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The map label for this gene is nirC [H]

Identifier: 110678874

GI number: 110678874

Start: 1490638

End: 1490955

Strand: Direct

Name: nirC [H]

Synonym: RD1_1567

Alternate gene names: 110678874

Gene position: 1490638-1490955 (Clockwise)

Preceding gene: 110678873

Following gene: 110678875

Centisome position: 36.07

GC content: 61.95

Gene sequence:

>318_bases
ATGGCTAGGGCGGTCGCATTGCTGGCGATATCTGTGCTTGCCGCGCCCTCTCTCGCTGCCGAAGCACTGCCGCAAGCCGA
ACAGGACCGCCTTGCGCATTTCGTGCAACAGGATTGCGGGTCATGCCATGGTCTCAAGATGACCGGGGGTCTTGGCAGCC
CGATCACGCCGGAGGCCCTTGAGGGGCACACGGTCGATGGTCTGACGTCGATCATTCTGGATGGCATTCCGGGGACGGCC
ATGCCGCCCTGGCGTCCGCTCTTAACCGAAATCGAGGCACAATGGATTGCCGAATACCTGCTGGAGATCAGCCCGTGA

Upstream 100 bases:

>100_bases
GTTCTGTTCATCGTGGGCCGCGTCGTCACCCTGATCGACAGCGAGGACAGCACGGCGGCGGACACGCTTCTCCGGGCCCC
CGAACTGCAGCGGGTGCTGC

Downstream 100 bases:

>100_bases
TGCGCCTGATGAGTTTCCTGTCCCTCTTGTTGGTCCTTGCCCTGCCCGCCACAGCCGAGGTGGAGGTCCACGCCACGGGC
GATCTGGGCGTCGTGATTGA

Product: cytochrome c (c55X)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 104

Protein sequence:

>105_residues
MARAVALLAISVLAAPSLAAEALPQAEQDRLAHFVQQDCGSCHGLKMTGGLGSPITPEALEGHTVDGLTSIILDGIPGTA
MPPWRPLLTEIEAQWIAEYLLEISP

Sequences:

>Translated_105_residues
MARAVALLAISVLAAPSLAAEALPQAEQDRLAHFVQQDCGSCHGLKMTGGLGSPITPEALEGHTVDGLTSIILDGIPGTA
MPPWRPLLTEIEAQWIAEYLLEISP
>Mature_104_residues
ARAVALLAISVLAAPSLAAEALPQAEQDRLAHFVQQDCGSCHGLKMTGGLGSPITPEALEGHTVDGLTSIILDGIPGTAM
PPWRPLLTEIEAQWIAEYLLEISP

Specific function: Monoheme c-type cytochrome [H]

COG id: COG2010

COG function: function code C; Cytochrome c, mono- and diheme variants

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11025; Mature: 10894

Theoretical pI: Translated: 4.21; Mature: 4.21

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARAVALLAISVLAAPSLAAEALPQAEQDRLAHFVQQDCGSCHGLKMTGGLGSPITPEAL
CCHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHC
EGHTVDGLTSIILDGIPGTAMPPWRPLLTEIEAQWIAEYLLEISP
CCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ARAVALLAISVLAAPSLAAEALPQAEQDRLAHFVQQDCGSCHGLKMTGGLGSPITPEAL
CHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHC
EGHTVDGLTSIILDGIPGTAMPPWRPLLTEIEAQWIAEYLLEISP
CCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7747927 [H]