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The map label for this gene is ycgI [H]

Identifier: 110678939

GI number: 110678939

Start: 1571435

End: 1572280

Strand: Direct

Name: ycgI [H]

Synonym: RD1_1633

Alternate gene names: 110678939

Gene position: 1571435-1572280 (Clockwise)

Preceding gene: 110678938

Following gene: 110678942

Centisome position: 38.02

GC content: 61.47

Gene sequence:

>846_bases
GTGAGCGAACCAAAGGATGCCGATGCCCGCCGCGCCGTCAAGCCGGTGATCTGCTACCCGGTCGAGACGCTGCCCGCACC
GGATATGGCGCTCTACACGCGTGCGCGCGACAGTCTGAGCAAAGTCGATGAGGTGCTCGTTCCCGCACGCGATGCACGGT
GTTTTTCGGTGCCGCGCGGTCATTTCTTTCGTATCACTTCGGTGGAGGGGGCACAGGTTGGCGATCTCAACCTGCATAAC
GCGCAGGATGTGTCCGAGCGGTTTTATTCCGGAAAGACACGCGCCCTGCATGGCACGCATCTGACGACAGGCCAGCGCAT
GTGGTCCAGTTTCCCGCACCTGCGTCCGATGGCGACGATCACGCAGGACACATTGGGCTGGTACGGCATCGATCCTTTTG
GCGGGTCGGTGCACGATGTGATCGGCACCCGCTGCGACCCTTATACCCATGCGCTGTTGTCCGACGGGGGGCAGTATCAC
CATTGCTGCCATTCGAACCTGACGCGCGCCCTCTCCGATCACCTCGGGGTGTCGCGCGCTGAGGCGGAGCCTTTGGTGCA
TGATGTGCTCAACGTGTTTATGTGCACAGGGTTTACCCGGGACACAGGCCAGTATTTCATGAAGGCCAGCCCGGTGCGGC
CCGGTGATTTTATCGAGTTTTTCGCCGAGATCGACCTTTTGGGCAATCTGTCGGCCTGCCCGGGTGGGGATTGCTCCTCC
GAGCATTCAAGCGATGCTGCGCCCTGCCATCCCCTGCTGGTGGAGGTGTTCAAACCCGCGCCGAAGGCTTTGGCAGGTTG
GAACCCACCGGCAGCGAACAGCTATGACCGGACCCATGGTCCATAG

Upstream 100 bases:

>100_bases
GACGAAATCGCCCCCAAATCTCTGCCTGTCAGACCGTGTGTGACCCCGCAGTTTAAACCTTAACGACCGTGTCATGACCC
AAACCCAAAGGAACAGAAAA

Downstream 100 bases:

>100_bases
TCTCAGGCGAAGGCGGCCTCCAGCGCGATTTCGACCATATCGCCAAAGGTCTGTTCGCGGTCCTCAGCCGGGAGCGCCTC
GCCGGTCTGCAGGTGGTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MSEPKDADARRAVKPVICYPVETLPAPDMALYTRARDSLSKVDEVLVPARDARCFSVPRGHFFRITSVEGAQVGDLNLHN
AQDVSERFYSGKTRALHGTHLTTGQRMWSSFPHLRPMATITQDTLGWYGIDPFGGSVHDVIGTRCDPYTHALLSDGGQYH
HCCHSNLTRALSDHLGVSRAEAEPLVHDVLNVFMCTGFTRDTGQYFMKASPVRPGDFIEFFAEIDLLGNLSACPGGDCSS
EHSSDAAPCHPLLVEVFKPAPKALAGWNPPAANSYDRTHGP

Sequences:

>Translated_281_residues
MSEPKDADARRAVKPVICYPVETLPAPDMALYTRARDSLSKVDEVLVPARDARCFSVPRGHFFRITSVEGAQVGDLNLHN
AQDVSERFYSGKTRALHGTHLTTGQRMWSSFPHLRPMATITQDTLGWYGIDPFGGSVHDVIGTRCDPYTHALLSDGGQYH
HCCHSNLTRALSDHLGVSRAEAEPLVHDVLNVFMCTGFTRDTGQYFMKASPVRPGDFIEFFAEIDLLGNLSACPGGDCSS
EHSSDAAPCHPLLVEVFKPAPKALAGWNPPAANSYDRTHGP
>Mature_280_residues
SEPKDADARRAVKPVICYPVETLPAPDMALYTRARDSLSKVDEVLVPARDARCFSVPRGHFFRITSVEGAQVGDLNLHNA
QDVSERFYSGKTRALHGTHLTTGQRMWSSFPHLRPMATITQDTLGWYGIDPFGGSVHDVIGTRCDPYTHALLSDGGQYHH
CCHSNLTRALSDHLGVSRAEAEPLVHDVLNVFMCTGFTRDTGQYFMKASPVRPGDFIEFFAEIDLLGNLSACPGGDCSSE
HSSDAAPCHPLLVEVFKPAPKALAGWNPPAANSYDRTHGP

Specific function: Unknown

COG id: COG3665

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Drosophila melanogaster, GI21355119, Length=249, Percent_Identity=50.6024096385542, Blast_Score=239, Evalue=2e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018959 [H]

Pfam domain/function: PF09347 DUF1989 [H]

EC number: NA

Molecular weight: Translated: 30747; Mature: 30616

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEPKDADARRAVKPVICYPVETLPAPDMALYTRARDSLSKVDEVLVPARDARCFSVPRG
CCCCCCCHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCC
HFFRITSVEGAQVGDLNLHNAQDVSERFYSGKTRALHGTHLTTGQRMWSSFPHLRPMATI
CEEEEEECCCCEECCCCCCCHHHHHHHHHCCCCCEECCCCCCHHHHHHHCCCCCCHHHHH
TQDTLGWYGIDPFGGSVHDVIGTRCDPYTHALLSDGGQYHHCCHSNLTRALSDHLGVSRA
HHHHCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHH
EAEPLVHDVLNVFMCTGFTRDTGQYFMKASPVRPGDFIEFFAEIDLLGNLSACPGGDCSS
HHHHHHHHHHHHHHHCCCCCCCCHHHEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC
EHSSDAAPCHPLLVEVFKPAPKALAGWNPPAANSYDRTHGP
CCCCCCCCHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SEPKDADARRAVKPVICYPVETLPAPDMALYTRARDSLSKVDEVLVPARDARCFSVPRG
CCCCCCHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCC
HFFRITSVEGAQVGDLNLHNAQDVSERFYSGKTRALHGTHLTTGQRMWSSFPHLRPMATI
CEEEEEECCCCEECCCCCCCHHHHHHHHHCCCCCEECCCCCCHHHHHHHCCCCCCHHHHH
TQDTLGWYGIDPFGGSVHDVIGTRCDPYTHALLSDGGQYHHCCHSNLTRALSDHLGVSRA
HHHHCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHH
EAEPLVHDVLNVFMCTGFTRDTGQYFMKASPVRPGDFIEFFAEIDLLGNLSACPGGDCSS
HHHHHHHHHHHHHHHCCCCCCCCHHHEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC
EHSSDAAPCHPLLVEVFKPAPKALAGWNPPAANSYDRTHGP
CCCCCCCCHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 10568751 [H]