEWFL
LSLIGLTFIWVSLSVSTIGIALAGLLARASDAQRVKRDAAPMDVALLMPIYNEATSDVFGNAAAMLDDLARQKAHHRYTL
FILSDTRDPQTAAREERAYGLLQATAPAGIGVYYRRRAENTDKKVGNLMDWITGWGAAHDAMVVLDADSLMTGQAIDRLA
YELSADPQAALIQTCPVLIGAETLFARLQQFSNIAYGWLMSEGLANWARTEGNYWGHNAIIRTRAFAACAGLPRLARRGG
RSDLIFSHDFVEAGLLRRAGWRVRFMPRLTGSFEETPGTLIDYVLRDQRWCRGNLQHLRLLGTAGLHPVSRFHLLHGAVS
YLLSPAWFVLLIVWSLLGKDRDTNVIRYFNEANPLFPDWPPAMSHIDSAVFLVIMYAMLLTPKLVGAGIIATHPKATRLY
GGRRAFLSAFGVEVFLSIAYAPILMIQQTRAVVRTAIGREMTWAAQNRTATAYPLRDLLRFHWMETVIGLVLTAGLLSGL
VSLWLIPIAASLLLAVPLSAASALPVARYLPGPLRMHSPLTLREPGIVQNARRKRLQLLAVLDRPHHAAE

Sequences:

>Translated_630_residues
MSDNGKTAFMAMPRRAPLEMIAQDFGRQPVHHAPAPDRSGTSFYWRLALFVPALIGTVLLMRGIYGWFSETGMAGLEWFL
LSLIGLTFIWVSLSVSTIGIALAGLLARASDAQRVKRDAAPMDVALLMPIYNEATSDVFGNAAAMLDDLARQKAHHRYTL
FILSDTRDPQTAAREERAYGLLQATAPAGIGVYYRRRAENTDKKVGNLMDWITGWGAAHDAMVVLDADSLMTGQAIDRLA
YELSADPQAALIQTCPVLIGAETLFARLQQFSNIAYGWLMSEGLANWARTEGNYWGHNAIIRTRAFAACAGLPRLARRGG
RSDLIFSHDFVEAGLLRRAGWRVRFMPRLTGSFEETPGTLIDYVLRDQRWCRGNLQHLRLLGTAGLHPVSRFHLLHGAVS
YLLSPAWFVLLIVWSLLGKDRDTNVIRYFNEANPLFPDWPPAMSHIDSAVFLVIMYAMLLTPKLVGAGIIATHPKATRLY
GGRRAFLSAFGVEVFLSIAYAPILMIQQTRAVVRTAIGREMTWAAQNRTATAYPLRDLLRFHWMETVIGLVLTAGLLSGL
VSLWLIPIAASLLLAVPLSAASALPVARYLPGPLRMHSPLTLREPGIVQNARRKRLQLLAVLDRPHHAAE
>Mature_629_residues
SDNGKTAFMAMPRRAPLEMIAQDFGRQPVHHAPAPDRSGTSFYWRLALFVPALIGTVLLMRGIYGWFSETGMAGLEWFLL
SLIGLTFIWVSLSVSTIGIALAGLLARASDAQRVKRDAAPMDVALLMPIYNEATSDVFGNAAAMLDDLARQKAHHRYTLF
ILSDTRDPQTAAREERAYGLLQATAPAGIGVYYRRRAENTDKKVGNLMDWITGWGAAHDAMVVLDADSLMTGQAIDRLAY
ELSADPQAALIQTCPVLIGAETLFARLQQFSNIAYGWLMSEGLANWARTEGNYWGHNAIIRTRAFAACAGLPRLARRGGR
SDLIFSHDFVEAGLLRRAGWRVRFMPRLTGSFEETPGTLIDYVLRDQRWCRGNLQHLRLLGTAGLHPVSRFHLLHGAVSY
LLSPAWFVLLIVWSLLGKDRDTNVIRYFNEANPLFPDWPPAMSHIDSAVFLVIMYAMLLTPKLVGAGIIATHPKATRLYG
GRRAFLSAFGVEVFLSIAYAPILMIQQTRAVVRTAIGREMTWAAQNRTATAYPLRDLLRFHWMETVIGLVLTAGLLSGLV
SLWLIPIAASLLLAVPLSAASALPVARYLPGPLRMHSPLTLREPGIVQNARRKRLQLLAVLDRPHHAAE

Specific function: Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs) [H]

COG id: COG2943

COG function: function code M; Membrane glycosyltransferase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family. OpgH subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787287, Length=515, Percent_Identity=35.7281553398058, Blast_Score=277, Evalue=2e-75,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 69737; Mature: 69606

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDNGKTAFMAMPRRAPLEMIAQDFGRQPVHHAPAPDRSGTSFYWRLALFVPALIGTVLL
CCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
MRGIYGWFSETGMAGLEWFLLSLIGLTFIWVSLSVSTIGIALAGLLARASDAQRVKRDAA
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCC
PMDVALLMPIYNEATSDVFGNAAAMLDDLARQKAHHRYTLFILSDTRDPQTAAREERAYG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHHHH
LLQATAPAGIGVYYRRRAENTDKKVGNLMDWITGWGAAHDAMVVLDADSLMTGQAIDRLA
HHEECCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHH
YELSADPQAALIQTCPVLIGAETLFARLQQFSNIAYGWLMSEGLANWARTEGNYWGHNAI
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
IRTRAFAACAGLPRLARRGGRSDLIFSHDFVEAGLLRRAGWRVRFMPRLTGSFEETPGTL
HHHHHHHHHHCCHHHHHCCCCCCEEEEHHHHHHHHHHHCCCCEEEEHHHCCCCCCCCHHH
IDYVLRDQRWCRGNLQHLRLLGTAGLHPVSRFHLLHGAVSYLLSPAWFVLLIVWSLLGKD
HHHHHHCCHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RDTNVIRYFNEANPLFPDWPPAMSHIDSAVFLVIMYAMLLTPKLVGAGIIATHPKATRLY
CCCCHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHC
GGRRAFLSAFGVEVFLSIAYAPILMIQQTRAVVRTAIGREMTWAAQNRTATAYPLRDLLR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHCCCCCCHHHHHHHHH
FHWMETVIGLVLTAGLLSGLVSLWLIPIAASLLLAVPLSAASALPVARYLPGPLRMHSPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCC
TLREPGIVQNARRKRLQLLAVLDRPHHAAE
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SDNGKTAFMAMPRRAPLEMIAQDFGRQPVHHAPAPDRSGTSFYWRLALFVPALIGTVLL
CCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
MRGIYGWFSETGMAGLEWFLLSLIGLTFIWVSLSVSTIGIALAGLLARASDAQRVKRDAA
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCC
PMDVALLMPIYNEATSDVFGNAAAMLDDLARQKAHHRYTLFILSDTRDPQTAAREERAYG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHHHH
LLQATAPAGIGVYYRRRAENTDKKVGNLMDWITGWGAAHDAMVVLDADSLMTGQAIDRLA
HHEECCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHH
YELSADPQAALIQTCPVLIGAETLFARLQQFSNIAYGWLMSEGLANWARTEGNYWGHNAI
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
IRTRAFAACAGLPRLARRGGRSDLIFSHDFVEAGLLRRAGWRVRFMPRLTGSFEETPGTL
HHHHHHHHHHCCHHHHHCCCCCCEEEEHHHHHHHHHHHCCCCEEEEHHHCCCCCCCCHHH
IDYVLRDQRWCRGNLQHLRLLGTAGLHPVSRFHLLHGAVSYLLSPAWFVLLIVWSLLGKD
HHHHHHCCHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RDTNVIRYFNEANPLFPDWPPAMSHIDSAVFLVIMYAMLLTPKLVGAGIIATHPKATRLY
CCCCHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHC
GGRRAFLSAFGVEVFLSIAYAPILMIQQTRAVVRTAIGREMTWAAQNRTATAYPLRDLLR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHCCCCCCHHHHHHHHH
FHWMETVIGLVLTAGLLSGLVSLWLIPIAASLLLAVPLSAASALPVARYLPGPLRMHSPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCC
TLREPGIVQNARRKRLQLLAVLDRPHHAAE
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA